chr17 : 27,576,477 27,576,663
186 bp 110 TFs 1 linked gene
This 186 bp open chromatin element is linked to KSR1 and is bound by 110 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KSR1 791 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:27,571,477 – 27,581,663
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
110 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 186 bp overlap
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 186 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 152 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 84 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 186 bp overlap
ChIP K562 ENCFF938UXQ 186 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 185 bp overlap
ATF3 3 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 186 bp overlap
ChIP K562 ENCFF604FPV 136 bp overlap
ChIP K562 ENCFF921JQW 186 bp overlap
ATF4 10 datasets
ChIP HUDEP-2 GSE143961.ATF4.HUDEP-2 122 bp overlap
ChIP HUDEP-2_ATF4-DN-diff GSE153767.ATF4.HUDEP-2_ATF4-DN-diff 103 bp overlap
ChIP HUDEP-2_KO GSE143961.ATF4.HUDEP-2_KO 138 bp overlap
ChIP HepG2 ENCFF819ULE 177 bp overlap
ChIP HepG2 ENCFF903ADR 98 bp overlap
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 123 bp overlap
ChIP K-562 ENCSR145TSJ.ATF4.K-562 186 bp overlap
ChIP K562 ENCFF030XBX 106 bp overlap
ChIP K562 ENCFF674KTF 158 bp overlap
ChIP K562 ENCFF674KTF 158 bp overlap
ATF7 2 datasets
ChIP K-562 ENCSR972ZBV.ATF7.K-562 186 bp overlap
ChIP K562 ENCFF308SKS 186 bp overlap
BACH1 1 dataset
ChIP K-562 ENCSR740NPG.BACH1.K-562 155 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 186 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 186 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 186 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 185 bp overlap
BRD4 7 datasets
ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 63 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 186 bp overlap
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 186 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 175 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 186 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 186 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 185 bp overlap
BRD9 1 dataset
ChIP K-562 ENCSR177XCS.BRD9.K-562 186 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 186 bp overlap
CEBPA 2 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 86 bp overlap
ChIP HepG2 ENCFF175DFS 114 bp overlap
CEBPB 13 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 76 bp overlap
ChIP A549 ENCFF235AIY 130 bp overlap
ChIP A549 ENCFF797MXZ 53 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 152 bp overlap
ChIP HeLa-S3 ENCFF722WEG 77 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 83 bp overlap
ChIP HepG2 ENCFF536NTI 86 bp overlap
ChIP IMR-90 ENCFF468UGY 103 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 109 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 66 bp overlap
ChIP K562 ENCFF189VBN 119 bp overlap
ChIP K562 ENCFF194QGF 142 bp overlap
ChIP K562 ENCFF584CTB 186 bp overlap
CEBPD 3 datasets
ChIP HAEC_IL1b_4h GSE89970.CEBPD.HAEC_IL1b_4h 143 bp overlap
ChIP HepG2 ENCFF345JDB 132 bp overlap
ChIP K-562 ENCSR000BVY.CEBPD.K-562 143 bp overlap
CEBPG 7 datasets
ChIP HepG2 ENCFF503XBC 70 bp overlap
ChIP K-562 ENCSR490LWA.CEBPG.K-562 186 bp overlap
ChIP K-562 ENCSR620VIC.CEBPG.K-562 175 bp overlap
ChIP K562 ENCFF651CMK 186 bp overlap
ChIP K562 ENCFF783ADE 74 bp overlap
ChIP K562 ENCFF783ADE 55 bp overlap
ChIP K562 ENCFF956TPS 141 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 186 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 95 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 167 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 146 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 186 bp overlap
ChIP K562 ENCFF403WPG 186 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 186 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 162 bp overlap
ChIP BLaER1 ENCFF364PUR 186 bp overlap
DDX20 1 dataset
ChIP K562 ENCFF373BEC 94 bp overlap
DEK 1 dataset
ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 114 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 179 bp overlap
ChIP K562 ENCFF775HUO 186 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 147 bp overlap
EP300 5 datasets
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 138 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 53 bp overlap
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 111 bp overlap
ChIP K-562 ENCSR000EGE.EP300.K-562 186 bp overlap
ChIP K562 ENCFF226VMS 186 bp overlap
EP400 2 datasets
ChIP K-562 ENCSR817QKV.EP400.K-562 186 bp overlap
ChIP K562 ENCFF850OZQ 186 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 186 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 176 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 117 bp overlap
GABPB1 1 dataset
ChIP WTC11 ENCFF166QKI 69 bp overlap
GATA1 6 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 56 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 186 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 169 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 149 bp overlap
ChIP K562 ENCFF094CMK 186 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 130 bp overlap
GATA2 13 datasets
ChIP ESF GSE108408.GATA2.ESF 186 bp overlap
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 186 bp overlap
ChIP HepG2 ENCFF905PYM 186 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 186 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 179 bp overlap
ChIP K562 ENCFF513FTZ 186 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 186 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 171 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 186 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 173 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 186 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 186 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 139 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 107 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 186 bp overlap
ChIP DE DE-GATA4-2 186 bp overlap
ChIP foregut GSE117136.GATA4.foregut 186 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 186 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 186 bp overlap
GATA6 13 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 157 bp overlap
ChIP DE DE-GATA6-1 186 bp overlap
ChIP DE DE-GATA6-2 186 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 186 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 186 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 186 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 186 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 186 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 145 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 186 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 186 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 79 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF705LHX 186 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 186 bp overlap
ChIP K562 ENCFF968WBH 186 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 186 bp overlap
HDAC8 1 dataset
ChIP K562 ENCFF784HCJ 50 bp overlap
HES1 1 dataset
ChIP K562 ENCFF919JVU 165 bp overlap
HMGXB4 2 datasets
ChIP K562 ENCFF620JLK 186 bp overlap
ChIP K562 ENCFF620JLK 126 bp overlap
HNF4A 1 dataset
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 125 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 186 bp overlap
ChIP K562 ENCFF348IBL 186 bp overlap
ChIP K562 ENCFF348IBL 74 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 186 bp overlap
JUND 2 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 165 bp overlap
ChIP K562 ENCFF336RCR 186 bp overlap
KDM1A 2 datasets
ChIP HepG2 ENCFF240UWG 124 bp overlap
ChIP K562 ENCFF128TYE 54 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 82 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 132 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 186 bp overlap
ChIP K562 ENCFF320GSD 186 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 186 bp overlap
MYB 2 datasets
ChIP DU528 GSE94000.MYB.DU528 186 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 186 bp overlap
MYC 3 datasets
ChIP K-562 ENCSR000EGJ.MYC.K-562 156 bp overlap
ChIP K562 ENCFF988ZRU 186 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 126 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 186 bp overlap
NCOA1 1 dataset
ChIP K562 ENCFF962VHQ 186 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF788MPU 186 bp overlap
NR2C1 1 dataset
ChIP K-562 ENCSR178DEG.NR2C1.K-562 186 bp overlap
NR2C2 2 datasets
ChIP K-562 ENCSR750LYM.NR2C2.K-562 107 bp overlap
ChIP K562 ENCFF750AXF 186 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 186 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 186 bp overlap
NR3C1 2 datasets
ChIP IMR-90 ERP007093.NR3C1.IMR-90 97 bp overlap
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 121 bp overlap
NR4A1 1 dataset
ChIP K-562 ENCSR130PDE.NR4A1.K-562 152 bp overlap
PBX3 2 datasets
ChIP SK-N-SH ENCFF876BMC 186 bp overlap
ChIP SK-N-SH ENCFF876BMC 82 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 184 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 186 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 186 bp overlap
ChIP K562 ENCFF236IUS 186 bp overlap
PTTG1 1 dataset
ChIP K-562 ENCSR314BBS.PTTG1.K-562 139 bp overlap
RBFOX2 2 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 126 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 67 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 141 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 161 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 186 bp overlap
RELA 1 dataset
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 123 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR076YPO.RNF2.K-562 168 bp overlap
ChIP K562 ENCFF061ATI 186 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 140 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 88 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 185 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 186 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 186 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 134 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 100 bp overlap
SMAD4 2 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 161 bp overlap
ChIP K562 ENCFF628RBP 186 bp overlap
SMARCA4 8 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 186 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 186 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 186 bp overlap
ChIP K562 ENCFF506JCB 184 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 186 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 186 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 186 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 112 bp overlap
SMARCB1 1 dataset
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCB1.TTC-1240_SMARCB1-FL 127 bp overlap
SMARCC1 6 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 186 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 52 bp overlap
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 109 bp overlap
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 186 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 186 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 133 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 186 bp overlap
ChIP K562 ENCFF690CFF 186 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 97 bp overlap
SOX6 4 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 123 bp overlap
ChIP HepG2 ENCFF767OCK 65 bp overlap
ChIP K-562 ENCSR788RSW.SOX6.K-562 186 bp overlap
ChIP K562 ENCFF059YCJ 133 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 186 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 186 bp overlap
TBL1XR1 1 dataset
ChIP K562 ENCFF899VEC 186 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 141 bp overlap
TEAD1 1 dataset
ChIP K-562 ENCSR591ASD.TEAD1.K-562 164 bp overlap
TEAD4 4 datasets
ChIP K562 ENCFF673NIK 186 bp overlap
ChIP K562 ENCFF673NIK 88 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 173 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 107 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 77 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 160 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 50 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 186 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 186 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 186 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 186 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 88 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 77 bp overlap
ZNF589 1 dataset
ChIP K562 ENCFF770FHN 82 bp overlap