chr12 : 32,016,824 32,017,328
504 bp 159 TFs 4 linked genes
This 504 bp open chromatin element is linked to 4 target genes and is bound by 159 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
RESF1 57.8 kb Distal Multiome
BICD1 89.7 kb Distal Multiome
ENSG00000277342 91.9 kb Distal Multiome
AMN1 288.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:32,011,824 – 32,022,328
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
159 transcription factors
Source
Cell type
AEBP2 1 dataset
ChIP HEK293 ENCFF002GMR 57 bp overlap
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 254 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 245 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 209 bp overlap
BRD4 1 dataset
ChIP CHL-1 GSE95585.BRD4.CHL-1 101 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CEBPG 2 datasets
ChIP K562 ENCFF783ADE 148 bp overlap
ChIP K562 ENCFF783ADE 350 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 450 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 165 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 268 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 131 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 292 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF335XTP 162 bp overlap
ChIP BLaER1 ENCFF364PUR 193 bp overlap
ChIP BLaER1 ENCFF460KDD 82 bp overlap
ChIP BLaER1 ENCFF896HSY 202 bp overlap
DBP 1 dataset
Motif DE_12h DE_12h-DBP_MA0639.2 10 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 150 bp overlap
ChIP hESC GSE17917.EP300.hESC 367 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 63 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 274 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 368 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 139 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 152 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 120 bp overlap
GATA2 5 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 179 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 137 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 137 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 225 bp overlap
ChIP dermal-fibroblast GSE51025.GATA2.dermal-fibroblast 188 bp overlap
GATA3 4 datasets
ChIP Jurkat GSE120063.GATA3.Jurkat 232 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 166 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 184 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 168 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 206 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 186 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 316 bp overlap
ChIP DE DE-GATA4-2 464 bp overlap
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 202 bp overlap
GATA5 1 dataset
Motif DE_12h DE_12h-GATA5_MA0766.3 8 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 307 bp overlap
ChIP DE DE-GATA6-2 303 bp overlap
Motif DE_12h DE_12h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 276 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 293 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 331 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 279 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 311 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 280 bp overlap
GFI1B 1 dataset
ChIP HEK293 ENCFF264FBS 63 bp overlap
GLI2 2 datasets
ChIP HEK293 ENCFF700EUN 64 bp overlap
ChIP HEK293 ENCSR978EQY.GLI2.HEK293 63 bp overlap
Gata3 1 dataset
Motif DE_12h DE_12h-Gata3_MA0037.5 8 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 159 bp overlap
HLF 3 datasets
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 138 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 286 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 477 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 421 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 504 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 456 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
ChIP WA09 GSE105028.KLF4.WA09 211 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 337 bp overlap
MXD4 1 dataset
ChIP WTC11 ENCFF044PLT 195 bp overlap
MYOD1 1 dataset
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 64 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 140 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 347 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 504 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 433 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 270 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 482 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 394 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 363 bp overlap
ChIP hESC GSE20650.NANOG.hESC 317 bp overlap
ChIP hESC GSE18292.NANOG.hESC 301 bp overlap
NFIL3 1 dataset
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
NIPBL 3 datasets
ChIP WA09 GSE105028.NIPBL.WA09 286 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 204 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 214 bp overlap
NKX6-3 1 dataset
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Nkx3-2 1 dataset
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
OVOL3 2 datasets
ChIP HEK293 ENCFF898STB 91 bp overlap
ChIP HEK293 ENCSR768LIO.OVOL3.HEK293 83 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
PKNOX1 1 dataset
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 439 bp overlap
POU5F1 14 datasets
ChIP BG03 GSE21614.POU5F1.BG03 187 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 431 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 504 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 336 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 504 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 299 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 297 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 324 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 307 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 313 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 334 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 295 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 389 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
PRDM14 1 dataset
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 166 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RAD21 2 datasets
ChIP WA09 GSE105028.RAD21.WA09 185 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 251 bp overlap
REST 2 datasets
ChIP HEK293 ENCFF073DOT 59 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 94 bp overlap
RORB 1 dataset
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 488 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 297 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 421 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 317 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 457 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 374 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 393 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 459 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 424 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 504 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 316 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 461 bp overlap
SMAD3 4 datasets
ChIP BG03 GSE21614.SMAD3.BG03 315 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 274 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 147 bp overlap
ChIP hESC GSE75297.SMAD3.hESC 179 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 290 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 350 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 300 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 316 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 277 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 360 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 234 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 367 bp overlap
SOX2 3 datasets
ChIP hESC GSE69479.SOX2.hESC 255 bp overlap
ChIP hESC GSE18292.SOX2.hESC 226 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 358 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 325 bp overlap
ChIP WTC11 ENCFF688PEU 439 bp overlap
SP3 1 dataset
ChIP HEK293 ENCSR141PZA.SP3.HEK293 86 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 149 bp overlap
ChIP hESC GSE122298.TBP.hESC 196 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 146 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 216 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 152 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 272 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 431 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 397 bp overlap
TEF 1 dataset
Motif DE_12h DE_12h-TEF_MA0843.2 10 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 321 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 362 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 272 bp overlap
TRPS1 1 dataset
Motif DE_12h DE_12h-TRPS1_MA1970.2 8 bp overlap
TSHZ1 1 dataset
ChIP HEK293 ENCFF893BGV 76 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 104 bp overlap
ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 151 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 116 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 135 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ChIP HEK293 ENCFF007TAP 64 bp overlap
ZFP3 2 datasets
ChIP HEK293 ENCFF345CRU 81 bp overlap
ChIP HEK293 ENCSR134QIE.ZFP3.HEK293 93 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 135 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF121 2 datasets
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 66 bp overlap
ChIP WTC11 ENCFF291API 194 bp overlap
ZNF138 1 dataset
ChIP HEK293 ENCFF585PTQ 81 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 216 bp overlap
ZNF19 1 dataset
ChIP HEK293 ENCFF811PGJ 66 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 283 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 117 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 156 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 186 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 77 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 209 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 173 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 161 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF426 2 datasets
ChIP HEK293 ENCFF957XYN 165 bp overlap
ChIP HEK293 ENCSR224NFP.ZNF426.HEK293 186 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 382 bp overlap
ZNF518A 3 datasets
ChIP HEK293 ENCFF892ULS 157 bp overlap
ChIP HEK293 ENCFF892ULS 157 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 176 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF555 2 datasets
ChIP HEK293 ENCFF406QFI 84 bp overlap
ChIP HEK293 ENCSR767XSF.ZNF555.HEK293 125 bp overlap
ZNF560 1 dataset
ChIP HEK293 ENCFF901CEW 54 bp overlap
ZNF610 1 dataset
ChIP HEK293 ENCFF778UKJ 99 bp overlap
ZNF623 2 datasets
ChIP HEK293 ENCFF505YHP 79 bp overlap
ChIP HEK293 ENCSR022IZK.ZNF623.HEK293 134 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 79 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 98 bp overlap
ZNF654 2 datasets
ChIP HEK293 ENCFF636WIC 51 bp overlap
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 74 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF791 2 datasets
ChIP HEK293 ENCFF232OEV 87 bp overlap
ChIP HEK293 ENCSR775HFF.ZNF791.HEK293 88 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 115 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 127 bp overlap