chr12 : 31,723,549 – 31,723,765
216 bp 113 TFs 3 linked genes
This 216 bp open chromatin element is linked to AMN1, ENSG00000276900, and STMN1P1 and is bound by 113 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
AMN1 5.3 kb Proximal Proximity
ENSG00000276900 5.3 kb Proximal Proximity
STMN1P1 7.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:31,718,549 – 31,728,765
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 216 bp overlap
ChIP K562 ENCFF938UXQ 216 bp overlap
ARNT 2 datasets
ChIP K562 ENCFF291CXK 216 bp overlap
ChIP K562 ENCFF291CXK 191 bp overlap
ATF1 2 datasets
ChIP K-562 ENCSR091GVJ.ATF1.K-562 174 bp overlap
ChIP K562 ENCFF817JQF 216 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 216 bp overlap
ChIP K562 ENCFF604FPV 216 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 191 bp overlap
ATF7 1 dataset
ChIP K562 ENCFF308SKS 216 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 182 bp overlap
BCOR 1 dataset
ChIP K562 ENCFF343XWA 216 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 187 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 216 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 173 bp overlap
BRD4 7 datasets
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 216 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 216 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 216 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 135 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 94 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 167 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 169 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 216 bp overlap
ChIP K562 ENCFF963TXY 216 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 216 bp overlap
ChIP K562 ENCFF673OEZ 216 bp overlap
CEBPB 6 datasets
ChIP K-562 ENCSR000EHE.CEBPB.K-562 216 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 216 bp overlap
ChIP K562 ENCFF189VBN 180 bp overlap
ChIP K562 ENCFF194QGF 183 bp overlap
ChIP K562 ENCFF584CTB 216 bp overlap
ChIP K562 ENCFF584CTB 216 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 163 bp overlap
CEBPG 2 datasets
ChIP K562 ENCFF651CMK 216 bp overlap
ChIP K562 ENCFF956TPS 216 bp overlap
CREB3 1 dataset
ChIP K-562 ENCSR093FKD.CREB3.K-562 209 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 216 bp overlap
ChIP K562 ENCFF403WPG 216 bp overlap
CTCF 2 datasets
ChIP Kasumi-1_siRE GSE121280.CTCF.Kasumi-1_siRE 113 bp overlap
ChIP sigmoid colon ENCFF848HFJ 180 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 216 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 195 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 189 bp overlap
DPF2 4 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 216 bp overlap
ChIP K562 ENCFF739JDE 216 bp overlap
ChIP K562 ENCFF775HUO 216 bp overlap
ChIP K562 ENCFF775HUO 216 bp overlap
E2F5 2 datasets
ChIP K562 ENCFF688PUB 216 bp overlap
ChIP K562 ENCFF688PUB 216 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 204 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 196 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 216 bp overlap
ChIP K562 ENCFF622HMZ 129 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 187 bp overlap
ChIP K562 ENCFF053BWO 216 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 178 bp overlap
ERF 2 datasets
ChIP K562 ENCFF626IQJ 216 bp overlap
ChIP K562 ENCFF626IQJ 117 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 92 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 116 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 73 bp overlap
ChIP K562 ENCFF455MKD 216 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 190 bp overlap
ChIP DE DE-FOXA2-2 216 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 211 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 185 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 173 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 207 bp overlap
ChIP K562 ENCFF544PCK 159 bp overlap
ChIP K562 ENCFF830LLA 216 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 62 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 216 bp overlap
ChIP DE DE-GATA4-2 216 bp overlap
ChIP foregut GSE117136.GATA4.foregut 150 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 216 bp overlap
GATA6 10 datasets
ChIP AGS GSE51936.GATA6.AGS 58 bp overlap
ChIP DE DE-GATA6-1 216 bp overlap
ChIP DE DE-GATA6-2 216 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 216 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 216 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 184 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 216 bp overlap
ChIP foregut GSE117136.GATA6.foregut 203 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 216 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 72 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 72 bp overlap
ChIP K562 ENCFF928TKZ 216 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 216 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 129 bp overlap
ChIP K562 ENCFF744ALD 102 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 216 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 202 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 216 bp overlap
ChIP K562 ENCFF055GAZ 74 bp overlap
ChIP K562 ENCFF317JJX 72 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 216 bp overlap
IRF1 1 dataset
ChIP K562 ENCFF277KTJ 216 bp overlap
IRF9 2 datasets
ChIP K-562 ENCSR926KTP.IRF9.K-562 216 bp overlap
ChIP K562 ENCFF346PQL 216 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 216 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCFF667EJQ 216 bp overlap
L3MBTL2 3 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 216 bp overlap
ChIP K562 ENCFF320EQC 216 bp overlap
ChIP K562 ENCFF320EQC 101 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 183 bp overlap
MAX 2 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 179 bp overlap
ChIP K562 ENCFF524IJO 216 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 162 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 196 bp overlap
MGA 1 dataset
ChIP K-562 ENCSR710WLO.MGA.K-562 216 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 186 bp overlap
ChIP K562 ENCFF731XJJ 123 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 106 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 216 bp overlap
MTA2 1 dataset
ChIP K562 ENCFF441KCP 216 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 97 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000FAG.MYC.K-562 109 bp overlap
NBN 4 datasets
ChIP GM12878 ENCFF213ZNN 83 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 114 bp overlap
ChIP K-562 ENCSR085QEV.NBN.K-562 173 bp overlap
ChIP K562 ENCFF146YTY 216 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 216 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 202 bp overlap
ChIP K562 ENCFF788MPU 216 bp overlap
ChIP K562 ENCFF866HRM 216 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 216 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 187 bp overlap
ChIP K562 ENCFF167YID 216 bp overlap
NFRKB 3 datasets
ChIP K-562 ENCSR657EOF.NFRKB.K-562 153 bp overlap
ChIP K562 ENCFF057YFW 216 bp overlap
ChIP K562 ENCFF057YFW 167 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF568JLK 216 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 75 bp overlap
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 149 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 164 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF674RQA 92 bp overlap
NR4A1 1 dataset
ChIP K-562 ENCSR000DJW.NR4A1.K-562 101 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF514URW 216 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 216 bp overlap
RELA 1 dataset
ChIP K-562 ENCSR772EEN.RELA.K-562 216 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 216 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 111 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 216 bp overlap
SHOX2 1 dataset
ChIP K-562 ENCSR184IQF.SHOX2.K-562 103 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 59 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 187 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 216 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 216 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 216 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 216 bp overlap
SMARCA4 5 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 216 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 216 bp overlap
ChIP K562 ENCFF316MCJ 216 bp overlap
ChIP K562 ENCFF316MCJ 216 bp overlap
ChIP K562 ENCFF506JCB 132 bp overlap
SMARCA5 2 datasets
ChIP GM12878 ENCFF327LDR 151 bp overlap
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 163 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 214 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 216 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 216 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 216 bp overlap
ChIP K562 ENCFF059YCJ 216 bp overlap
STAT3 1 dataset
ChIP Th1_IL-6_Mut3 GSE130810.STAT3.Th1_IL-6_Mut3 92 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 214 bp overlap
TAL1 10 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 216 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 216 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 211 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 172 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 215 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 182 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 203 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 185 bp overlap
ChIP K562 ENCFF620GMX 162 bp overlap
ChIP K562 ENCFF661CCK 216 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 216 bp overlap
TBP 2 datasets
ChIP K-562 ENCSR000EHA.TBP.K-562 144 bp overlap
ChIP K562 ENCFF901UYM 216 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCFF951HUW 216 bp overlap
TCF12 3 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 216 bp overlap
ChIP K562 ENCFF909RDY 216 bp overlap
ChIP K562 ENCFF931DJY 216 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 216 bp overlap
ChIP K562 ENCFF319QZT 97 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 216 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 216 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 184 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 186 bp overlap
TRIM24 4 datasets
ChIP K-562 ENCSR957LDM.TRIM24.K-562 173 bp overlap
ChIP K-562 ENCSR907MZR.TRIM24.K-562 204 bp overlap
ChIP K562 ENCFF284DKY 216 bp overlap
ChIP K562 ENCFF616RIL 216 bp overlap
TRIM28 2 datasets
ChIP K562 ENCFF429WPG 216 bp overlap
ChIP K562 ENCFF429WPG 195 bp overlap
YY1 3 datasets
ChIP GM12878 ENCFF908JTL 216 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 204 bp overlap
ChIP K562 ENCFF660QRE 91 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 216 bp overlap
ZBTB2 2 datasets
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 171 bp overlap
ChIP K562 ENCFF290ESQ 216 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 144 bp overlap
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 216 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 167 bp overlap
ZEB2 3 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 216 bp overlap
ChIP K562 ENCFF795CMH 216 bp overlap
ChIP K562 ENCFF975RXS 164 bp overlap
ZNF207 1 dataset
ChIP GM12878 ENCSR117KWH.ZNF207.GM12878 210 bp overlap
ZNF24 3 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 199 bp overlap
ChIP K-562 ENCSR117WTM.ZNF24.K-562 216 bp overlap
ChIP K562 ENCFF877JCX 216 bp overlap
ZNF257 1 dataset
ChIP K-562 ENCSR492FKD.ZNF257.K-562 155 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 216 bp overlap
ZNF41 1 dataset
ChIP K-562 ENCSR235PYI.ZNF41.K-562 146 bp overlap
ZNF583 1 dataset
ChIP K-562 ENCSR775EQV.ZNF583.K-562 161 bp overlap
ZNF592 3 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 216 bp overlap
ChIP K562 ENCFF547OSS 216 bp overlap
ChIP K562 ENCFF547OSS 216 bp overlap
ZNF644 1 dataset
ChIP K562 ENCFF290PDB 216 bp overlap
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