chr7 : 27,108,344 – 27,108,900
556 bp 125 TFs 2 linked genes
This 556 bp open chromatin element is linked to HOXA3 and HOXA-AS2 and is bound by 125 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HOXA3 4.9 kb Proximal Proximity
HOXA-AS2 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:27,103,344 – 27,113,900
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 149 bp overlap
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 347 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 264 bp overlap
AGO2 4 datasets
ChIP HepG2 ENCFF252VFI 69 bp overlap
ChIP HepG2 ENCFF252VFI 556 bp overlap
ChIP HepG2 ENCFF773YDL 71 bp overlap
ChIP HepG2 ENCFF773YDL 556 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 556 bp overlap
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 381 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 407 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 556 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 556 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 556 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 556 bp overlap
BRD3 2 datasets
ChIP LPS141 GSE111253.BRD3.LPS141 123 bp overlap
ChIP LPS141 GSE111253.BRD3.LPS141 183 bp overlap
BRD4 8 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 328 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 556 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 201 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 534 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 343 bp overlap
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 90 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 64 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 290 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 272 bp overlap
ChIP H1 ENCFF095JHA 62 bp overlap
CHD1 2 datasets
ChIP IMR-90 ENCSR000EFC.CHD1.IMR-90 297 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 207 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 125 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 459 bp overlap
CTCF 61 datasets
ChIP Peyer's patch ENCFF701KWW 351 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 190 bp overlap
ChIP adrenal gland ENCFF678WUB 311 bp overlap
ChIP adrenal gland ENCFF886WNR 501 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 397 bp overlap
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 250 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 445 bp overlap
ChIP breast_epithelium ENCSR697YIN.CTCF.breast_epithelium 352 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 379 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 350 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 354 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 261 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 197 bp overlap
ChIP esophagus muscularis mucosa ENCFF421MEH 421 bp overlap
ChIP esophagus muscularis mucosa ENCFF421MEH 234 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 205 bp overlap
ChIP esophagus muscularis mucosa ENCFF544GAS 295 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 397 bp overlap
ChIP esophagus squamous epithelium ENCFF683HYK 351 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 355 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 426 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR074SFL.CTCF.esophagus_muscularis-mucosa 207 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR353DFU.CTCF.esophagus_muscularis-mucosa 201 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 277 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 256 bp overlap
ChIP gastrocnemius-medialis ENCSR594NSU.CTCF.gastrocnemius-medialis 207 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 421 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 345 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 345 bp overlap
ChIP gastroesophageal sphincter ENCFF582GAX 341 bp overlap
ChIP gastroesophageal sphincter ENCFF918KPI 168 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 434 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 397 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 366 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 264 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 358 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 471 bp overlap
ChIP lower lobe of left lung ENCFF150FXW 439 bp overlap
ChIP lower lobe of left lung ENCFF906NCV 437 bp overlap
ChIP lower lobe of right lung ENCFF092XHT 424 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 305 bp overlap
ChIP lung_left_upper-lobe ENCSR970UZD.CTCF.lung_left_upper-lobe 265 bp overlap
ChIP lung_left_upper-lobe ENCSR027FSZ.CTCF.lung_left_upper-lobe 313 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 265 bp overlap
ChIP right atrium auricular region ENCFF690LBT 297 bp overlap
ChIP spleen ENCFF065CBS 472 bp overlap
ChIP spleen ENCFF077XIZ 387 bp overlap
ChIP spleen ENCFF326DUY 470 bp overlap
ChIP spleen ENCSR482PMN.CTCF.spleen 310 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 296 bp overlap
ChIP thoracic aorta ENCFF012WJQ 437 bp overlap
ChIP thoracic aorta ENCFF166PKA 461 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 263 bp overlap
ChIP transverse colon ENCFF077CMZ 366 bp overlap
ChIP transverse colon ENCFF749DPF 481 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 491 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 431 bp overlap
ChIP upper lobe of left lung ENCFF645BXH 431 bp overlap
ChIP upper lobe of left lung ENCFF962AIJ 425 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 365 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 157 bp overlap
CTCFL 2 datasets
ChIP FT282 GSE131931.CTCFL.FT282 355 bp overlap
ChIP K-562 GSE70764.CTCFL.K-562 159 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 168 bp overlap
EP300 2 datasets
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 490 bp overlap
ChIP tibial nerve ENCFF346AYA 253 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 236 bp overlap
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 296 bp overlap
ESR1 1 dataset
ChIP Ishikawa GSE99905.ESR1.Ishikawa 228 bp overlap
ETS1 5 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 164 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 177 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 164 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 132 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 342 bp overlap
ETV1 1 dataset
ChIP GIST GSE22441.ETV1.GIST 193 bp overlap
ETV5::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
EZH2 11 datasets
ChIP A673 ENCFF955JRZ 361 bp overlap
ChIP GM23338 ENCFF613YON 556 bp overlap
ChIP GM23338 ENCFF886DXX 266 bp overlap
ChIP H1 ENCFF232NZA 556 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 496 bp overlap
ChIP hepatocyte ENCFF118DKH 83 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 497 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 556 bp overlap
ChIP neural progenitor cell ENCFF472NFV 556 bp overlap
ChIP neural progenitor cell ENCFF472NFV 556 bp overlap
Erg 3 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
FOS 2 datasets
ChIP endothelial cell of umbilical vein ENCFF415XBG 67 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 74 bp overlap
FOSL2 1 dataset
ChIP LPS141 GSE111253.FOSL2.LPS141 50 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 174 bp overlap
GABPA 4 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif DE_24h DE_24h-GABPA_MA0062.4 10 bp overlap
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
ChIP H1 ENCFF739QFD 341 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
GLIS2 1 dataset
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 59 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 297 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 169 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 256 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 237 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 306 bp overlap
HNRNPLL 1 dataset
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 242 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 158 bp overlap
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 303 bp overlap
IKZF2 3 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 556 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 473 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 270 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 129 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 416 bp overlap
JUND 1 dataset
ChIP GP5D GSE51234.JUND.GP5D 556 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 76 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 222 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MAZ 2 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 188 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 307 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 56 bp overlap
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 458 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 357 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 246 bp overlap
NCAPH2 3 datasets
ChIP HEK293 GSE97540.NCAPH2.HEK293 417 bp overlap
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 480 bp overlap
ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 345 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 176 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 189 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 260 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 193 bp overlap
NR2F2 3 datasets
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 343 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 172 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 134 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 251 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 556 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 425 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 445 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 452 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 268 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
POLR2A 65 datasets
ChIP IMR-90 ENCFF672YWV 115 bp overlap
ChIP Peyer's patch ENCFF767HVN 406 bp overlap
ChIP adrenal gland ENCFF843OBJ 314 bp overlap
ChIP body of pancreas ENCFF501FEC 276 bp overlap
ChIP body of pancreas ENCFF675RCN 556 bp overlap
ChIP body of pancreas ENCFF727UBE 412 bp overlap
ChIP breast epithelium ENCFF045XXN 279 bp overlap
ChIP breast epithelium ENCFF065JSZ 405 bp overlap
ChIP breast epithelium ENCFF110TAD 345 bp overlap
ChIP breast epithelium ENCFF955FMX 433 bp overlap
ChIP breast epithelium ENCFF960NNA 431 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 443 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 524 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 319 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 112 bp overlap
ChIP esophagus muscularis mucosa ENCFF432ZCY 446 bp overlap
ChIP esophagus muscularis mucosa ENCFF617PTB 301 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 366 bp overlap
ChIP esophagus squamous epithelium ENCFF297FPP 391 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 366 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 209 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 297 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 451 bp overlap
ChIP gastroesophageal sphincter ENCFF043KAM 333 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 332 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 474 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 474 bp overlap
ChIP gastroesophageal sphincter ENCFF461UHJ 286 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 199 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 208 bp overlap
ChIP heart left ventricle ENCFF591JWH 251 bp overlap
ChIP heart left ventricle ENCFF591JWH 247 bp overlap
ChIP right lobe of liver ENCFF026NCK 499 bp overlap
ChIP sigmoid colon ENCFF101ILL 157 bp overlap
ChIP sigmoid colon ENCFF543ARF 361 bp overlap
ChIP sigmoid colon ENCFF653CQA 175 bp overlap
ChIP sigmoid colon ENCFF661AMI 357 bp overlap
ChIP sigmoid colon ENCFF661AMI 244 bp overlap
ChIP sigmoid colon ENCFF725QFT 339 bp overlap
ChIP sigmoid colon ENCFF748YVT 362 bp overlap
ChIP sigmoid colon ENCFF754JQR 247 bp overlap
ChIP spleen ENCFF044PYR 448 bp overlap
ChIP spleen ENCFF446ZGT 556 bp overlap
ChIP spleen ENCFF706IUS 535 bp overlap
ChIP spleen ENCFF955VIQ 291 bp overlap
ChIP stomach ENCFF278MYS 241 bp overlap
ChIP stomach ENCFF607ZPU 187 bp overlap
ChIP stomach ENCFF820WZN 191 bp overlap
ChIP thyroid gland ENCFF979LRR 271 bp overlap
ChIP tibial nerve ENCFF983HAU 462 bp overlap
ChIP tibial nerve ENCFF983HAU 250 bp overlap
ChIP transverse colon ENCFF193UMS 307 bp overlap
ChIP transverse colon ENCFF607LKE 256 bp overlap
ChIP transverse colon ENCFF610RWV 265 bp overlap
ChIP transverse colon ENCFF840PXT 156 bp overlap
ChIP upper lobe of left lung ENCFF095BJW 371 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 314 bp overlap
ChIP upper lobe of left lung ENCFF504HCM 434 bp overlap
ChIP upper lobe of left lung ENCFF603FIH 405 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 315 bp overlap
ChIP uterus ENCFF208ADI 461 bp overlap
ChIP uterus ENCFF566ZPY 325 bp overlap
ChIP uterus ENCFF566ZPY 135 bp overlap
ChIP vagina ENCFF305NWS 437 bp overlap
ChIP vagina ENCFF384GAB 321 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 482 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 443 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 121 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 363 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 516 bp overlap
PRDM9 3 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 251 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 352 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 341 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 341 bp overlap
RELA 7 datasets
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 169 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 198 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 86 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 105 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 257 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 211 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 434 bp overlap
RNF2 5 datasets
ChIP H1 ENCFF239FFS 556 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.RNF2.HEK293T_PCGF135fl 206 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 310 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 110 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 289 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 556 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 556 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 56 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 213 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 290 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 556 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 382 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 231 bp overlap
SMARCA4 4 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 304 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 350 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 68 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 323 bp overlap
SMARCC1 5 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 301 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 73 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 183 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 272 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 465 bp overlap
SMC1 1 dataset
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 173 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 489 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SPIB 3 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 556 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 556 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 185 bp overlap
STAT3 1 dataset
ChIP FaDu_BB608 GSE78212.STAT3.FaDu_BB608 163 bp overlap
SUPT16H 1 dataset
ChIP hiF-T GSE98758.SUPT16H.hiF-T 136 bp overlap
SUZ12 7 datasets
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 556 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 513 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 408 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 415 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 534 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 511 bp overlap
Spi1 3 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 144 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 123 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 277 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 54 bp overlap
TRIM25 2 datasets
ChIP BT-549 GSE79588.TRIM25.BT-549 59 bp overlap
ChIP BT-549 GSE79588.TRIM25.BT-549 329 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 319 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 513 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 278 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 54 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF257 4 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif DE_24h DE_24h-ZNF257_MA1710.2 10 bp overlap
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
ZNF506 1 dataset
ChIP HEK293T GSE78099.ZNF506.HEK293T 170 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 89 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF768 4 datasets
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif DE_24h DE_24h-ZNF768_MA1731.2 9 bp overlap
Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap
Huangfu Lab · Publications · Resources · Contact