chr4 : 25,865,717 – 25,865,884
167 bp 108 TFs 1 linked gene
This 167 bp open chromatin element is linked to SEL1L3 and is bound by 108 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SEL1L3 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:25,860,717 – 25,870,884
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 167 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 167 bp overlap
ATF3 3 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 167 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 167 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 116 bp overlap
ATF7 2 datasets
ChIP K-562 ENCSR972ZBV.ATF7.K-562 167 bp overlap
ChIP K562 ENCFF308SKS 167 bp overlap
BCL11A 1 dataset
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 74 bp overlap
BRD4 5 datasets
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 166 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 133 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 167 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 167 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 82 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 116 bp overlap
CBX3 1 dataset
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 140 bp overlap
CDX2 3 datasets
ChIP LS180 GSE31939.CDX2.LS180 167 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 140 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 155 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 167 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 167 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 159 bp overlap
CREBBP 5 datasets
ChIP LS180_125 GSE39277.CREBBP.LS180_125 134 bp overlap
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 167 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 167 bp overlap
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 167 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 167 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 115 bp overlap
CTBP1 3 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 167 bp overlap
ChIP K562 ENCFF403WPG 167 bp overlap
ChIP K562 ENCFF403WPG 167 bp overlap
CTCF 2 datasets
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 103 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 167 bp overlap
EP300 3 datasets
ChIP Ishikawa ENCFF364ZWT 167 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 167 bp overlap
ChIP K-562 ENCSR000EGE.EP300.K-562 116 bp overlap
ESR1 3 datasets
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 109 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 165 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 167 bp overlap
ESRRA 3 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 167 bp overlap
ChIP K562 ENCFF968PEP 132 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 167 bp overlap
FOS 2 datasets
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 167 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 167 bp overlap
FOSL1 4 datasets
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 127 bp overlap
ChIP HCT116 ENCFF540ZXN 167 bp overlap
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 167 bp overlap
ChIP K562 ENCFF455MKD 167 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 93 bp overlap
GATA6 1 dataset
ChIP PATU8988 GSE47535.GATA6.PATU8988 158 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 117 bp overlap
HNF4A 2 datasets
ChIP IM95 GSE114018.HNF4A.IM95 167 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 167 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 118 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 137 bp overlap
ChIP K562 ENCFF348IBL 167 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 161 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 167 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 167 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 167 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 167 bp overlap
ChIP K-562 ENCSR000FAH.JUN.K-562 158 bp overlap
ChIP K-562 ENCSR000EFS.JUN.K-562 134 bp overlap
ChIP K562 ENCFF455LLS 125 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 167 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 167 bp overlap
JUNB 4 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 167 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 133 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 167 bp overlap
ChIP keratinocyte_CTR GSE139685.JUNB.keratinocyte_CTR 113 bp overlap
JUND 4 datasets
ChIP HCT116 ENCFF748ZQX 167 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 153 bp overlap
ChIP K562 ENCFF336RCR 167 bp overlap
ChIP K562 ENCFF830LVJ 160 bp overlap
KDM1A 2 datasets
ChIP K-562 GSE117944.KDM1A.K-562 167 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 167 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 167 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 167 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 167 bp overlap
KLF4 2 datasets
ChIP PDAC GSE64557.KLF4.PDAC 167 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 167 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 167 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 162 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 152 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 167 bp overlap
KMT2B-D 1 dataset
ChIP SW480 GSE115985.KMT2B-D.SW480 141 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 156 bp overlap
ChIP K562 ENCFF320EQC 167 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 167 bp overlap
MAX 7 datasets
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 93 bp overlap
ChIP HCT116 ENCFF810LEN 167 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 110 bp overlap
ChIP Ishikawa ENCFF064TDQ 167 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 167 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 167 bp overlap
ChIP K562 ENCFF110LJS 167 bp overlap
MAZ 4 datasets
ChIP HEK293 ENCFF994GSG 167 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 167 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 167 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 167 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 143 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 154 bp overlap
ChIP K562 ENCFF731XJJ 108 bp overlap
MYC 1 dataset
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 135 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 117 bp overlap
NFE2L2 1 dataset
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 166 bp overlap
NFIC 4 datasets
ChIP Ishikawa ENCFF029AAD 167 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 167 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 123 bp overlap
ChIP K562 ENCFF167YID 99 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 167 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 167 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 167 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 167 bp overlap
NR3C1 2 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 75 bp overlap
ChIP MCF-10A_EGF_DEX_20min GSE102355.NR3C1.MCF-10A_EGF_DEX_20min 148 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 167 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 167 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 83 bp overlap
ChIP K562 ENCFF236IUS 50 bp overlap
POLR2A 7 datasets
ChIP HCT116 ENCFF508RDJ 167 bp overlap
ChIP Peyer's patch ENCFF767HVN 167 bp overlap
ChIP Raji ENCFF613VGX 167 bp overlap
ChIP stomach ENCFF820WZN 132 bp overlap
ChIP transverse colon ENCFF607LKE 167 bp overlap
ChIP transverse colon ENCFF610RWV 167 bp overlap
ChIP vagina ENCFF305NWS 167 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 167 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 167 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 157 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 165 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 167 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 167 bp overlap
RELA 2 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 167 bp overlap
ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.RELA.HeLa-B2_P65KD_TA_TNFA 74 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 132 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 167 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 167 bp overlap
SMARCA4 12 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 80 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 151 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 115 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 109 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 137 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 130 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 66 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 146 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 167 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 167 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 167 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 167 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 167 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 167 bp overlap
SOX2 1 dataset
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 167 bp overlap
SOX4 1 dataset
ChIP HCC1954_TGFb GSE104760.SOX4.HCC1954_TGFb 158 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 167 bp overlap
SP1 1 dataset
ChIP HCT116 ENCFF800LBN 167 bp overlap
SP2 3 datasets
ChIP HEK293 ENCFF181QXT 147 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 167 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 167 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 91 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 167 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 164 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 167 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 167 bp overlap
SREBP2 1 dataset
ChIP monocyte GSE129202.SREBP2.monocyte 115 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 167 bp overlap
STAT3 3 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 134 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 111 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 147 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 167 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 97 bp overlap
TAF1 1 dataset
ChIP Ishikawa ENCSR000BTO.TAF1.Ishikawa 143 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 167 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 167 bp overlap
TCF3 1 dataset
ChIP Ramos GSE139810.TCF3.Ramos 108 bp overlap
TCF4 1 dataset
ChIP LS180 GSE31939.TCF4.LS180 97 bp overlap
TCF7L2 3 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 167 bp overlap
ChIP HeLa-S3 ENCSR000EVE.TCF7L2.HeLa-S3 145 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 167 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 144 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 167 bp overlap
TEAD4 9 datasets
ChIP HUCCT1 GSE68296.TEAD4.HUCCT1 130 bp overlap
ChIP Ishikawa ENCFF772OTG 64 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 167 bp overlap
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 145 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 167 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 167 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 167 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 167 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 136 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 167 bp overlap
TP63 1 dataset
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 157 bp overlap
USF1 6 datasets
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 97 bp overlap
ChIP HCT116 ENCFF330PYP 167 bp overlap
ChIP Ishikawa ENCFF728IEG 136 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 138 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 72 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 121 bp overlap
USF2 2 datasets
ChIP HeLa-S3 ENCFF765YUZ 159 bp overlap
ChIP HeLa-S3 ENCSR000ECW.USF2.HeLa-S3 140 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 167 bp overlap
YAP1 1 dataset
ChIP MCF-10A GSE97972.YAP1.MCF-10A 114 bp overlap
YY1 2 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 153 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 167 bp overlap
YY1AP1 4 datasets
ChIP MCF-10A_DOX GSE115787.YY1AP1.MCF-10A_DOX 126 bp overlap
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 167 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 167 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 167 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 167 bp overlap
ZBTB7A 1 dataset
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 130 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 130 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 167 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 167 bp overlap
ChIP K562 ENCFF795CMH 167 bp overlap
ChIP K562 ENCFF975RXS 167 bp overlap
ZKSCAN1 1 dataset
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 64 bp overlap
ZNF18 1 dataset
ChIP HEK293 GSE76494.ZNF18.HEK293 105 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 167 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 68 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 155 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 167 bp overlap
ZNF394 1 dataset
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 167 bp overlap
ZNF444 1 dataset
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 70 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 138 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 113 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 167 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 90 bp overlap
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