chr5 : 116,704,465 116,705,143
678 bp 133 TFs 0 linked genes
This 678 bp open chromatin element has no linked target genes and is bound by 133 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:116,699,465 – 116,710,143
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
133 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 107 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 165 bp overlap
ARID3A 1 dataset
ChIP GM12878 ENCFF006WWZ 351 bp overlap
ATF2 5 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
Motif ES_0h ES_0h-ATF2_MA1632.2 10 bp overlap
ChIP GM12878 ENCFF521LQJ 423 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 268 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 569 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1470.2 19 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 231 bp overlap
BCL3 2 datasets
ChIP GM12878 ENCFF854PAY 351 bp overlap
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 236 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCFF010ZUU 331 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 443 bp overlap
BRD4 3 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 542 bp overlap
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 490 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 515 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CREB1 2 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
CREM 1 dataset
ChIP GM12878 ENCFF391UGE 361 bp overlap
CUX2 1 dataset
Motif DE_12h DE_12h-CUX2_MA0755.2 9 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCFF681AJV 597 bp overlap
EBF1 5 datasets
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
ChIP GM12878 ENCFF167CZS 273 bp overlap
ChIP GM12878 ENCFF813OXE 258 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 212 bp overlap
ChIP LCL GSE75503.EBF1.LCL 186 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 388 bp overlap
ESR2 1 dataset
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV6 2 datasets
ChIP GM12878 ENCFF105ZMI 400 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 142 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FEZF2 3 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FIGLA 3 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 148 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 192 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 192 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 220 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF437NQS 371 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 451 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-2 283 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 281 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 270 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 240 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 250 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 264 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 537 bp overlap
ChIP GM12878 ENCFF781IAU 401 bp overlap
GLIS3 2 datasets
ChIP H9_plus GSE109562.GLIS3.H9_plus 299 bp overlap
ChIP H9_plus GSE109562.GLIS3.H9_plus 255 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HMBOX1 1 dataset
Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap
HOXC11 1 dataset
Motif DE_12h DE_12h-HOXC11_MA0651.3 11 bp overlap
HOXC12 1 dataset
Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap
Hmga1 1 dataset
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
IKZF1 3 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
ChIP GM12878 ENCFF753XDO 407 bp overlap
ChIP GM12878 ENCFF824TGK 327 bp overlap
IKZF2 5 datasets
ChIP GM12878 ENCFF238LYK 583 bp overlap
ChIP GM12878 ENCFF918AID 551 bp overlap
ChIP GM12878 ENCFF918AID 372 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 426 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 392 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
IRF2 1 dataset
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
IRF5 1 dataset
Motif DE_12h DE_12h-IRF5_MA1420.1 14 bp overlap
IRF6 1 dataset
Motif DE_12h DE_12h-IRF6_MA1509.1 9 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 344 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 398 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 382 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Lhx3 1 dataset
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
MAZ 1 dataset
ChIP GM12878 ENCFF453CES 431 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 323 bp overlap
MEF2A 1 dataset
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 237 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCFF995GXC 152 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 542 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 438 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 216 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
NANOG 4 datasets
ChIP H1 ENCFF747ZPQ 212 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 72 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 404 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 186 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 580 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 295 bp overlap
NFIC 4 datasets
ChIP GM12878 ENCFF259FWL 525 bp overlap
ChIP GM12878 ENCFF259FWL 326 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 85 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 390 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 235 bp overlap
NR2C1 6 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
ChIP GM12878 ENCFF101ELO 357 bp overlap
NR2C2 6 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
NR2F1 3 datasets
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
ChIP GM12878 ENCFF273VKX 385 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 533 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 361 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 167 bp overlap
Nr1H2 5 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 5 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 5 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
Nr2f6 1 dataset
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PAX5 6 datasets
ChIP GM12878 ENCFF482PUW 251 bp overlap
ChIP GM12878 ENCFF503GOV 305 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 215 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 116 bp overlap
ChIP GM12891 ENCFF490KVF 205 bp overlap
ChIP GM12891 ENCSR000BJH.PAX5.GM12891 301 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
PPARG 1 dataset
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Prdm14 1 dataset
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
Prdm4 3 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
RAD21 1 dataset
ChIP GM12878 ENCFF046CBW 265 bp overlap
RARB 1 dataset
Motif DE_12h DE_12h-RARB_MA1552.2 13 bp overlap
RARG 1 dataset
Motif DE_12h DE_12h-RARG_MA1553.2 13 bp overlap
RELA 1 dataset
ChIP GM19099 ENCSR000EBI.RELA.GM19099 156 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 160 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 622 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 156 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 2 datasets
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
Motif ES_0h ES_0h-Rarg_MA0860.1 17 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SKIL 3 datasets
ChIP GM12878 ENCFF171OVM 551 bp overlap
ChIP GM12878 ENCFF171OVM 402 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 501 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCFF130NRZ 367 bp overlap
SMARCA4 2 datasets
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 125 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 189 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SREBF1 2 datasets
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
Motif ES_0h ES_0h-SREBF1_MA0829.3 10 bp overlap
SREBF2 2 datasets
Motif DE_12h DE_12h-SREBF2_MA0828.3 10 bp overlap
Motif ES_0h ES_0h-SREBF2_MA0828.3 10 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCFF951HUW 225 bp overlap
THRA 2 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
THRB 3 datasets
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap
ZBED2 1 dataset
Motif DE_12h DE_12h-ZBED2_MA1971.2 7 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCFF346DYM 63 bp overlap
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 149 bp overlap
ZEB1 5 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 127 bp overlap
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 139 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF135 2 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF136 2 datasets
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF213 4 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF24 1 dataset
ChIP GM12878 ENCFF688STO 341 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 249 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 251 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 457 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 427 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap