chr1 : 99,757,951 99,758,464
513 bp 125 TFs 1 linked gene
This 513 bp open chromatin element is linked to FRRS1 and is bound by 125 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FRRS1 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:99,752,951 – 99,763,464
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 160 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 114 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 438 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 141 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 480 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 446 bp overlap
BACH1 6 datasets
ChIP GM12878 ENCFF576UEQ 158 bp overlap
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 309 bp overlap
ChIP GM12878 ENCSR585CVE.BACH1.GM12878 206 bp overlap
ChIP H1 ENCFF282VDB 321 bp overlap
ChIP Hep-G2 ENCSR699TNT.BACH1.Hep-G2 127 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 234 bp overlap
BACH2 4 datasets
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 294 bp overlap
Motif DE_36h DE_36h-BACH2_MA1470.2 19 bp overlap
Motif DE_48h DE_48h-BACH2_MA1470.2 19 bp overlap
ChIP OCI-Ly7 GSE44420.BACH2.OCI-Ly7 229 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 282 bp overlap
BRD4 3 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 337 bp overlap
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 485 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 462 bp overlap
CBX3 1 dataset
ChIP HCT116 ENCFF947BOL 431 bp overlap
CEBPB 1 dataset
ChIP HCT116 ENCFF097OLY 408 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 119 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 294 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 392 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 200 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCFF692SMY 191 bp overlap
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 338 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 468 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 440 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 449 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 460 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 204 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 174 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 299 bp overlap
FOSL1 2 datasets
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 206 bp overlap
ChIP HCT116 ENCFF540ZXN 397 bp overlap
FOXA1 1 dataset
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 338 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 513 bp overlap
ChIP DE DE-FOXA2-2 482 bp overlap
GATA2 7 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
ChIP HepG2 ENCFF905PYM 371 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 275 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 262 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 256 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 238 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 513 bp overlap
ChIP DE DE-GATA4-2 513 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 208 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 389 bp overlap
GATA5 1 dataset
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 188 bp overlap
ChIP DE DE-GATA6-1 513 bp overlap
ChIP DE DE-GATA6-2 513 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 493 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 476 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 436 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 513 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 428 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 443 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 142 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 222 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 289 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 337 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 238 bp overlap
Gata3 2 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap
HLF 3 datasets
Motif DE_36h DE_36h-HLF_MA0043.4 9 bp overlap
Motif DE_48h DE_48h-HLF_MA0043.4 9 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 206 bp overlap
Hic1 2 datasets
Motif DE_36h DE_36h-Hic1_MA0739.2 8 bp overlap
Motif DE_48h DE_48h-Hic1_MA0739.2 8 bp overlap
Hnf1A 1 dataset
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 5 datasets
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
ChIP GM12878 ENCFF616FJX 513 bp overlap
ChIP GM12878 ENCFF616FJX 359 bp overlap
ChIP GM12878 ENCFF753XDO 409 bp overlap
ChIP GM12878 ENCFF824TGK 408 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF238LYK 372 bp overlap
ChIP GM12878 ENCFF918AID 352 bp overlap
IRF3 1 dataset
Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 337 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 415 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 376 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 513 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 336 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 431 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 255 bp overlap
JUND 2 datasets
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 236 bp overlap
ChIP HCT116 ENCFF748ZQX 397 bp overlap
MAF 1 dataset
Motif DE_36h DE_36h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_36h DE_36h-MAFA_MA1521.2 13 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 345 bp overlap
ChIP K562 ENCFF455EEO 443 bp overlap
MAFK 1 dataset
ChIP H1 ENCFF854XWE 285 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 200 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 214 bp overlap
Mafg 1 dataset
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
Mecom 2 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 352 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 212 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 251 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 245 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCFF340KVJ 341 bp overlap
