chr19 : 29,525,368 29,525,779
411 bp 133 TFs 3 linked genes
This 411 bp open chromatin element is linked to VSTM2B-DT, VSTM2B, and ENSG00000266248 and is bound by 133 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
VSTM2B-DT at TSS At TSS Proximity
VSTM2B 213 bp At TSS Proximity
ENSG00000266248 1.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:29,520,368 – 29,530,779
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
133 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 168 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 324 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 210 bp overlap
BRD4 7 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 224 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 231 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 364 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 65 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 301 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 309 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 260 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 277 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 269 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 313 bp overlap
CTCF 12 datasets
ChIP HEK293 ENCFF821TIC 411 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 312 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 195 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 237 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 246 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 93 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 368 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF595WAL 145 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 317 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 275 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 246 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 255 bp overlap
CTCFL 2 datasets
ChIP FT282 GSE131931.CTCFL.FT282 173 bp overlap
ChIP K-562 GSE70764.CTCFL.K-562 196 bp overlap
E2F6 2 datasets
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 144 bp overlap
EHMT2 1 dataset
ChIP Rh41 GSE118666.EHMT2.Rh41 167 bp overlap
ESR1 1 dataset
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 231 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 411 bp overlap
EZH2 24 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 170 bp overlap
ChIP A673 ENCFF790MVL 224 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 318 bp overlap
ChIP GM23338 ENCFF613YON 167 bp overlap
ChIP H1 ENCFF232NZA 411 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 340 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 298 bp overlap
ChIP T-REx-293_K27WT GSE118954.EZH2.T-REx-293_K27WT 243 bp overlap
ChIP T-REx-293_K27WT_24h GSE118954.EZH2.T-REx-293_K27WT_24h 288 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 314 bp overlap
ChIP T-REx-293_K27WT_72h GSE118954.EZH2.T-REx-293_K27WT_72h 250 bp overlap
ChIP T98G GSE112240.EZH2.T98G 292 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 367 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 121 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 369 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 247 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 295 bp overlap
ChIP hepatocyte ENCFF552DZB 392 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 335 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 411 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 334 bp overlap
ChIP neural progenitor cell ENCFF018MKA 411 bp overlap
ChIP neural progenitor cell ENCFF472NFV 106 bp overlap
ChIP neural progenitor cell ENCFF472NFV 411 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 411 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCFF446EIF 74 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 266 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 411 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 407 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 280 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 315 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 214 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 214 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 192 bp overlap
INO80 1 dataset
ChIP Hep-G2 GSE97411.INO80.Hep-G2 188 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 240 bp overlap
JARID2 3 datasets
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 289 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 342 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 272 bp overlap
KAT7 2 datasets
ChIP WTC11 ENCFF581TPB 83 bp overlap
ChIP WTC11 ENCFF581TPB 293 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 68 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 210 bp overlap
KLF1 3 datasets
ChIP HEK293 ENCFF159QSW 187 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 411 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 142 bp overlap
KLF14 1 dataset
ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 255 bp overlap
KLF16 1 dataset
ChIP HEK293 ENCSR397DQC.KLF16.HEK293 280 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 387 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 411 bp overlap
KLF7 2 datasets
ChIP HEK293 ENCFF599UKL 371 bp overlap
ChIP HEK293 ENCSR604VWJ.KLF7.HEK293 232 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 348 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 285 bp overlap
KLF9 1 dataset
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 288 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 331 bp overlap
ChIP WTC11 ENCFF223QFY 411 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 410 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 147 bp overlap
MXI1 2 datasets
ChIP neural ENCSR934NHU.MXI1.neural 390 bp overlap
ChIP neural cell ENCFF623HQN 222 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 281 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 297 bp overlap
MYC-DAXX 1 dataset
ChIP HEK293_GAL4-DBD GSE107348.MYC-DAXX.HEK293_GAL4-DBD 295 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 114 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 249 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 146 bp overlap
MYNN 1 dataset
ChIP HEK293 ENCSR707BNG.MYNN.HEK293 220 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 283 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 264 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 199 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 68 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 311 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 217 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 266 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 323 bp overlap
PBX3 1 dataset
ChIP HEK293 ENCFF177BTM 411 bp overlap
PHF8 2 datasets
ChIP H1 ENCFF427UFV 411 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 90 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF384GAB 86 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 411 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 240 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 312 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 243 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 54 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 258 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 297 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 159 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 386 bp overlap
RBPJ 1 dataset
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 325 bp overlap
REST 2 datasets
ChIP HEK293 ENCSR896UBV.REST.HEK293 241 bp overlap
ChIP neural ENCSR000BTV.REST.neural 184 bp overlap
RNF2 5 datasets
ChIP H1 ENCFF239FFS 411 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 360 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 330 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 345 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 346 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 220 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 287 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 411 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 370 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 128 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 165 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 265 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 409 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 123 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 411 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 276 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 384 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 249 bp overlap
SP2 4 datasets
ChIP HEK293 ENCFF181QXT 72 bp overlap
ChIP HEK293 ENCFF181QXT 398 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 411 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 268 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 327 bp overlap
SS18 4 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 109 bp overlap
ChIP Aska-SS GSE108025.SS18.Aska-SS 73 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 268 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 155 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 254 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 192 bp overlap
SUZ12 5 datasets
ChIP H1 ENCFF881NFR 411 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 411 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 235 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 120 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 327 bp overlap
TAF1 1 dataset
ChIP neural ENCSR000BTX.TAF1.neural 172 bp overlap
TP53 1 dataset
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 285 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 159 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 388 bp overlap
TSHZ1 1 dataset
ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 242 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 307 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 247 bp overlap
YY1 3 datasets
ChIP HEK293 ENCFF734SBY 371 bp overlap
ChIP HEK293 ENCSR859RAO.YY1.HEK293 238 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 97 bp overlap
ZBTB10 2 datasets
ChIP HEK293 ENCFF679BCK 353 bp overlap
ChIP HEK293 ENCSR004PLU.ZBTB10.HEK293 296 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 137 bp overlap
ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 268 bp overlap
ZBTB14 1 dataset
ChIP HEK293 GSE76494.ZBTB14.HEK293 225 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 395 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 411 bp overlap
ZBTB26 3 datasets
ChIP HEK293 ENCFF752POA 411 bp overlap
ChIP HEK293 ENCFF752TCU 411 bp overlap
ChIP HEK293 GSE76494.ZBTB26.HEK293 243 bp overlap
ZBTB33 1 dataset
ChIP WTC11 ENCFF048CFR 97 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 411 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 411 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 246 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 411 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 316 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 298 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 411 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 376 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 299 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 273 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 279 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 394 bp overlap
ChIP HEK293T GSE78099.ZNF263.HEK293T 150 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 411 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 209 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 207 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 339 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCFF184XEW 58 bp overlap
ZNF423 2 datasets
ChIP HEK293 ENCFF937QHI 357 bp overlap
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 250 bp overlap
ZNF449 3 datasets
ChIP HEK293 ENCFF764ZIC 397 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 393 bp overlap
ChIP HEK293 GSE76494.ZNF449.HEK293 208 bp overlap
ZNF501 2 datasets
ChIP HEK293 ENCFF066RAQ 389 bp overlap
ChIP HEK293 ENCSR461ZJT.ZNF501.HEK293 284 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 243 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 377 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 305 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 104 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 194 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 110 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 304 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 288 bp overlap
ZNF777 2 datasets
ChIP HEK293 ENCFF569SYP 326 bp overlap
ChIP HEK293 ENCSR295BIP.ZNF777.HEK293 316 bp overlap
ZNF837 2 datasets
ChIP HEK293 ENCFF961YOZ 273 bp overlap
ChIP HEK293 ENCSR711UOA.ZNF837.HEK293 241 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 94 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 293 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 307 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 254 bp overlap