chr12:122,751,194–122,751,767

chr12 : 122,751,194 – 122,751,767

573 bp 128 TFs 9 linked genes

This 573 bp open chromatin element is linked to 9 target genes and is bound by 128 transcription factors.

Linked Genes

9 genes

Gene	Expression	Dist. to TSS	Distance	Link type
DENR		1.1 kb	Proximal	Proximity
HIP1R		84.1 kb	Distal	Multiome
VPS37B		144.8 kb	Distal	Multiome
ABCB9		215.1 kb	Distal	Multiome
OGFOD2		223.4 kb	Distal	Multiome
KNTC1		224.1 kb	Distal	Multiome
RSRC2		224.4 kb	Distal	Multiome
ARL6IP4		228.9 kb	Distal	Multiome
ZCCHC8		250.4 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

128 transcription factors

ARID1B 1 dataset

ChIP K562 ENCFF938UXQ 383 bp overlap

ARID4B 1 dataset

ChIP HepG2 ENCFF519OXJ 412 bp overlap

ATOH8 1 dataset

ChIP A549 ENCFF772HNB 194 bp overlap

CAVIN1 1 dataset

ChIP K562 ENCFF731YBD 184 bp overlap

CBFA2T2 1 dataset

ChIP K562 ENCFF963TXY 320 bp overlap

CBFA2T3 1 dataset

ChIP K562 ENCFF673OEZ 412 bp overlap

CREB3 1 dataset

ChIP K562 ENCFF985QJI 239 bp overlap

CTBP1 1 dataset

ChIP K562 ENCFF403WPG 358 bp overlap

CXXC5 2 datasets

ChIP K562 ENCFF497CZN 478 bp overlap

ChIP K562 ENCFF497CZN 409 bp overlap

Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap

DMBX1 1 dataset

ChIP K562 ENCFF972HXB 217 bp overlap

ChIP K562 ENCFF775HUO 275 bp overlap

Dmbx1 1 dataset

Motif ES_0h ES_0h-Dmbx1_MA0883.2 10 bp overlap

ChIP A549 ENCFF352AOI 97 bp overlap

ERF::FIGLA 1 dataset

Motif ES_0h ES_0h-ERFFIGLA_MA1934.2 13 bp overlap

Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap

FOXA1 2 datasets

ChIP HepG2 ENCFF207NVJ 229 bp overlap

ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 122 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 553 bp overlap

ChIP DE DE-FOXA2-2 416 bp overlap

FOXK1 2 datasets

ChIP WTC11 ENCFF875IGU 384 bp overlap

ChIP WTC11 ENCFF875IGU 160 bp overlap

FOXS1 1 dataset

ChIP A549 ENCFF870VDS 127 bp overlap

GATA2 2 datasets

ChIP K562 ENCFF088XQT 411 bp overlap

ChIP K562 ENCFF544PCK 251 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 573 bp overlap

ChIP DE DE-GATA4-2 573 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 573 bp overlap

ChIP DE DE-GATA6-2 573 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 520 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 573 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 573 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap

Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap

Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap

HDAC1 2 datasets

ChIP K562 ENCFF928TKZ 454 bp overlap

ChIP K562 ENCFF968WBH 193 bp overlap

HDAC2 1 dataset

ChIP K562 ENCFF744ALD 219 bp overlap

HDAC8 1 dataset

ChIP K562 ENCFF784HCJ 96 bp overlap

ChIP A549 ENCFF588UHP 148 bp overlap

HMBOX1 1 dataset

ChIP K562 ENCFF055GAZ 391 bp overlap

HMG20A 1 dataset

ChIP K562 ENCFF840WDB 478 bp overlap

HMGA2 1 dataset

ChIP A549 ENCFF624CAQ 179 bp overlap

HNF1B 1 dataset

ChIP PDAC GSE64557.HNF1B.PDAC 191 bp overlap

HOXA3 1 dataset

ChIP HepG2 ENCFF374TCI 330 bp overlap

HOXB13 1 dataset

ChIP A549 ENCFF870NOA 193 bp overlap

HOXB5 1 dataset

ChIP A549 ENCFF891VDO 243 bp overlap

ChIP K562 ENCFF170RNI 300 bp overlap

IKZF1 2 datasets

ChIP K562 ENCFF348IBL 407 bp overlap

ChIP K562 ENCFF771OHZ 415 bp overlap

IKZF2 1 dataset

Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap

ChIP K562 ENCFF346PQL 186 bp overlap

Ikzf3 1 dataset

Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 573 bp overlap

ChIP K562 ENCFF175ZTN 573 bp overlap

KDM1A 3 datasets

ChIP K562 ENCFF128TYE 378 bp overlap

ChIP K562 ENCFF133OLU 385 bp overlap

ChIP K562 ENCFF934ZRG 311 bp overlap

KLF16 1 dataset

ChIP K562 ENCFF464PIV 345 bp overlap

ChIP K562 ENCFF340MHH 197 bp overlap

LCORL 1 dataset

ChIP HepG2 ENCFF017FTI 425 bp overlap

LIN54 1 dataset

ChIP HepG2 ENCFF662XDE 514 bp overlap

Motif ES_0h ES_0h-MAF_MA1520.2 13 bp overlap

MAF::NFE2 1 dataset

Motif ES_0h ES_0h-MAFNFE2_MA0501.2 11 bp overlap

Motif ES_0h ES_0h-MAFA_MA1521.2 13 bp overlap

MAFG::NFE2L1 1 dataset

Motif ES_0h ES_0h-MAFGNFE2L1_MA0089.3 11 bp overlap

Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap

ChIP H1 ENCFF914VQY 357 bp overlap

ChIP K562 ENCFF398VJM 471 bp overlap

ChIP WTC11 ENCFF223QFY 451 bp overlap

MEIS1 1 dataset

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

ChIP K562 ENCFF140CEX 361 bp overlap

MIXL1 1 dataset

ChIP HepG2 ENCFF817YFO 308 bp overlap

ChIP K562 ENCFF820IGH 555 bp overlap

ChIP K562 ENCFF820IGH 355 bp overlap

ChIP K562 ENCFF880VZB 112 bp overlap

Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap

MYBL2 1 dataset

Motif ES_0h ES_0h-MYBL2_MA0777.1 15 bp overlap

Motif ES_0h ES_0h-Mafg_MA0659.4 12 bp overlap

NCOA1 2 datasets

ChIP K562 ENCFF962VHQ 376 bp overlap

ChIP K562 ENCFF962VHQ 447 bp overlap

NCOR1 3 datasets

ChIP K562 ENCFF788MPU 402 bp overlap

ChIP K562 ENCFF788MPU 390 bp overlap

ChIP K562 ENCFF866HRM 257 bp overlap

NFE2L1 1 dataset

ChIP WTC11 ENCFF644BPU 377 bp overlap

ChIP K562 ENCFF167YID 380 bp overlap

ChIP K562 ENCFF268WFF 291 bp overlap

NR4A1 1 dataset

ChIP K562 ENCFF998LHF 281 bp overlap

Nfe2l2 1 dataset

Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap

Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap

ChIP WTC11 ENCFF634NAO 245 bp overlap

Motif ES_0h ES_0h-PAX3_MA0780.1 10 bp overlap

ChIP A549 ENCFF475JCE 167 bp overlap

PHOX2A 1 dataset

Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap

PITX1 2 datasets

Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap

ChIP HepG2 ENCFF468QTQ 338 bp overlap

PITX2 1 dataset

Motif ES_0h ES_0h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap

ChIP K562 ENCFF801LKH 430 bp overlap

POLR2A 5 datasets

ChIP GM18951 ENCFF079KKO 462 bp overlap

ChIP GM23338 ENCFF450WCS 475 bp overlap

ChIP H1 ENCFF566JSR 258 bp overlap

ChIP K562 ENCFF514URW 384 bp overlap

ChIP Raji ENCFF613VGX 360 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 573 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 573 bp overlap

PRDM1 1 dataset

ChIP A549 ENCFF012KDW 132 bp overlap

PROP1 1 dataset

Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap

PTTG1 1 dataset

ChIP K562 ENCFF017KRM 151 bp overlap

Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap

Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap

RARA::RXRG 1 dataset

Motif ES_0h ES_0h-RARARXRG_MA1149.2 17 bp overlap

RCOR1 1 dataset

ChIP K562 ENCFF216EEJ 297 bp overlap

ChIP K562 ENCFF892SPR 266 bp overlap

ChIP K562 ENCFF430APM 231 bp overlap

RHOXF1 1 dataset

Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap

ChIP K562 ENCFF653BQJ 209 bp overlap

Motif ES_0h ES_0h-Rarb_MA0858.1 17 bp overlap

SAP130 1 dataset

ChIP HepG2 ENCFF892EHZ 382 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 539 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 524 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 573 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 418 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 389 bp overlap

SMAD4 1 dataset

ChIP K562 ENCFF628RBP 469 bp overlap

SMARCA4 3 datasets

ChIP K562 ENCFF316MCJ 359 bp overlap

ChIP K562 ENCFF506JCB 222 bp overlap

ChIP K562 ENCFF506JCB 471 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S10-DE-d1-BAF155-exp1 319 bp overlap

SMARCE1 2 datasets

ChIP K562 ENCFF690CFF 135 bp overlap

ChIP K562 ENCFF690CFF 418 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 251 bp overlap

ChIP K562 ENCFF059YCJ 412 bp overlap

SPDEF 2 datasets

ChIP MCF-7 ENCFF827PZY 292 bp overlap

ChIP MCF-7 ENCFF827PZY 74 bp overlap

STAT3 1 dataset

ChIP MDA-MB-361 GSE152203.STAT3.MDA-MB-361 95 bp overlap

ChIP H1 ENCFF478SZO 375 bp overlap

TAL1 2 datasets

ChIP K562 ENCFF620GMX 350 bp overlap

ChIP K562 ENCFF661CCK 277 bp overlap

TCF12 2 datasets

ChIP K562 ENCFF909RDY 118 bp overlap

ChIP K562 ENCFF931DJY 355 bp overlap

ChIP K562 ENCFF319QZT 229 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 344 bp overlap

TEAD4 1 dataset

ChIP K562 ENCFF673NIK 237 bp overlap

TFAP4::ETV1 1 dataset

Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap

TRERF1 1 dataset

ChIP WTC11 ENCFF113BUM 118 bp overlap

TRIM24 2 datasets

ChIP K562 ENCFF284DKY 381 bp overlap

ChIP K562 ENCFF616RIL 418 bp overlap

ZBTB17 1 dataset

Motif ES_0h ES_0h-ZBTB17_MA2102.1 8 bp overlap

ZBTB40 1 dataset

ChIP K562 ENCFF337GJB 467 bp overlap

ZEB2 2 datasets

ChIP K562 ENCFF795CMH 453 bp overlap

ChIP K562 ENCFF975RXS 367 bp overlap

ChIP K562 ENCFF536AJO 573 bp overlap

ZNF232 2 datasets

ChIP WTC11 ENCFF901BGD 382 bp overlap

ChIP WTC11 ENCFF901BGD 366 bp overlap

ZNF281 1 dataset

ChIP K562 ENCFF594VNM 329 bp overlap

ZNF302 1 dataset

ChIP A549 ENCFF333REI 205 bp overlap

ZNF311 1 dataset

ChIP K562 ENCFF986QSP 154 bp overlap

ZNF410 1 dataset

Motif ES_0h ES_0h-ZNF410_MA0752.2 16 bp overlap

ZNF425 1 dataset

ChIP WTC11 ENCFF359IXT 128 bp overlap

ZNF583 1 dataset

ChIP K562 ENCFF879KXH 249 bp overlap

ZNF592 3 datasets

ChIP GM12878 ENCFF818ABS 159 bp overlap

ChIP K562 ENCFF547OSS 168 bp overlap

ChIP MCF-7 ENCFF315RIM 245 bp overlap

ZNF652 2 datasets

ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 158 bp overlap

ChIP HepG2 ENCFF331VPZ 206 bp overlap

ZNF687 1 dataset

ChIP GM12878 ENCFF233SGE 242 bp overlap

ZSCAN29 1 dataset

ChIP K562 ENCFF797SOU 412 bp overlap