NFE2 4 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 371 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 206 bp overlap
ChIP K562 ENCFF047YKA 189 bp overlap
ChIP K562 ENCFF163BSI 265 bp overlap
NFE2L1 1 dataset
ChIP K562 ENCFF138UHK 321 bp overlap
NFE2L2 4 datasets
ChIP Hep-G2 ENCSR488EES.NFE2L2.Hep-G2 136 bp overlap
ChIP HepG2 ENCFF178DRC 257 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 118 bp overlap
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 130 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 171 bp overlap
NFIL3 2 datasets
Motif DE_36h DE_36h-NFIL3_MA0025.3 9 bp overlap
Motif DE_48h DE_48h-NFIL3_MA0025.3 9 bp overlap
NFYB 1 dataset
Motif DE_36h DE_36h-NFYB_MA0502.3 9 bp overlap
NR2F1 2 datasets
Motif DE_36h DE_36h-NR2F1_MA1537.2 13 bp overlap
Motif DE_60h DE_60h-NR2F1_MA1537.2 13 bp overlap
NR4A1 2 datasets
Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap
Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap
Nr2f6 2 datasets
Motif DE_36h DE_36h-Nr2f6_MA0677.2 13 bp overlap
Motif DE_60h DE_60h-Nr2f6_MA0677.2 13 bp overlap
OSR1 3 datasets
Motif DE_36h DE_36h-OSR1_MA1542.2 8 bp overlap
Motif DE_48h DE_48h-OSR1_MA1542.2 8 bp overlap
Motif DE_60h DE_60h-OSR1_MA1542.2 8 bp overlap
OSR2 3 datasets
Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap
Motif DE_48h DE_48h-OSR2_MA1646.2 8 bp overlap
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
PBX3 1 dataset
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 158 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 160 bp overlap
PKNOX1 3 datasets
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCFF589FCY 329 bp overlap
ChIP GM12878 ENCFF589FCY 126 bp overlap
POLR2A 3 datasets
ChIP stomach ENCFF607ZPU 325 bp overlap
ChIP stomach ENCFF607ZPU 285 bp overlap
ChIP stomach ENCFF820WZN 147 bp overlap
POU2F1 3 datasets
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 242 bp overlap
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_48h DE_48h-POU2F1SOX2_MA1962.1 17 bp overlap
POU3F1 2 datasets
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap
POU4F2 1 dataset
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
POU5F1 4 datasets
Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap
Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 256 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 274 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 167 bp overlap
Pou5f1::Sox2 3 datasets
Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_48h DE_48h-Pou5f1Sox2_MA0142.1 15 bp overlap
Pparg::Rxra 3 datasets
Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
Ptf1A 1 dataset
Motif DE_36h DE_36h-Ptf1A_MA1618.2 9 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 513 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 454 bp overlap
SCRT1 3 datasets
Motif DE_36h DE_36h-SCRT1_MA0743.3 10 bp overlap
Motif DE_48h DE_48h-SCRT1_MA0743.3 10 bp overlap
Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap
SCRT2 3 datasets
Motif DE_36h DE_36h-SCRT2_MA0744.3 10 bp overlap
Motif DE_48h DE_48h-SCRT2_MA0744.3 10 bp overlap
Motif DE_60h DE_60h-SCRT2_MA0744.3 10 bp overlap
SIN3A 1 dataset
ChIP HCT116 ENCFF203YBB 513 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 125 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 253 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 268 bp overlap
SMARCA4 7 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 229 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 246 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 262 bp overlap
ChIP K562 ENCFF506JCB 466 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 216 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 333 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 220 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 247 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 334 bp overlap
ChIP K562 ENCFF690CFF 470 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 357 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 326 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 444 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 328 bp overlap
ChIP K562 ENCFF059YCJ 171 bp overlap
SP1 2 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 328 bp overlap
ChIP HCT116 ENCFF800LBN 437 bp overlap
SPI1 2 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 130 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 144 bp overlap
SPIB 1 dataset
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 167 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
Stat5a 1 dataset
Motif DE_36h DE_36h-Stat5a_MA1624.2 9 bp overlap
TCF7L1 1 dataset
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 2 datasets
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 292 bp overlap
TEAD4 1 dataset
ChIP HCT116 ENCFF526YYD 277 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 135 bp overlap
TRPS1 2 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 232 bp overlap
Yy1 1 dataset
Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap
ZBTB18 1 dataset
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
ZBTB32 2 datasets
Motif DE_36h DE_36h-ZBTB32_MA1580.1 10 bp overlap
Motif DE_48h DE_48h-ZBTB32_MA1580.1 10 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 145 bp overlap
ZEB1 1 dataset
ChIP Hep-G2 ENCSR000BVN.ZEB1.Hep-G2 200 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 293 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 285 bp overlap
ChIP K562 ENCFF795CMH 137 bp overlap
ChIP K562 ENCFF975RXS 461 bp overlap
ZNF16 3 datasets
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
ZNF184 1 dataset
Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 322 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 417 bp overlap
ZNF354A 2 datasets
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
ZNF530 1 dataset
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
ZNF701 1 dataset
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap