chr4 : 146,030,092 146,030,481
389 bp 125 TFs 0 linked genes
This 389 bp open chromatin element has no linked target genes and is bound by 125 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:146,025,092 – 146,035,481
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AR 3 datasets
ChIP 22Rv1 GSE85558.AR.22Rv1 352 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 134 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 111 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 204 bp overlap
ASH2L 2 datasets
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 389 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 389 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCFF521LQJ 275 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCFF576UEQ 174 bp overlap
BCL3 2 datasets
ChIP GM12878 ENCFF854PAY 192 bp overlap
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 101 bp overlap
BCL6 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 122 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 135 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 242 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 144 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 143 bp overlap
BRD4 2 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 389 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 361 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 158 bp overlap
CBX5 1 dataset
ChIP GM12878 ENCFF542UDC 248 bp overlap
CHD2 1 dataset
ChIP GM12878 ENCFF697XCL 207 bp overlap
CHD4 1 dataset
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 327 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 389 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 232 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 252 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCFF681AJV 288 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 166 bp overlap
ChIP GM12878 ENCFF813OXE 139 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 57 bp overlap
ChIP LCL GSE75503.EBF1.LCL 164 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 257 bp overlap
ELF1 4 datasets
ChIP GM12878 ENCFF432UGA 219 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 116 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 186 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 282 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 389 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 389 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 389 bp overlap
ESRRA 1 dataset
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
ESRRB 1 dataset
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
ETS1 1 dataset
ChIP GM12878 ENCFF019FEB 54 bp overlap
ETV6 3 datasets
ChIP GM12878 ENCFF105ZMI 232 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 154 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 136 bp overlap
Esrrg 1 dataset
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
FOXA1 2 datasets
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 165 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 254 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 234 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 77 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
GABPA 3 datasets
ChIP GM12878 ENCFF872TWR 274 bp overlap
ChIP GM12878 ENCFF872TWR 316 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 132 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 369 bp overlap
GATA6 1 dataset
ChIP YCC-3 GSE51705.GATA6.YCC-3 184 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 330 bp overlap
ChIP GM12878 ENCFF781IAU 389 bp overlap
GRHL2 3 datasets
ChIP HBE GSE46194.GRHL2.HBE 223 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 213 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 285 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 120 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 117 bp overlap
HNF4A 7 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 200 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 177 bp overlap
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 389 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 271 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 309 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 354 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF753XDO 387 bp overlap
ChIP GM12878 ENCFF753XDO 389 bp overlap
ChIP GM12878 ENCFF824TGK 389 bp overlap
IKZF2 3 datasets
ChIP GM12878 ENCFF238LYK 233 bp overlap
ChIP GM12878 ENCFF918AID 389 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 324 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 120 bp overlap
Isl1 1 dataset
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 141 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 55 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 76 bp overlap
KDM1A 4 datasets
ChIP H1 ENCFF696SGD 94 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 185 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 127 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 82 bp overlap
KDM5B 3 datasets
ChIP SUM159 GSE46055.KDM5B.SUM159 125 bp overlap
ChIP SUM185 GSE46055.KDM5B.SUM185 145 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 155 bp overlap
MAX 2 datasets
ChIP P493-6 GSE36354.MAX.P493-6 91 bp overlap
ChIP P493-6_CMYC_24H GSE36354.MAX.P493-6_CMYC_24H 113 bp overlap
MAZ 1 dataset
ChIP GM12878 ENCFF404CEP 176 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 181 bp overlap
MEF2A 2 datasets
ChIP GM12878 ENCFF652BHX 115 bp overlap
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 73 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 134 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCFF615CWQ 54 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCFF681QPL 311 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 86 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 279 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 184 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 286 bp overlap
NBN 1 dataset
ChIP GM12878 ENCFF213ZNN 389 bp overlap
NCOR2 2 datasets
ChIP LS180_125 GSE39277.NCOR2.LS180_125 94 bp overlap
ChIP OCI-Ly1 GSE29282.NCOR2.OCI-Ly1 136 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 389 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 251 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 250 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 246 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 130 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 121 bp overlap
NR2C1 3 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
ChIP GM12878 ENCFF101ELO 209 bp overlap
ChIP GM12878 ENCSR784VIQ.NR2C1.GM12878 248 bp overlap
NR2C2 2 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR2F1 4 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
ChIP GM12878 ENCFF273VKX 326 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 352 bp overlap
NR2F2 3 datasets
Motif DE_12h DE_12h-NR2F2_MA1111.2 7 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 168 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 280 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
NR6A1 1 dataset
Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
Nr2f6 1 dataset
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 144 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 108 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 229 bp overlap
POLR2A 4 datasets
ChIP GM12892 ENCFF506PGQ 342 bp overlap
ChIP GM18505 ENCFF311CYB 318 bp overlap
ChIP GM18505 ENCFF311CYB 305 bp overlap
ChIP transverse colon ENCFF610RWV 367 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 322 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
PPARG 4 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 301 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 389 bp overlap
ChIP OE33 GSE143195.PPARG.OE33 337 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 205 bp overlap
Ppara 1 dataset
Motif DE_12h DE_12h-Ppara_MA2338.1 7 bp overlap
RAD21 3 datasets
ChIP GM12878 ENCFF101UQZ 55 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 174 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 220 bp overlap
RB1 1 dataset
ChIP GM12878 ENCFF495RZI 278 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 158 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 89 bp overlap
ChIP K562 ENCFF248CGR 130 bp overlap
ChIP K562 ENCFF957ORK 130 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 81 bp overlap
RELA 13 datasets
ChIP CD4_Th1_DMSO GSE62482.RELA.CD4_Th1_DMSO 133 bp overlap
ChIP GM10847 ENCSR000DYM.RELA.GM10847 126 bp overlap
ChIP GM12878 ENCFF513IEN 185 bp overlap
ChIP GM12878 ENCSR000EAG.RELA.GM12878 192 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 187 bp overlap
ChIP GM12892 ENCSR000EAN.RELA.GM12892 133 bp overlap
ChIP GM15510 ENCSR000EAQ.RELA.GM15510 133 bp overlap
ChIP GM18951 ENCSR000EBD.RELA.GM18951 96 bp overlap
ChIP GM19099 ENCSR000EBI.RELA.GM19099 148 bp overlap
ChIP GM19193 ENCSR000EBM.RELA.GM19193 104 bp overlap
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 134 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 267 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.RELA.THP-1_eGFP-Pam3csk-4h 196 bp overlap
RELB 4 datasets
ChIP GM12878 ENCFF217ADF 300 bp overlap
ChIP GM12878 ENCFF217ADF 389 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 333 bp overlap
ChIP L1236 GSE63736.RELB.L1236 52 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 285 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 167 bp overlap
RXR 2 datasets
ChIP LS180 GSE31939.RXR.LS180 120 bp overlap
ChIP LS180_125 GSE31939.RXR.LS180_125 172 bp overlap
RXRA 1 dataset
ChIP H1 ENCFF570NHK 201 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 349 bp overlap
ChIP GM12878 ENCFF171OVM 389 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 171 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 361 bp overlap
SP1 4 datasets
ChIP GM12878 ENCFF620LDJ 152 bp overlap
ChIP GM12878 ENCSR000BHK.SP1.GM12878 167 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 224 bp overlap
SPI1 6 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 60 bp overlap
ChIP GM12878 ENCFF134LCP 92 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 231 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 134 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 56 bp overlap
SPIB 2 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 138 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 122 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
TAF1 1 dataset
ChIP GM12878 ENCSR000BGS.TAF1.GM12878 181 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 89 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 188 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 75 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 144 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 132 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCFF919OMX 315 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
YY1 3 datasets
ChIP GM12878 ENCFF908JTL 234 bp overlap
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 102 bp overlap
ChIP GM12892 ENCFF802MHJ 158 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZFP36 1 dataset
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 86 bp overlap
ZMYM3 1 dataset
ChIP GM12878 GSE97661.ZMYM3.GM12878 97 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF597 1 dataset
ChIP GM12878 GSE97661.ZNF597.GM12878 153 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap