chr8 : 37,890,357 37,890,712
355 bp 120 TFs 1 linked gene
This 355 bp open chromatin element is linked to RAB11FIP1 and is bound by 120 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RAB11FIP1 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:37,885,357 – 37,895,712
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
120 transcription factors
Source
Cell type
ASH2L 3 datasets
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 316 bp overlap
ChIP H1 ENCFF399KAM 355 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 355 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 355 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 275 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 355 bp overlap
BCL11A 6 datasets
ChIP GM12878 ENCFF717YPR 241 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 187 bp overlap
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 201 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 170 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 209 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 340 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 291 bp overlap
BRD4 6 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 307 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 87 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 76 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 151 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 205 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 207 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCFF056JUS 64 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 120 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 109 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 311 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 112 bp overlap
CTNNB1 1 dataset
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 351 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 141 bp overlap
DPF2 3 datasets
ChIP GM12878 ENCFF681AJV 63 bp overlap
ChIP GM12878 ENCFF681AJV 274 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 238 bp overlap
DPRX 1 dataset
Motif DE_12h DE_12h-DPRX_MA1480.2 9 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 133 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 68 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 163 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 265 bp overlap
ESR1 2 datasets
ChIP breast_tumor_Female_1 GSE104399.ESR1.breast_tumor_Female_1 209 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 215 bp overlap
ETV6 2 datasets
ChIP GM12878 ENCFF105ZMI 53 bp overlap
ChIP WTC11 ENCFF812SCD 355 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 355 bp overlap
FLI1 5 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 301 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 305 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 266 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 280 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 271 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 224 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 216 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 189 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 266 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 355 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 349 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 339 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 345 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 332 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 325 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 291 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 355 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 131 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 158 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 303 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 355 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 339 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 261 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF616FJX 110 bp overlap
ChIP GM12878 ENCFF753XDO 345 bp overlap
ChIP GM12878 ENCFF824TGK 276 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 355 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 355 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 175 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 355 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 337 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 355 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 69 bp overlap
JUND 2 datasets
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 177 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 293 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 158 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 318 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 116 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCFF995GXC 131 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 289 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 310 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 355 bp overlap
MTA3 2 datasets
ChIP GM12878 ENCFF681QPL 355 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 239 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 285 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 228 bp overlap
ChIP H1 ENCFF747ZPQ 101 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 355 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 355 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 281 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 355 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 355 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 355 bp overlap
ChIP hESC GSE18292.NANOG.hESC 241 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 235 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 105 bp overlap
NIPBL 5 datasets
ChIP GM12878 GSE93080.NIPBL.GM12878 121 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 189 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 262 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 264 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 211 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POLR2A 3 datasets
ChIP GM12891 ENCFF012SUT 235 bp overlap
ChIP SK-N-MC ENCFF088IVG 355 bp overlap
ChIP neural cell ENCFF604SPB 321 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 345 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 292 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 169 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 217 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 313 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 195 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 164 bp overlap
RARA 4 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 229 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 355 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 355 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 254 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 355 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 309 bp overlap
ChIP neural cell ENCFF882LXX 355 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000BIS.SIN3A.WA01 120 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 279 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 252 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 329 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 344 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 355 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 355 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 317 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 350 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 325 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 344 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 263 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 185 bp overlap
SMARCA2 6 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 319 bp overlap
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 244 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 269 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 227 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 355 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 355 bp overlap
SMARCA4 11 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 201 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 286 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 281 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 173 bp overlap
ChIP G-401_Dox GSE71504.SMARCA4.G-401_Dox 274 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 316 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 306 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 355 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 355 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 268 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 340 bp overlap
SMARCC1 8 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 208 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 298 bp overlap
ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 264 bp overlap
ChIP G-401_NoDox GSE71504.SMARCC1.G-401_NoDox 182 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 324 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 298 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 330 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 293 bp overlap
SOX2 6 datasets
ChIP HNSC GSE69479.SOX2.HNSC 323 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 208 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 121 bp overlap
ChIP hESC GSE18292.SOX2.hESC 189 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 288 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 223 bp overlap
SOX9 1 dataset
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 290 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 291 bp overlap
ChIP WTC11 ENCFF688PEU 355 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 166 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 355 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 305 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 152 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 312 bp overlap
STAT5A 1 dataset
ChIP GM12878 ENCFF267JUM 179 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 240 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 171 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 228 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 319 bp overlap
TBP 3 datasets
ChIP H1 ENCFF859IIO 308 bp overlap
ChIP hESC GSE122298.TBP.hESC 253 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 128 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 322 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 264 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 307 bp overlap
TEAD1 2 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
ChIP WTC11 ENCFF502QUV 346 bp overlap
TEAD2 1 dataset
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 4 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 335 bp overlap
ChIP H1 ENCFF778PAX 82 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 308 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 237 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 322 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 347 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 139 bp overlap
TRIM22 3 datasets
ChIP GM12878 ENCFF919OMX 212 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 355 bp overlap
ChIP GM12878 ENCSR637QAM.TRIM22.GM12878 260 bp overlap
YAP1 1 dataset
ChIP WA01 GSE99202.YAP1.WA01 326 bp overlap
YBX1 1 dataset
ChIP GM12878 ENCFF641EEK 71 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 237 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCFF007OSW 71 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 355 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 260 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 195 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap