chr17:7,207,943–7,208,476

chr17 : 7,207,943 – 7,208,476

533 bp 91 TFs 22 linked genes

This 533 bp open chromatin element is linked to 22 target genes and is bound by 91 transcription factors.

Linked Genes

22 genes

Gene	Expression	Dist. to TSS	Distance	Link type
DLG4		3.0 kb	Proximal	Proximity
ACADVL		11.7 kb	Distal	Multiome
DVL2		26.3 kb	Distal	Multiome
PHF23		29.6 kb	Distal	Multiome
GABARAP		34.2 kb	Distal	Multiome
CTDNEP1		43.7 kb	Distal	Multiome
ELP5		44.3 kb	Distal	Multiome
CLDN7		55.0 kb	Distal	Multiome
YBX2		86.4 kb	Distal	Multiome
EIF5A		99.4 kb	Distal	Multiome
GPS2		107.1 kb	Distal	Multiome
NEURL4		121.2 kb	Distal	Multiome
ACAP1		128.3 kb	Distal	Multiome
SLC16A13		172.2 kb	Distal	Multiome
PLSCR3		186.3 kb	Distal	Multiome
C17orf49		193.5 kb	Distal	Multiome
RNASEK		195.6 kb	Distal	Multiome
TMEM256		195.9 kb	Distal	Multiome
NLGN2		196.6 kb	Distal	Multiome
TMEM102		227.2 kb	Distal	Multiome
ZBTB4		276.0 kb	Distal	Multiome
POLR2A		276.1 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

91 transcription factors

ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 328 bp overlap

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 533 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 514 bp overlap

ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 58 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 460 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 533 bp overlap

BRD4 12 datasets

ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 225 bp overlap

ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 213 bp overlap

ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 217 bp overlap

ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 228 bp overlap

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 481 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 508 bp overlap

ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 338 bp overlap

ChIP hESC GSE33281.BRD4.hESC 165 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 533 bp overlap

ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 366 bp overlap

ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 411 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 533 bp overlap

CBFA2T2 1 dataset

ChIP NCCIT GSE71675.CBFA2T2.NCCIT 225 bp overlap

ChIP ME-1 GSE46044.CBFB.ME-1 355 bp overlap

ChIP KB GSE52469.CDK6.KB 173 bp overlap

ChIP WA01 ENCSR000EBT.CHD2.WA01 313 bp overlap

ChIP T-47D_ETOH_5 GSE62428.CHD8.T-47D_ETOH_5 185 bp overlap

CIITA 1 dataset

ChIP Raji_AB1 GSE52941.CIITA.Raji_AB1 55 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 389 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 315 bp overlap

CTCF 4 datasets

ChIP GM23338 ENCFF772DML 163 bp overlap

ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 60 bp overlap

ChIP neural progenitor cell ENCFF581WPG 248 bp overlap

ChIP neural progenitor cell ENCFF581WPG 449 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 251 bp overlap

E2F6 3 datasets

ChIP H1 ENCFF785DWK 194 bp overlap

ChIP H1 ENCFF785DWK 364 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 479 bp overlap

EGR1 3 datasets

ChIP A-375 GSE116190.EGR1.A-375 354 bp overlap

ChIP K-562 ENCSR000BNE.EGR1.K-562 111 bp overlap

ChIP WA01 ENCSR000BJA.EGR1.WA01 220 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 182 bp overlap

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 402 bp overlap

ChIP MCF-7 GSE23730.ERG.MCF-7 254 bp overlap

ChIP WTC11 ENCFF011YUL 104 bp overlap

ESR1 2 datasets

ChIP Ishikawa GSE99905.ESR1.Ishikawa 255 bp overlap

ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 359 bp overlap

ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 300 bp overlap

ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 202 bp overlap

FOXA2 1 dataset

ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 262 bp overlap

FOXK1 1 dataset

ChIP WTC11 ENCFF875IGU 391 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 188 bp overlap

HAND2 1 dataset

ChIP Kelly GSE94822.HAND2.Kelly 155 bp overlap

HCFC1R1 1 dataset

ChIP cartilage GSE100311.HCFC1R1.cartilage 79 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 324 bp overlap

HEXIM1 1 dataset

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 429 bp overlap

HIVEP1 1 dataset

ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 317 bp overlap

HNRNPK 4 datasets

ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 271 bp overlap

ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 266 bp overlap

ChIP HepG2 ENCFF493GNS 464 bp overlap

ChIP HepG2 ENCFF826MXP 475 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 188 bp overlap

ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 210 bp overlap

ChIP WA01 ENCSR000BKP.JUND.WA01 123 bp overlap

KDM1A 1 dataset

ChIP H1 ENCFF696SGD 89 bp overlap

KDM4A 2 datasets

ChIP H1 ENCFF078LED 198 bp overlap

ChIP WA01 ENCSR000AVC.KDM4A.WA01 462 bp overlap

KDM6B 1 dataset

ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 192 bp overlap

KLF4 2 datasets

ChIP WIBR3 GSE130417.KLF4.WIBR3 127 bp overlap

ChIP hiPSC GSE56567.KLF4.hiPSC 147 bp overlap

KLF9 3 datasets

ChIP GBM1A GSE62211.KLF9.GBM1A 266 bp overlap

ChIP HEK293 ENCFF588INF 117 bp overlap

ChIP HEK293 ENCSR076EZB.KLF9.HEK293 334 bp overlap

ChIP H1 ENCFF914VQY 265 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 192 bp overlap

ChIP WTC11 ENCFF223QFY 494 bp overlap

ChIP WTC11 ENCFF223QFY 423 bp overlap

MECOM 1 dataset

ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 156 bp overlap

MED1 3 datasets

ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 226 bp overlap

ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 56 bp overlap

ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 285 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 264 bp overlap

MXI1 2 datasets

ChIP H1 ENCFF963FZS 337 bp overlap

ChIP WA01 ENCSR000EBR.MXI1.WA01 284 bp overlap

ChIP H1 ENCFF794ZJT 265 bp overlap

ChIP Kelly GSE138295.MYC.Kelly 376 bp overlap

ChIP WA01 ENCSR000EBY.MYC.WA01 225 bp overlap

MYCN 5 datasets

ChIP BE2C GSE72640.MYCN.BE2C 235 bp overlap

ChIP Kelly GSE94782.MYCN.Kelly 285 bp overlap

ChIP Kelly GSE94822.MYCN.Kelly 403 bp overlap

ChIP Kelly GSE80151.MYCN.Kelly 222 bp overlap

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 473 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 249 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 203 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 410 bp overlap

NCAPH2 1 dataset

ChIP HEK293 GSE97540.NCAPH2.HEK293 315 bp overlap

NFKB1 2 datasets

ChIP HEK293T GSE129618.NFKB1.HEK293T 226 bp overlap

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 429 bp overlap

OGG1 4 datasets

ChIP HEK293 GSE89017.OGG1.HEK293 473 bp overlap

ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 421 bp overlap

ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 320 bp overlap

ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 467 bp overlap

PCBP1 4 datasets

ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 369 bp overlap

ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 240 bp overlap

ChIP K-562 ENCSR052PTN.PCBP1.K-562 370 bp overlap

ChIP K-562 GSE120104.PCBP1.K-562 370 bp overlap

PCBP2 2 datasets

ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 209 bp overlap

ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 209 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 495 bp overlap

ChIP WA01 ENCSR000ATK.PHF8.WA01 148 bp overlap

ChIP fibroblast GSE137084.PML.fibroblast 219 bp overlap

POLR2A 1 dataset

ChIP H1 ENCFF566JSR 533 bp overlap

POU5F1 4 datasets

ChIP BG03 GSE21614.POU5F1.BG03 417 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 533 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 404 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 388 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 533 bp overlap

PRDM14 2 datasets

ChIP NCCIT GSE71675.PRDM14.NCCIT 261 bp overlap

ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 186 bp overlap

RBBP5 4 datasets

ChIP H1 ENCFF905HFL 167 bp overlap

ChIP H1 ENCFF905HFL 533 bp overlap

ChIP H1 ENCFF905HFL 292 bp overlap

ChIP WA01 ENCSR000AQC.RBBP5.WA01 507 bp overlap

RBFOX2 2 datasets

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 354 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 305 bp overlap

ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 298 bp overlap

RNF2 2 datasets

ChIP HEK293T_PCGF135fl GSE119618.RNF2.HEK293T_PCGF135fl 345 bp overlap

ChIP WA09 GSE105028.RNF2.WA09 533 bp overlap

RORC 2 datasets

ChIP HCC70 GSE126380.RORC.HCC70 218 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 317 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 198 bp overlap

ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 414 bp overlap

ChIP WA01 GSE104690.RYBP.WA01 533 bp overlap

SIN3A 4 datasets

ChIP H1 ENCFF042ZSL 474 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 490 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 280 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 184 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 153 bp overlap

ChIP H1 ENCFF263FUH 197 bp overlap

ChIP HEK293 GSE76494.SP1.HEK293 249 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 459 bp overlap

ChIP WTC11 ENCFF688PEU 484 bp overlap

ChIP HEK293 ENCSR807LQP.SP2.HEK293 307 bp overlap

ChIP HEK293 GSE76494.SP4.HEK293 288 bp overlap

ChIP WA01 ENCSR000BQV.SP4.WA01 141 bp overlap

SREBP2 1 dataset

ChIP HCC70 GSE126380.SREBP2.HCC70 533 bp overlap

STAT3 1 dataset

ChIP WA01 ERP004237.STAT3.WA01 417 bp overlap

SUZ12 4 datasets

ChIP H1 ENCFF881NFR 476 bp overlap

ChIP H1 ENCFF881NFR 277 bp overlap

ChIP MCF-7 ENCSR757EMK.SUZ12.MCF-7 57 bp overlap

ChIP WA01 ENCSR000ATS.SUZ12.WA01 241 bp overlap

ChIP H1 ENCFF859IIO 377 bp overlap

ChIP hESC GSE122298.TBP.hESC 205 bp overlap

ChIP Kelly GSE94822.TBX2.Kelly 188 bp overlap

ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 412 bp overlap

TEAD1 1 dataset

ChIP H69 GSE62274.TEAD1.H69 182 bp overlap

TFAP2A 1 dataset

ChIP WA09 GSE105081.TFAP2A.WA09 167 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 533 bp overlap

TFIIIC 1 dataset

ChIP HEK293 GSE119418.TFIIIC.HEK293 417 bp overlap

THAP1 1 dataset

ChIP K-562 ENCSR000BNN.THAP1.K-562 128 bp overlap

TRIM25 1 dataset

ChIP BT-549 GSE79588.TRIM25.BT-549 245 bp overlap

TRIM28 1 dataset

ChIP hESC GSE115387.TRIM28.hESC 324 bp overlap

USF1 3 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 280 bp overlap

ChIP WTC11 ENCFF699QGS 425 bp overlap

USF2 3 datasets

ChIP H1 ENCFF434EDF 277 bp overlap

ChIP WA01 ENCSR000ECD.USF2.WA01 155 bp overlap

ChIP WTC11 ENCFF139JAW 401 bp overlap

ChIP Huh-7 GSE97411.YY1.Huh-7 112 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 134 bp overlap

ZBTB33 2 datasets

ChIP K-562 ENCSR876GXA.ZBTB33.K-562 460 bp overlap

ChIP MCF-7 ENCSR231YFE.ZBTB33.MCF-7 231 bp overlap

ZBTB7A 6 datasets

ChIP HEK293 ENCFF420MRZ 199 bp overlap

ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 125 bp overlap

ChIP K-562 ENCSR000BME.ZBTB7A.K-562 237 bp overlap

ChIP K-562 GSE103445.ZBTB7A.K-562 160 bp overlap

ChIP K562 ENCFF579ZGM 401 bp overlap

ChIP K562 ENCFF579ZGM 326 bp overlap

ZNF143 2 datasets

ChIP WA01 ENCSR000EBW.ZNF143.WA01 145 bp overlap

ChIP WA01 ENCSR000EBW.ZNF143.WA01 275 bp overlap

ZNF865 1 dataset

ChIP HepG2 ENCFF472KAQ 58 bp overlap