chr2 : 174,053,124 174,054,219
1,095 bp 132 TFs 2 linked genes
This 1.1 kb open chromatin element is linked to SP3 and OLA1 and is bound by 132 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SP3 88.2 kb Distal Multiome
OLA1 195.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:174,048,124 – 174,059,219
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
132 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 399 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 747 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 597 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 317 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 158 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 493 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 675 bp overlap
BRD2 3 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 466 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 194 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 333 bp overlap
BRD3 1 dataset
ChIP A-549 GSE119863.BRD3.A-549 1016 bp overlap
BRD4 7 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 394 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 266 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 551 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 172 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 424 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 381 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 981 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 121 bp overlap
CEBPB 1 dataset
ChIP A-549 ENCSR000BUB.CEBPB.A-549 130 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 182 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 230 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 275 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 537 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 492 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 368 bp overlap
DMAP1 2 datasets
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 293 bp overlap
ChIP HepG2 ENCFF247MSU 391 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 233 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 242 bp overlap
ERG 3 datasets
ChIP SKNO-1 GSE23730.ERG.SKNO-1 249 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 155 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 135 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 393 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 209 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
EZH2 4 datasets
ChIP GM23338 ENCFF613YON 180 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 94 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 241 bp overlap
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 155 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 322 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 288 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 297 bp overlap
ChIP DE DE-GATA4-2 539 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 505 bp overlap
ChIP DE DE-GATA6-2 643 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 615 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 448 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 1061 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 726 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 651 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 262 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 356 bp overlap
GRHL2 3 datasets
ChIP HBE GSE46194.GRHL2.HBE 166 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 216 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 291 bp overlap
GTF3A 1 dataset
ChIP HepG2 ENCFF268DGX 623 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 248 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 255 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 207 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 144 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 354 bp overlap
HNF4A 3 datasets
ChIP GP5D GSE51234.HNF4A.GP5D 382 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 217 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 312 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 205 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 717 bp overlap
ChIP K562 ENCFF348IBL 382 bp overlap
ChIP K562 ENCFF771OHZ 400 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 195 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 163 bp overlap
JUN 6 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 152 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 261 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 331 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 514 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 260 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 591 bp overlap
KDM5B 2 datasets
ChIP SUM159 GSE46055.KDM5B.SUM159 156 bp overlap
ChIP SUM185 GSE46055.KDM5B.SUM185 126 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 494 bp overlap
MED1 3 datasets
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 467 bp overlap
ChIP SGBS GSE64233.MED1.SGBS 505 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 455 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 243 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 251 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 561 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 82 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 161 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 193 bp overlap
NR2C1 1 dataset
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
NR2E3 2 datasets
ChIP A549 ENCFF833WDR 351 bp overlap
ChIP A549 ENCFF833WDR 351 bp overlap
Nr1H2 1 dataset
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 171 bp overlap
PCBP2 4 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 619 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 579 bp overlap
ChIP HepG2 ENCFF033VWK 405 bp overlap
ChIP HepG2 ENCFF033VWK 405 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 292 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 278 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 665 bp overlap
POLR2A 1 dataset
ChIP A549 ENCFF748RAW 311 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 210 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 908 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 404 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 133 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 168 bp overlap
PPARG 2 datasets
ChIP ASC GSE21366.PPARG.ASC 442 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 370 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 421 bp overlap
PRDM10 2 datasets
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 174 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 139 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 139 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 543 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 469 bp overlap
REST 3 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 283 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 260 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 97 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 725 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 553 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 494 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 191 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 476 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 232 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 706 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 284 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 916 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 574 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 372 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 602 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 553 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 648 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 704 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
ChIP BG03 GSE36578.SMAD3.BG03 94 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 168 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 468 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 245 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 1067 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 431 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 194 bp overlap
SMARCB1 2 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 250 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 240 bp overlap
SMARCC1 4 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 315 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 488 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 176 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 341 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 241 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 743 bp overlap
SP1 4 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 298 bp overlap
ChIP A-549 ENCSR000BPE.SP1.A-549 83 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 236 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 6 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 234 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 123 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 158 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 289 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 251 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 366 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 298 bp overlap
SUZ12 1 dataset
ChIP WA01 ENCSR000ATS.SUZ12.WA01 281 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 327 bp overlap
TAF1 1 dataset
ChIP A-549 ENCSR000BPF.TAF1.A-549 360 bp overlap
TARDBP 1 dataset
ChIP K-562 GSE120104.TARDBP.K-562 179 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 250 bp overlap
TCF12 3 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 428 bp overlap
ChIP A-549 ENCSR000BQQ.TCF12.A-549 189 bp overlap
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 256 bp overlap
TCF7L2 1 dataset
ChIP LNCaP GSE51621.TCF7L2.LNCaP 231 bp overlap
TEAD1 1 dataset
ChIP CCLP1 GSE62272.TEAD1.CCLP1 173 bp overlap
TEAD4 2 datasets
ChIP BJ_fibroblast GSE114367.TEAD4.BJ_fibroblast 180 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 268 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif ES_0h ES_0h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 2 datasets
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 533 bp overlap
TFAP2E 1 dataset
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
TP53 2 datasets
ChIP H9 GSE39912.TP53.H9 225 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 399 bp overlap
TP63 6 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 274 bp overlap
ChIP breast-organoid GSE113909.TP63.breast-organoid 117 bp overlap
ChIP foreskin GSE126390.TP63.foreskin 156 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 216 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 233 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 225 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 472 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
XRCC5 4 datasets
ChIP HepG2 ENCFF330PDO 485 bp overlap
ChIP HepG2 ENCFF330PDO 485 bp overlap
ChIP HepG2 ENCFF680LVJ 481 bp overlap
ChIP HepG2 ENCFF680LVJ 287 bp overlap
YY1 1 dataset
ChIP A-549 ENCSR000BPM.YY1.A-549 218 bp overlap
ZBTB5 1 dataset
ChIP K-562 ENCSR389PWB.ZBTB5.K-562 247 bp overlap
ZNF213 1 dataset
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 269 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 691 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF556 1 dataset
ChIP HepG2 ENCFF008WIK 452 bp overlap
ZNF677 1 dataset
ChIP HEK293 ENCFF220HCQ 277 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap