chr8 : 38,541,080 38,541,513
433 bp 114 TFs 4 linked genes
This 433 bp open chromatin element is linked to 4 target genes and is bound by 114 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
FGFR1 72.6 kb Distal Multiome
NSD3 159.0 kb Distal Multiome
TACC1 216.0 kb Distal Multiome
PLPP5 272.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:38,536,080 – 38,546,513
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
114 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP HAP1 GSE108387.ARID1A.HAP1 151 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 413 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 180 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 131 bp overlap
BRCA1 2 datasets
ChIP H1 ENCFF288NOI 294 bp overlap
ChIP WA01 ENCSR000EBX.BRCA1.WA01 235 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 130 bp overlap
BRD4 2 datasets
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 310 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 433 bp overlap
CEBPB 2 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 135 bp overlap
ChIP A549 ENCFF797MXZ 159 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 242 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 183 bp overlap
CREB1 2 datasets
ChIP A-549 ENCSR000BRC.CREB1.A-549 130 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 188 bp overlap
CTCF 2 datasets
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 127 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 172 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 268 bp overlap
ELK1 1 dataset
Motif ES_0h ES_0h-ELK1_MA0028.3 9 bp overlap
ELK3 1 dataset
Motif ES_0h ES_0h-ELK3_MA0759.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 174 bp overlap
EP300 2 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 366 bp overlap
ChIP A549 ENCFF960ZEI 414 bp overlap
ERF 1 dataset
Motif ES_0h ES_0h-ERF_MA0760.2 9 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 74 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 128 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Female_1 GSE104399.ESR1.breast_tumor_Female_1 224 bp overlap
ETS1 1 dataset
Motif ES_0h ES_0h-ETS1_MA0098.4 9 bp overlap
ETS2 1 dataset
Motif ES_0h ES_0h-ETS2_MA1484.2 9 bp overlap
ETV2 1 dataset
Motif ES_0h ES_0h-ETV2_MA0762.2 9 bp overlap
ETV4 1 dataset
Motif ES_0h ES_0h-ETV4_MA0764.4 9 bp overlap
ETV5 1 dataset
Motif ES_0h ES_0h-ETV5_MA0765.4 9 bp overlap
FEV 1 dataset
Motif ES_0h ES_0h-FEV_MA0156.4 9 bp overlap
FLI1 1 dataset
Motif ES_0h ES_0h-FLI1_MA0475.3 9 bp overlap
FOSL2 2 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 287 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 323 bp overlap
FOXA1 3 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 144 bp overlap
ChIP breast_tumor_Female_1 GSE104399.FOXA1.breast_tumor_Female_1 433 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 433 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 310 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 137 bp overlap
GABPA 3 datasets
ChIP VCaP GSE49091.GABPA.VCaP 140 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 157 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 99 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
GATA1::TAL1 3 datasets
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif ES_0h ES_0h-GATA1TAL1_MA0140.3 17 bp overlap
GATA3 2 datasets
ChIP A-549 ENCSR000BTI.GATA3.A-549 287 bp overlap
ChIP A549 ENCFF226FVV 361 bp overlap
GATA4 10 datasets
ChIP A-549 GSE85002.GATA4.A-549 356 bp overlap
ChIP DE DE-GATA4-1 433 bp overlap
ChIP DE DE-GATA4-2 433 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif ES_0h ES_0h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 375 bp overlap
ChIP foregut GSE117136.GATA4.foregut 433 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 433 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 433 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 274 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 197 bp overlap
ChIP DE DE-GATA6-1 433 bp overlap
ChIP DE DE-GATA6-2 433 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 433 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 433 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 433 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 433 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 433 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 411 bp overlap
ChIP foregut GSE117136.GATA6.foregut 433 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 433 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 433 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 433 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 433 bp overlap
HAND2 2 datasets
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 260 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 389 bp overlap
ChIP K562 ENCFF055GAZ 178 bp overlap
ChIP K562 ENCFF317JJX 176 bp overlap
HNF1A 2 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 268 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 220 bp overlap
HNF1B 4 datasets
ChIP H9 ERP004206.HNF1B.H9 217 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 395 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 240 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 379 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 187 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 187 bp overlap
HSF1 8 datasets
ChIP HCT-116_A10_43 GSE152144.HSF1.HCT-116_A10_43 282 bp overlap
ChIP HCT-116_A8_43 GSE152144.HSF1.HCT-116_A8_43 264 bp overlap
ChIP HCT-116_A9_43 GSE152144.HSF1.HCT-116_A9_43 232 bp overlap
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 226 bp overlap
ChIP U2OS_HEAT GSE60984.HSF1.U2OS_HEAT 119 bp overlap
ChIP U2OS_HEAT_20 GSE60984.HSF1.U2OS_HEAT_20 136 bp overlap
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 271 bp overlap
ChIP breast_tumor GSE38901.HSF1.breast_tumor 211 bp overlap
IRF8 3 datasets
Motif DE_48h DE_48h-IRF8_MA0652.2 13 bp overlap
Motif DE_60h DE_60h-IRF8_MA0652.2 13 bp overlap
Motif ES_0h ES_0h-IRF8_MA0652.2 13 bp overlap
JDP2 2 datasets
Motif DE_48h DE_48h-JDP2_MA0655.1 9 bp overlap
Motif DE_60h DE_60h-JDP2_MA0655.1 9 bp overlap
JUN 4 datasets
ChIP A549 ENCFF191QZG 400 bp overlap
ChIP A549 ENCFF191QZG 379 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 215 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 263 bp overlap
MAF::NFE2 2 datasets
Motif DE_48h DE_48h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_60h DE_60h-MAFNFE2_MA0501.2 11 bp overlap
MAFG::NFE2L1 2 datasets
Motif DE_48h DE_48h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_60h DE_60h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAX 2 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 216 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 171 bp overlap
MED1 1 dataset
ChIP A-549 GSE76893.MED1.A-549 300 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 198 bp overlap
Mafg 2 datasets
Motif DE_48h DE_48h-Mafg_MA0659.4 12 bp overlap
Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap
NANOG 8 datasets
ChIP H1 ENCFF747ZPQ 239 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 406 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 260 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 190 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 274 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 369 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 193 bp overlap
ChIP hESC GSE18292.NANOG.hESC 103 bp overlap
NCOA2 1 dataset
ChIP HepG2 ENCFF853BJJ 418 bp overlap
NFE2 2 datasets
Motif DE_48h DE_48h-NFE2_MA0841.2 10 bp overlap
Motif DE_60h DE_60h-NFE2_MA0841.2 10 bp overlap
NFIC 1 dataset
Motif DE_48h DE_48h-NFIC_MA0161.3 7 bp overlap
NIPBL 1 dataset
ChIP A-549 GSE76893.NIPBL.A-549 190 bp overlap
NR2C2 2 datasets
Motif DE_48h DE_48h-NR2C2_MA0504.2 14 bp overlap
Motif ES_0h ES_0h-NR2C2_MA0504.2 14 bp overlap
NR2F1 2 datasets
Motif DE_48h DE_48h-NR2F1_MA1537.2 13 bp overlap
Motif ES_0h ES_0h-NR2F1_MA1537.2 13 bp overlap
NR2F2 2 datasets
ChIP Hep-G2 ENCSR000BVM.NR2F2.Hep-G2 125 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 199 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 138 bp overlap
Nfe2l2 2 datasets
Motif DE_48h DE_48h-Nfe2l2_MA0150.3 11 bp overlap
Motif DE_60h DE_60h-Nfe2l2_MA0150.3 11 bp overlap
Nr2e1 2 datasets
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 80 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 414 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 176 bp overlap
POU5F1 6 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 392 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 266 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 122 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 433 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 329 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 188 bp overlap
PPARA::RXRA 2 datasets
Motif DE_48h DE_48h-PPARARXRA_MA1148.2 17 bp overlap
Motif DE_60h DE_60h-PPARARXRA_MA1148.2 17 bp overlap
PPARD 2 datasets
Motif DE_48h DE_48h-PPARD_MA1550.2 14 bp overlap
Motif ES_0h ES_0h-PPARD_MA1550.2 14 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap
Pparg::Rxra 2 datasets
Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
RAD21 2 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 113 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 161 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 118 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 224 bp overlap
REST 1 dataset
ChIP A-549 ENCSR000BQP.REST.A-549 190 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 224 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 379 bp overlap
ChIP H1 ENCFF896IJG 290 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 208 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 157 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 401 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 311 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 306 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 206 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 182 bp overlap
SMARCA4 9 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 433 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 109 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 181 bp overlap
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 240 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 372 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 133 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 66 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 237 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 305 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 257 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 123 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 238 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 244 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 197 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 323 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 242 bp overlap
SP1 2 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 348 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 297 bp overlap
SP5 3 datasets
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_7aa GSE139053.SS18-SSX.fibroblast_7aa 114 bp overlap
STAT1 1 dataset
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 166 bp overlap
Sox17 1 dataset
Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap
Sox7 1 dataset
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TBP 3 datasets
ChIP hESC GSE122298.TBP.hESC 217 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 115 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 110 bp overlap
TBX20 2 datasets
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
Motif ES_0h ES_0h-TBX20_MA0689.1 11 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 282 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 272 bp overlap
THRB 2 datasets
Motif DE_48h DE_48h-THRB_MA1574.2 13 bp overlap
Motif ES_0h ES_0h-THRB_MA1574.2 13 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 272 bp overlap
USF1 3 datasets
Motif DE_48h DE_48h-USF1_MA0093.4 10 bp overlap
Motif DE_60h DE_60h-USF1_MA0093.4 10 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 125 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 415 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 273 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 146 bp overlap
ZKSCAN3 3 datasets
Motif DE_48h DE_48h-ZKSCAN3_MA1973.2 14 bp overlap
Motif DE_60h DE_60h-ZKSCAN3_MA1973.2 14 bp overlap
Motif ES_0h ES_0h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 259 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 200 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 206 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 95 bp overlap
ZNF418 2 datasets
Motif DE_48h DE_48h-ZNF418_MA1980.1 15 bp overlap
Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap
ZNF530 2 datasets
Motif DE_48h DE_48h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF652 2 datasets
Motif DE_48h DE_48h-ZNF652_MA1657.2 9 bp overlap
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
ZNF675 1 dataset
Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap
Zbtb2 1 dataset
Motif ES_0h ES_0h-Zbtb2_MA2340.1 10 bp overlap