chr6 : 11,258,819 11,259,503
684 bp 138 TFs 0 linked genes
This 684 bp open chromatin element has no linked target genes and is bound by 138 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:11,253,819 – 11,264,503
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
138 transcription factors
Source
Cell type
BATF2 1 dataset
ChIP HepG2 ENCFF442RPJ 551 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 153 bp overlap
BRD4 2 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 64 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 131 bp overlap
CDX2 4 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 62 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 55 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 303 bp overlap
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 79 bp overlap
CEBPB 1 dataset
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 106 bp overlap
CEBPD 1 dataset
Motif DE_36h DE_36h-CEBPD_MA0836.3 8 bp overlap
CTCF 2 datasets
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
ChIP thyroid gland ENCFF204HWS 243 bp overlap
DRAP1 2 datasets
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 280 bp overlap
ChIP HepG2 ENCFF296JHR 72 bp overlap
E2F8 2 datasets
ChIP HepG2 ENCFF117UYU 413 bp overlap
ChIP HepG2 ENCFF117UYU 601 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 401 bp overlap
EP300 1 dataset
ChIP HepG2 ENCFF354ACD 312 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 188 bp overlap
ESR1 4 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 220 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 219 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 281 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 167 bp overlap
ESRRA 1 dataset
ChIP HepG2 ENCFF033DVS 486 bp overlap
FEZF2 1 dataset
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
FIGLA 2 datasets
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 180 bp overlap
ChIP DE DE-FOXA2-1 505 bp overlap
ChIP DE DE-FOXA2-2 561 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 331 bp overlap
FOXD2 1 dataset
Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 176 bp overlap
Foxl2 1 dataset
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 419 bp overlap
ChIP DE DE-GATA4-2 608 bp overlap
ChIP foregut GSE117136.GATA4.foregut 429 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 684 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 323 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 438 bp overlap
ChIP DE DE-GATA6-2 517 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 317 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 322 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 268 bp overlap
ChIP foregut GSE117136.GATA6.foregut 428 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 342 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 321 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 387 bp overlap
GLI4 1 dataset
ChIP HepG2 ENCFF099VAH 212 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF990GUQ 445 bp overlap
HMGXB4 1 dataset
ChIP HepG2 ENCFF179TAD 561 bp overlap
HNF1B 2 datasets
ChIP Hep-G2 ENCSR127XTZ.HNF1B.Hep-G2 204 bp overlap
ChIP HepG2 ENCFF928THX 425 bp overlap
HNF4A 8 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 350 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 88 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 468 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 349 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 211 bp overlap
ChIP HepG2 ENCFF146SSF 361 bp overlap
ChIP HepG2 ENCFF669NAM 261 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 253 bp overlap
HNF4G 4 datasets
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 188 bp overlap
ChIP HepG2 ENCFF150UPI 448 bp overlap
ChIP HepG2 ENCFF150UPI 461 bp overlap
ChIP HepG2 ENCFF323ATZ 291 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 197 bp overlap
HSF1 1 dataset
ChIP HCT-116_KOFBXW7 GSE57398.HSF1.HCT-116_KOFBXW7 217 bp overlap
Irf1 1 dataset
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 181 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 292 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 133 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 201 bp overlap
MAF 1 dataset
Motif DE_48h DE_48h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_48h DE_48h-MAFA_MA1521.2 13 bp overlap
MAFK 1 dataset
Motif DE_48h DE_48h-MAFK_MA0496.4 10 bp overlap
MAX 4 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 244 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF479OHI 485 bp overlap
ChIP HepG2 ENCFF507HCX 532 bp overlap
MEF2A 2 datasets
ChIP GM12878 ENCFF652BHX 109 bp overlap
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 156 bp overlap
MEF2D 1 dataset
ChIP HepG2 ENCFF576WDO 131 bp overlap
MGA 2 datasets
ChIP HepG2 ENCFF057YJE 165 bp overlap
ChIP HepG2 ENCFF057YJE 578 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 82 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 231 bp overlap
MLX 1 dataset
ChIP Hep-G2 ENCSR125DAD.MLX.Hep-G2 170 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 154 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 169 bp overlap
MTA3 2 datasets
ChIP GM12878 ENCFF681QPL 385 bp overlap
ChIP GM12878 ENCFF681QPL 587 bp overlap
MTERF4 1 dataset
ChIP HepG2 ENCFF831NAM 525 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 156 bp overlap
Mafg 1 dataset
Motif DE_48h DE_48h-Mafg_MA0659.4 12 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 212 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 218 bp overlap
NFIA 2 datasets
Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap
Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap
NFIX 2 datasets
Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap
Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap
NFYB 1 dataset
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 276 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 361 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 241 bp overlap
NR2F6 1 dataset
ChIP HepG2 ENCFF514UJI 345 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 191 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 174 bp overlap
Nfe2l2 1 dataset
Motif DE_48h DE_48h-Nfe2l2_MA0150.3 11 bp overlap
Nr2e3 1 dataset
Motif DE_48h DE_48h-Nr2e3_MA0164.2 6 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 210 bp overlap
ChIP HepG2 ENCFF526NOJ 541 bp overlap
PHF21A 2 datasets
ChIP HepG2 ENCFF525EUW 541 bp overlap
ChIP HepG2 ENCFF525EUW 576 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 517 bp overlap
POLR2A 4 datasets
ChIP neural cell ENCFF604SPB 74 bp overlap
ChIP thyroid gland ENCFF979LRR 491 bp overlap
ChIP transverse colon ENCFF610RWV 138 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 551 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 597 bp overlap
PPARG 4 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 349 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 391 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 352 bp overlap
ChIP HepG2 ENCFF329FBJ 401 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 314 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 357 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 320 bp overlap
RFX2 2 datasets
Motif DE_48h DE_48h-RFX2_MA0600.3 14 bp overlap
Motif DE_60h DE_60h-RFX2_MA0600.3 14 bp overlap
RFX5 2 datasets
Motif DE_48h DE_48h-RFX5_MA0510.3 14 bp overlap
Motif DE_60h DE_60h-RFX5_MA0510.3 14 bp overlap
RXRA 1 dataset
ChIP HepG2 ENCFF204YVO 75 bp overlap
RXRB 2 datasets
ChIP HepG2 ENCFF539ZAY 405 bp overlap
ChIP HepG2 ENCFF539ZAY 405 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 472 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 490 bp overlap
SATB1 1 dataset
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 55 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 608 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 178 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 359 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 308 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 156 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 325 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 150 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 258 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 494 bp overlap
SPEN 1 dataset
ChIP HepG2 ENCFF939VPY 536 bp overlap
SREBF1 1 dataset
Motif DE_36h DE_36h-SREBF1_MA0595.1 10 bp overlap
Spz1 3 datasets
Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap
Motif DE_48h DE_48h-Spz1_MA0111.1 11 bp overlap
Motif DE_60h DE_60h-Spz1_MA0111.1 11 bp overlap
Stat6 1 dataset
Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 533 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 146 bp overlap
TCF7L2 2 datasets
ChIP HepG2 ENCFF510OLG 451 bp overlap
ChIP HepG2 ENCFF510OLG 451 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 455 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 244 bp overlap
TFAP4 2 datasets
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 177 bp overlap
ChIP HepG2 ENCFF932XOY 163 bp overlap
THRA 1 dataset
Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap
THRB 1 dataset
Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap
XRCC5 2 datasets
ChIP HepG2 ENCFF330PDO 402 bp overlap
ChIP HepG2 ENCFF680LVJ 400 bp overlap
ZBTB6 1 dataset
Motif DE_48h DE_48h-ZBTB6_MA1581.2 9 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 231 bp overlap
ZEB1 2 datasets
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ZFP14 2 datasets
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
Motif DE_48h DE_48h-ZFP14_MA1972.1 15 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 319 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 218 bp overlap
ZIC1 1 dataset
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
ZIC5 1 dataset
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
ZMYM3 1 dataset
ChIP HepG2 ENCFF408KTI 477 bp overlap
ZNF157 3 datasets
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
Motif DE_48h DE_48h-ZNF157_MA2331.1 21 bp overlap
Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap
ZNF184 1 dataset
Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap
ZNF217 2 datasets
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 189 bp overlap
ChIP HepG2 ENCFF455XGO 481 bp overlap
ZNF257 1 dataset
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
ZNF292 1 dataset
ChIP HepG2 ENCFF975MAJ 541 bp overlap
ZNF317 1 dataset
ChIP HepG2 ENCFF018ISP 359 bp overlap
ZNF407 2 datasets
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 282 bp overlap
ChIP HepG2 ENCFF537FDC 440 bp overlap
ZNF418 1 dataset
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
ZNF44 1 dataset
ChIP HepG2 ENCFF984YCN 170 bp overlap
ZNF48 1 dataset
ChIP HepG2 ENCFF362CDQ 582 bp overlap
ZNF501 2 datasets
ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 312 bp overlap
ChIP HepG2 ENCFF879XZR 339 bp overlap
ZNF598 3 datasets
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 253 bp overlap
ChIP HepG2 ENCFF356UIO 451 bp overlap
ChIP HepG2 ENCFF356UIO 621 bp overlap
ZNF619 1 dataset
ChIP HepG2 ENCFF388NNO 528 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 619 bp overlap
ZNF85 3 datasets
Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
ZSCAN25 1 dataset
ChIP HepG2 ENCFF265FLD 280 bp overlap
ZSCAN4 3 datasets
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Zfp335 1 dataset
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Zic3 1 dataset
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap