chr2 : 12,109,507 12,109,759
252 bp 115 TFs 0 linked genes
This 252 bp open chromatin element has no linked target genes and is bound by 115 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:12,104,507 – 12,114,759
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
115 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 252 bp overlap
ChIP K562 ENCFF938UXQ 252 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 187 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 232 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 220 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 87 bp overlap
BRD3 3 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 227 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 201 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 200 bp overlap
BRD4 10 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 216 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 236 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 202 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 247 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 251 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 252 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 252 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 252 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 225 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 224 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 252 bp overlap
ChIP K562 ENCFF963TXY 252 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 252 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 252 bp overlap
ChIP K562 ENCFF673OEZ 252 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 205 bp overlap
CREB1 2 datasets
ChIP K-562 ENCSR000BSO.CREB1.K-562 194 bp overlap
ChIP K562 ENCFF175LMX 252 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 121 bp overlap
ChIP K562 ENCFF574LOW 168 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 252 bp overlap
ChIP K562 ENCFF775HUO 159 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 183 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 77 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 187 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 185 bp overlap
EP300 5 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 99 bp overlap
ChIP HepG2 ENCFF354ACD 140 bp overlap
ChIP K-562 ENCSR000EGE.EP300.K-562 156 bp overlap
ChIP K562 ENCFF226VMS 212 bp overlap
ChIP esophagus muscularis mucosa ENCFF406RGZ 99 bp overlap
ETS1 1 dataset
ChIP K-562 ENCSR000BKQ.ETS1.K-562 115 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 252 bp overlap
ChIP DE DE-FOXA2-2 252 bp overlap
ChIP HepG2 ENCFF570ABM 65 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 51 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 135 bp overlap
FOXJ2 1 dataset
ChIP K562 ENCFF457GZC 252 bp overlap
FOXK1 2 datasets
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 85 bp overlap
ChIP HepG2 ENCFF635XWY 87 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR508DQA.FOXK2.K-562 139 bp overlap
ChIP K562 ENCFF245WKP 90 bp overlap
FOXM1 1 dataset
ChIP K-562 ENCSR429QPP.FOXM1.K-562 194 bp overlap
FOXO1 1 dataset
ChIP HepG2 ENCFF088FIR 84 bp overlap
FOXP1 1 dataset
ChIP HepG2 ENCFF823ERM 83 bp overlap
GABPA 2 datasets
ChIP K-562 ENCSR000BLO.GABPA.K-562 252 bp overlap
ChIP K562 ENCFF996TSW 252 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 197 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 241 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 250 bp overlap
GATA2 5 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 232 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 252 bp overlap
ChIP K-562 ENCSR257RKC.GATA2.K-562 178 bp overlap
ChIP K562 ENCFF088XQT 252 bp overlap
ChIP K562 ENCFF544PCK 65 bp overlap
GATA3 2 datasets
ChIP Kelly GSE65664.GATA3.Kelly 195 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 185 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 252 bp overlap
ChIP DE DE-GATA4-2 252 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 252 bp overlap
ChIP DE DE-GATA6-2 252 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 252 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 252 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 252 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 252 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 248 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 252 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 252 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 140 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 252 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 252 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 251 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 252 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 139 bp overlap
ChIP K562 ENCFF738SPU 221 bp overlap
ChIP K562 ENCFF744ALD 252 bp overlap
HNF1B 1 dataset
ChIP HepG2 ENCFF928THX 168 bp overlap
HNF4A 5 datasets
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 111 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 105 bp overlap
ChIP Hep-G2 ENCSR000EEU.HNF4A.Hep-G2 82 bp overlap
ChIP HepG2 ENCFF146SSF 141 bp overlap
ChIP HepG2 ENCFF669NAM 113 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 156 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 182 bp overlap
JUND 1 dataset
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 76 bp overlap
KDM1A 5 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 234 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 240 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 221 bp overlap
ChIP K562 ENCFF128TYE 252 bp overlap
ChIP K562 ENCFF133OLU 252 bp overlap
KDM6A 1 dataset
ChIP HepG2 ENCFF135ECT 209 bp overlap
KLF16 1 dataset
ChIP K-562 ENCSR760UVO.KLF16.K-562 184 bp overlap
LCOR 1 dataset
ChIP HepG2 ENCFF499KCU 137 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 252 bp overlap
MAX 5 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 92 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 61 bp overlap
ChIP HepG2 ENCFF507HCX 252 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 123 bp overlap
ChIP K562 ENCFF524IJO 252 bp overlap
MAZ 1 dataset
ChIP Hep-G2 ENCSR000EDN.MAZ.Hep-G2 106 bp overlap
MED1 3 datasets
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 95 bp overlap
ChIP HepG2 ENCFF495TSS 192 bp overlap
ChIP OCI-Ly1 GSE53601.MED1.OCI-Ly1 252 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 101 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 252 bp overlap
ChIP K562 ENCFF320GSD 243 bp overlap
MLX 2 datasets
ChIP Hep-G2 ENCSR125DAD.MLX.Hep-G2 72 bp overlap
ChIP HepG2 ENCFF652PXN 200 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR113LAS.MTA2.K-562 252 bp overlap
ChIP K562 ENCFF880VZB 226 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 203 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 234 bp overlap
ChIP Kelly GSE80151.MYCN.Kelly 204 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 252 bp overlap
NCOR1 5 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 252 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 252 bp overlap
ChIP K562 ENCFF788MPU 180 bp overlap
ChIP K562 ENCFF866HRM 252 bp overlap
ChIP OCI-Ly1 GSE29282.NCOR1.OCI-Ly1 161 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 237 bp overlap
ChIP K562 ENCFF167YID 178 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 111 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 252 bp overlap
ChIP K562 ENCFF004YPK 104 bp overlap
NR4A1 2 datasets
ChIP K-562 ENCSR692RET.NR4A1.K-562 173 bp overlap
ChIP K562 ENCFF679FCN 237 bp overlap
NR5A1 2 datasets
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 90 bp overlap
ChIP HepG2 ENCFF970YZO 137 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 161 bp overlap
ChIP HepG2 ENCFF526NOJ 252 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 252 bp overlap
ChIP K562 ENCFF286KMN 179 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 203 bp overlap
ChIP K562 ENCFF236IUS 252 bp overlap
PML 2 datasets
ChIP K-562 ENCSR000BQY.PML.K-562 236 bp overlap
ChIP K562 ENCFF801LKH 157 bp overlap
POLR2A 3 datasets
ChIP K562 ENCFF262YXJ 198 bp overlap
ChIP K562 ENCFF419GHN 252 bp overlap
ChIP K562 ENCFF514URW 196 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 252 bp overlap
POU2F2 2 datasets
ChIP BJAB_BIRA GSE79480.POU2F2.BJAB_BIRA 65 bp overlap
ChIP BJAB_BIRA_T223A GSE79480.POU2F2.BJAB_BIRA_T223A 55 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 185 bp overlap
RAD21 1 dataset
ChIP IMR-5 GSE78957.RAD21.IMR-5 116 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 122 bp overlap
RELA 2 datasets
ChIP BJAB GSE117250.RELA.BJAB 92 bp overlap
ChIP BJAB_1h-activation GSE117250.RELA.BJAB_1h-activation 64 bp overlap
REST 3 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 195 bp overlap
ChIP K562 ENCFF430APM 225 bp overlap
ChIP K562 ENCFF688UKW 252 bp overlap
RREB1 1 dataset
ChIP HepG2 ENCFF986CSN 178 bp overlap
RXRB 1 dataset
ChIP HepG2 ENCFF539ZAY 222 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 252 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 217 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 223 bp overlap
SKI 2 datasets
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 152 bp overlap
ChIP HepG2 ENCFF631IPX 227 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 252 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 222 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 252 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 218 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 252 bp overlap
SMAD4 2 datasets
ChIP HepG2 ENCFF615GTE 161 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 152 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 229 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 252 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 252 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 151 bp overlap
ChIP K562 ENCFF506JCB 252 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 168 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 139 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 203 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 62 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR000BJX.SP1.Hep-G2 124 bp overlap
SRF 2 datasets
ChIP GM12878 ENCFF878IIX 79 bp overlap
ChIP K562 ENCFF766EOO 67 bp overlap
STAT5A 2 datasets
ChIP K-562 ENCSR000BRR.STAT5A.K-562 252 bp overlap
ChIP K562 ENCFF226BTJ 167 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 150 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 239 bp overlap
TAF1 1 dataset
ChIP K-562 ENCSR000BKS.TAF1.K-562 161 bp overlap
TAL1 11 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 252 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 252 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 252 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 205 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 252 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 252 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 252 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 252 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 242 bp overlap
ChIP K562 ENCFF620GMX 250 bp overlap
ChIP K562 ENCFF661CCK 191 bp overlap
TCF12 4 datasets
ChIP Hep-G2 ENCSR000BJG.TCF12.Hep-G2 63 bp overlap
ChIP K-562 ENCSR744WOO.TCF12.K-562 252 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 227 bp overlap
ChIP K562 ENCFF931DJY 242 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 252 bp overlap
ChIP K562 ENCFF319QZT 220 bp overlap
TEAD1 1 dataset
ChIP HepG2 ENCFF661PNM 143 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 132 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 213 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 55 bp overlap
TRIM24 4 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 252 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 249 bp overlap
ChIP K562 ENCFF284DKY 252 bp overlap
ChIP K562 ENCFF616RIL 252 bp overlap
TRIM28 2 datasets
ChIP K-562 ENCSR000BRW.TRIM28.K-562 196 bp overlap
ChIP K562 ENCFF172UPN 252 bp overlap
USF2 1 dataset
ChIP HepG2 ENCFF433IUE 216 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 143 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 209 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 181 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 174 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 243 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 252 bp overlap
ChIP K562 ENCFF281INV 252 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 165 bp overlap