chr16 : 50,539,882 50,540,391
509 bp 134 TFs 4 linked genes
This 509 bp open chromatin element is linked to 4 target genes and is bound by 134 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
NKD1 8.0 kb Proximal Proximity
BRD7 171.2 kb Distal Multiome+HiCAR
CYLD 202.0 kb Distal Multiome
ADCY7 294.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:50,534,882 – 50,545,391
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
134 transcription factors
Source
Cell type
AGO1 5 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 119 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 98 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 195 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 194 bp overlap
ChIP HepG2 ENCFF358CXO 171 bp overlap
AGO2 3 datasets
ChIP HepG2 ENCFF252VFI 182 bp overlap
ChIP HepG2 ENCFF252VFI 284 bp overlap
ChIP HepG2 ENCFF773YDL 284 bp overlap
ARID4A 1 dataset
ChIP HepG2 ENCFF142DIE 296 bp overlap
ATF2 1 dataset
ChIP HepG2 ENCFF578ZBI 383 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 161 bp overlap
BORCS8,MEF2B 2 datasets
ChIP HepG2 ENCFF255VGS 408 bp overlap
ChIP HepG2 ENCFF255VGS 209 bp overlap
BRD4 6 datasets
ChIP SW480 GSE110473.BRD4.SW480 415 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 103 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 305 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 147 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 70 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 198 bp overlap
CBFB 1 dataset
ChIP Hep-G2 ENCSR479RZV.CBFB.Hep-G2 157 bp overlap
CBX5 3 datasets
ChIP HepG2 ENCFF251YQZ 289 bp overlap
ChIP HepG2 ENCFF251YQZ 356 bp overlap
ChIP HepG2 ENCFF251YQZ 77 bp overlap
CENPT 1 dataset
ChIP HepG2 ENCFF653WQH 298 bp overlap
CTCF 13 datasets
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 51 bp overlap
ChIP brain ENCFF163BBN 57 bp overlap
ChIP brain ENCFF685VRG 89 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF149PUN 54 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF257LSY 62 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF258PHG 52 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 54 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 56 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF403LNW 73 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 99 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 51 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF974AQC 58 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 99 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 186 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 173 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 151 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 192 bp overlap
ESR1 6 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 91 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 156 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 118 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 115 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 75 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 225 bp overlap
ETV4 1 dataset
ChIP HepG2 ENCFF381AMW 363 bp overlap
FIP1L1 2 datasets
ChIP Hep-G2 GSE120104.FIP1L1.Hep-G2 436 bp overlap
ChIP HepG2 ENCFF844GGM 346 bp overlap
FOSL2 4 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 482 bp overlap
ChIP HepG2 ENCFF548CXY 270 bp overlap
ChIP HepG2 ENCFF548CXY 357 bp overlap
ChIP HepG2 ENCFF796NIA 203 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 296 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 222 bp overlap
FUBP1 1 dataset
ChIP HepG2 ENCFF316FMQ 361 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 331 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 417 bp overlap
ChIP DE DE-GATA6-2 277 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 313 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 342 bp overlap
GMEB1 1 dataset
ChIP HepG2 ENCFF434UDC 209 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF750ZWM 107 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 338 bp overlap
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 335 bp overlap
HNRNPL 1 dataset
ChIP HepG2 ENCFF671UYF 418 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 449 bp overlap
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 258 bp overlap
HOXA3 4 datasets
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 125 bp overlap
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 143 bp overlap
ChIP HepG2 ENCFF374TCI 381 bp overlap
ChIP HepG2 ENCFF374TCI 344 bp overlap
JUND 1 dataset
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 131 bp overlap
KDM2A 2 datasets
ChIP HepG2 ENCFF491GTR 303 bp overlap
ChIP HepG2 ENCFF491GTR 293 bp overlap
KDM5A 1 dataset
ChIP HepG2 ENCFF105YGO 125 bp overlap
KDM5B 1 dataset
ChIP HepG2 ENCFF706LUI 351 bp overlap
KLF10 1 dataset
ChIP Hep-G2 GSE97661.KLF10.Hep-G2 130 bp overlap
KLF13 1 dataset
ChIP HepG2 ENCFF548HIW 348 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 322 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 63 bp overlap
MCRS1 2 datasets
ChIP Hep-G2 GSE107730.MCRS1.Hep-G2 95 bp overlap
ChIP Hep-G2 GSE97411.MCRS1.Hep-G2 95 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 203 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 138 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 162 bp overlap
MYC 1 dataset
ChIP HepG2 ENCFF575FXK 120 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 377 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 363 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 261 bp overlap
NR0B2 1 dataset
ChIP HepG2 ENCFF071MVY 374 bp overlap
NR2F6 3 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 172 bp overlap
ChIP HepG2 ENCFF514UJI 267 bp overlap
ChIP HepG2 ENCFF514UJI 345 bp overlap
OLIG2 5 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 304 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 407 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 509 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 259 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 308 bp overlap
PAF1 1 dataset
ChIP HepG2 ENCFF949UAN 377 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 193 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 250 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 242 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 309 bp overlap
PHF8 2 datasets
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF065NWR 116 bp overlap
POLR2A 3 datasets
ChIP HepG2 ENCFF252NAR 509 bp overlap
ChIP HepG2 ENCFF252NAR 364 bp overlap
ChIP HepG2 ENCFF718XAJ 274 bp overlap
POLR2G 3 datasets
ChIP HepG2 ENCFF241AEG 509 bp overlap
ChIP HepG2 ENCFF241AEG 509 bp overlap
ChIP HepG2 ENCFF508UTS 509 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 307 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 273 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 336 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 304 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 225 bp overlap
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 220 bp overlap
RBFOX2 6 datasets
ChIP HepG2 ENCFF554DMZ 282 bp overlap
ChIP HepG2 ENCFF554DMZ 250 bp overlap
ChIP HepG2 ENCFF554DMZ 51 bp overlap
ChIP HepG2 ENCFF939HTZ 282 bp overlap
ChIP HepG2 ENCFF939HTZ 250 bp overlap
ChIP HepG2 ENCFF939HTZ 51 bp overlap
RBM39 3 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 310 bp overlap
ChIP HepG2 ENCFF084YZE 509 bp overlap
ChIP HepG2 ENCFF801JUH 494 bp overlap
RCOR2 2 datasets
ChIP HepG2 ENCFF310RFX 480 bp overlap
ChIP HepG2 ENCFF310RFX 276 bp overlap
RREB1 1 dataset
ChIP HepG2 ENCFF986CSN 357 bp overlap
RXRA 2 datasets
ChIP HepG2 ENCFF763IEA 218 bp overlap
ChIP HepG2 ENCFF763IEA 391 bp overlap
SFPQ 1 dataset
ChIP Hep-G2 GSE120104.SFPQ.Hep-G2 200 bp overlap
SIN3B 1 dataset
ChIP Hep-G2 ENCSR452YHM.SIN3B.Hep-G2 113 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 406 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 340 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 367 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 139 bp overlap
SNAI1 1 dataset
ChIP HepG2 ENCFF017SIW 96 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 357 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 394 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 509 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 405 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 305 bp overlap
SP4 1 dataset
ChIP HepG2 ENCFF865DSQ 257 bp overlap
SRSF1 3 datasets
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 483 bp overlap
ChIP HepG2 ENCFF509LHO 237 bp overlap
ChIP HepG2 ENCFF509LHO 509 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 509 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 509 bp overlap
SSRP1 2 datasets
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 504 bp overlap
ChIP HepG2 ENCFF540BLL 247 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 119 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 296 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 186 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 195 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 51 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 86 bp overlap
TFDP1 1 dataset
ChIP HepG2 ENCFF717XKC 305 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 453 bp overlap
THAP9 1 dataset
ChIP HepG2 ENCFF687WSR 398 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 347 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 401 bp overlap
U2AF1 3 datasets
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 509 bp overlap
ChIP Hep-G2 ENCSR868JLS.U2AF1.Hep-G2 345 bp overlap
ChIP Hep-G2 ENCSR868JLS.U2AF1.Hep-G2 96 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 93 bp overlap
ZBTB1 1 dataset
ChIP HepG2 ENCFF080BHY 277 bp overlap
ZBTB3 1 dataset
ChIP HepG2 ENCFF224AQL 75 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 337 bp overlap
ZBTB4 1 dataset
ChIP HepG2 ENCFF828GZH 117 bp overlap
ZC3H4 2 datasets
ChIP HepG2 ENCFF603QUY 317 bp overlap
ChIP HepG2 ENCFF603QUY 373 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 288 bp overlap
ZFP90 1 dataset
ChIP HepG2 ENCFF409XXV 359 bp overlap
ZFP91 2 datasets
ChIP HepG2 ENCFF012CME 509 bp overlap
ChIP HepG2 ENCFF012CME 252 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 470 bp overlap
ZHX2 1 dataset
ChIP Hep-G2 ENCSR407BEZ.ZHX2.Hep-G2 114 bp overlap
ZKSCAN1 3 datasets
ChIP Hep-G2 ENCSR157CAU.ZKSCAN1.Hep-G2 336 bp overlap
ChIP HepG2 ENCFF578KDY 169 bp overlap
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 197 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 184 bp overlap
ZNF232 1 dataset
ChIP HepG2 ENCFF905UTT 299 bp overlap
ZNF354B 1 dataset
ChIP HepG2 ENCFF455UYM 206 bp overlap
ZNF407 2 datasets
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 229 bp overlap
ChIP HepG2 ENCFF537FDC 282 bp overlap
ZNF48 3 datasets
ChIP HepG2 ENCFF362CDQ 64 bp overlap
ChIP HepG2 ENCFF362CDQ 233 bp overlap
ChIP HepG2 ENCFF362CDQ 409 bp overlap
ZNF503 1 dataset
ChIP HepG2 ENCFF923HZL 381 bp overlap
ZNF512 1 dataset
ChIP HepG2 ENCFF113IGR 369 bp overlap
ZNF567 1 dataset
ChIP HepG2 ENCFF284TJW 389 bp overlap
ZNF589 1 dataset
ChIP HepG2 ENCFF700GKM 135 bp overlap
ZNF598 2 datasets
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 103 bp overlap
ChIP HepG2 ENCFF356UIO 274 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 509 bp overlap
ZNF697 1 dataset
ChIP HepG2 ENCFF153LJW 351 bp overlap
ZNF768 2 datasets
ChIP HepG2 ENCFF388QCK 146 bp overlap
ChIP HepG2 ENCFF388QCK 126 bp overlap
ZNF786 1 dataset
ChIP HepG2 ENCFF672KVS 306 bp overlap
ZSCAN25 1 dataset
ChIP HepG2 ENCFF265FLD 429 bp overlap