chr1:150,634,804–150,635,486

chr1 : 150,634,804 – 150,635,486

682 bp 113 TFs 9 linked genes

This 682 bp open chromatin element is linked to 9 target genes and is bound by 113 transcription factors.

Linked Genes

9 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000288880		5.0 kb	Proximal	Proximity
ENSA		5.7 kb	Proximal	Proximity
MCL1		55.6 kb	Distal	Multiome
GOLPH3L		61.9 kb	Distal	Multiome
TARS2		147.8 kb	Distal	Multiome
CTSK		173.0 kb	Distal	Multiome+HiCAR
ARNT		241.4 kb	Distal	Multiome
RPRD2		271.1 kb	Distal	Multiome
SETDB1		291.1 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

113 transcription factors

ARID1B 1 dataset

ChIP K562 ENCFF938UXQ 424 bp overlap

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 678 bp overlap

ChIP H1 ENCFF399KAM 409 bp overlap

ChIP K562 ENCFF817JQF 504 bp overlap

ChIP K562 ENCFF030XBX 283 bp overlap

ChIP K562 ENCFF308SKS 548 bp overlap

CAVIN1 1 dataset

ChIP K562 ENCFF731YBD 316 bp overlap

CBFA2T2 2 datasets

ChIP K562 ENCFF963TXY 111 bp overlap

ChIP K562 ENCFF963TXY 164 bp overlap

CBFA2T3 2 datasets

ChIP K562 ENCFF673OEZ 320 bp overlap

ChIP K562 ENCFF673OEZ 270 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCFF432ZEW 305 bp overlap

CREB3 1 dataset

ChIP K562 ENCFF985QJI 417 bp overlap

CTBP1 1 dataset

ChIP K562 ENCFF403WPG 237 bp overlap

CXXC5 2 datasets

ChIP K562 ENCFF497CZN 516 bp overlap

ChIP K562 ENCFF497CZN 161 bp overlap

DDX20 1 dataset

ChIP K562 ENCFF373BEC 361 bp overlap

DMBX1 1 dataset

ChIP K562 ENCFF972HXB 335 bp overlap

ChIP K562 ENCFF775HUO 577 bp overlap

E2F5 2 datasets

ChIP K562 ENCFF688PUB 413 bp overlap

ChIP K562 ENCFF688PUB 646 bp overlap

EP400 1 dataset

ChIP K562 ENCFF850OZQ 639 bp overlap

ChIP K562 ENCFF626IQJ 337 bp overlap

ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 176 bp overlap

ChIP WTC11 ENCFF011YUL 281 bp overlap

ChIP WTC11 ENCFF812SCD 437 bp overlap

EZH2 2 datasets

ChIP neural progenitor cell ENCFF018MKA 682 bp overlap

ChIP neural progenitor cell ENCFF472NFV 644 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 634 bp overlap

ChIP DE DE-FOXA2-2 571 bp overlap

GATA2 1 dataset

ChIP K562 ENCFF088XQT 289 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 559 bp overlap

ChIP DE DE-GATA4-2 626 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 529 bp overlap

ChIP DE DE-GATA6-2 661 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 638 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 553 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 568 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 346 bp overlap

GTF2A2 1 dataset

ChIP K562 ENCFF041WRN 458 bp overlap

ChIP K562 ENCFF882TEV 288 bp overlap

HDAC1 2 datasets

ChIP K562 ENCFF968WBH 521 bp overlap

ChIP K562 ENCFF968WBH 348 bp overlap

HDAC2 1 dataset

ChIP K562 ENCFF744ALD 421 bp overlap

HDAC3 2 datasets

ChIP K562 ENCFF713GIR 265 bp overlap

ChIP K562 ENCFF713GIR 471 bp overlap

HDAC8 1 dataset

ChIP K562 ENCFF784HCJ 366 bp overlap

HMBOX1 2 datasets

ChIP K562 ENCFF055GAZ 531 bp overlap

ChIP K562 ENCFF317JJX 521 bp overlap

ChIP K562 ENCFF170RNI 423 bp overlap

IKZF1 1 dataset

ChIP K562 ENCFF348IBL 263 bp overlap

ChIP K562 ENCFF055LPP 297 bp overlap

ChIP K562 ENCFF346PQL 303 bp overlap

ChIP DE_D1 S08-DE-d1-JUN-exp1 400 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 553 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 400 bp overlap

KDM1A 2 datasets

ChIP K562 ENCFF128TYE 192 bp overlap

ChIP K562 ENCFF133OLU 461 bp overlap

ChIP K562 ENCFF948QSP 291 bp overlap

L3MBTL2 1 dataset

ChIP K562 ENCFF320EQC 160 bp overlap

ChIP K562 ENCFF340MHH 87 bp overlap

LMO2 2 datasets

ChIP Kasumi-1 GSE43834.LMO2.Kasumi-1 143 bp overlap

ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 176 bp overlap

ChIP H1 ENCFF601FOM 300 bp overlap

ChIP H1 ENCFF914VQY 357 bp overlap

ChIP K562 ENCFF398VJM 537 bp overlap

ChIP K562 ENCFF524IJO 397 bp overlap

ChIP WTC11 ENCFF223QFY 585 bp overlap

ChIP K562 ENCFF741LIL 185 bp overlap

MECOM 1 dataset

ChIP K562 ENCFF773RGL 264 bp overlap

MEF2D 2 datasets

ChIP K562 ENCFF392LDT 363 bp overlap

ChIP K562 ENCFF392LDT 421 bp overlap

ChIP K562 ENCFF140CEX 560 bp overlap

ChIP K562 ENCFF342DNS 196 bp overlap

ChIP K562 ENCFF450LDL 531 bp overlap

ChIP K562 ENCFF820IGH 453 bp overlap

ChIP K562 ENCFF820IGH 455 bp overlap

NANOG 3 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 122 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 198 bp overlap

NCOR1 2 datasets

ChIP K562 ENCFF788MPU 421 bp overlap

ChIP K562 ENCFF866HRM 445 bp overlap

ChIP K562 ENCFF047YKA 405 bp overlap

NFRKB 1 dataset

ChIP K562 ENCFF057YFW 570 bp overlap

NR2C1 1 dataset

ChIP K562 ENCFF568JLK 370 bp overlap

NR2F1 1 dataset

ChIP K562 ENCFF221HJH 300 bp overlap

NR4A1 1 dataset

ChIP K562 ENCFF998LHF 458 bp overlap

ChIP WTC11 ENCFF634NAO 123 bp overlap

ChIP K562 ENCFF286KMN 391 bp overlap

POLR2A 1 dataset

ChIP HL-60 ENCFF321XKE 424 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 522 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 473 bp overlap

PRRX2 1 dataset

ChIP WTC11 ENCFF107JGJ 301 bp overlap

PTTG1 1 dataset

ChIP K562 ENCFF017KRM 357 bp overlap

RAD21 1 dataset

ChIP K562 ENCFF634XYR 216 bp overlap

RAD51 1 dataset

ChIP K562 ENCFF133ELP 405 bp overlap

ChIP K562 ENCFF892SPR 438 bp overlap

RNF2 2 datasets

ChIP K562 ENCFF653BQJ 611 bp overlap

ChIP K562 ENCFF653BQJ 366 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 309 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 406 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 507 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 532 bp overlap

SMAD3 1 dataset

ChIP K562 ENCFF885DQE 265 bp overlap

SMAD4 2 datasets

ChIP K562 ENCFF628RBP 443 bp overlap

ChIP K562 ENCFF628RBP 541 bp overlap

SMARCA4 1 dataset

ChIP K562 ENCFF316MCJ 485 bp overlap

SOX13 1 dataset

ChIP HepG2 ENCFF062VSQ 357 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 362 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 580 bp overlap

ChIP K562 ENCFF059YCJ 261 bp overlap

ChIP HL-60 ENCFF645GBT 191 bp overlap

ChIP K562 ENCFF620GMX 306 bp overlap

TBX18 1 dataset

ChIP K562 ENCFF473CJK 351 bp overlap

TCF12 1 dataset

ChIP K562 ENCFF931DJY 217 bp overlap

TCF15 1 dataset

ChIP K562 ENCFF099NVR 296 bp overlap

TCF3 3 datasets

ChIP K562 ENCFF319QZT 381 bp overlap

ChIP K562 ENCFF319QZT 252 bp overlap

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 293 bp overlap

TCFL5 1 dataset

ChIP K562 ENCFF187XYP 261 bp overlap

ChIP K562 ENCFF620NFN 283 bp overlap

TRERF1 1 dataset

ChIP WTC11 ENCFF113BUM 245 bp overlap

TSHZ1 1 dataset

ChIP K562 ENCFF289XHG 277 bp overlap

ChIP K562 ENCFF202SFC 425 bp overlap

ChIP WTC11 ENCFF139JAW 417 bp overlap

ChIP HEK293 ENCFF906HIR 239 bp overlap

ZBTB11 1 dataset

ChIP K562 ENCFF215OUF 566 bp overlap

ZBTB12 1 dataset

ChIP K562 ENCFF933CVM 331 bp overlap

ZBTB17 1 dataset

ChIP K562 ENCFF731UTU 369 bp overlap

ZBTB33 1 dataset

ChIP K562 ENCFF427SDV 285 bp overlap

ZBTB9 2 datasets

ChIP K562 ENCFF233EFX 323 bp overlap

ChIP K562 ENCFF233EFX 397 bp overlap

ZNF114 1 dataset

ChIP GM23338 ENCFF631OSW 335 bp overlap

ZNF175 2 datasets

ChIP K562 ENCFF497AEJ 447 bp overlap

ChIP K562 ENCFF497AEJ 654 bp overlap

ZNF215 1 dataset

ChIP K562 ENCFF317MOH 333 bp overlap

ZNF239 1 dataset

ChIP K562 ENCFF703IKI 325 bp overlap

ZNF24 1 dataset

ChIP K562 ENCFF497GLV 388 bp overlap

ZNF257 1 dataset

ChIP K562 ENCFF849YZP 261 bp overlap

ZNF281 1 dataset

ChIP K562 ENCFF594VNM 387 bp overlap

ZNF311 1 dataset

ChIP K562 ENCFF986QSP 309 bp overlap

ZNF347 1 dataset

ChIP K562 ENCFF447FCS 325 bp overlap

ZNF354B 2 datasets

ChIP K562 ENCFF120AXZ 265 bp overlap

ChIP K562 ENCFF955JQT 441 bp overlap

ZNF395 2 datasets

ChIP K562 ENCFF464EIT 525 bp overlap

ChIP K562 ENCFF464EIT 682 bp overlap

ZNF416 1 dataset

ChIP WTC11 ENCFF407TAZ 257 bp overlap

ZNF444 1 dataset

ChIP K562 ENCFF329VCH 315 bp overlap

ZNF583 1 dataset

ChIP K562 ENCFF879KXH 357 bp overlap

ZNF586 1 dataset

ChIP K562 ENCFF278AGJ 285 bp overlap

ZNF592 1 dataset

ChIP K562 ENCFF547OSS 411 bp overlap

ZNF639 2 datasets

ChIP K562 ENCFF271FQR 666 bp overlap

ChIP K562 ENCFF271FQR 441 bp overlap

ZNF740 2 datasets

ChIP K562 ENCFF447IXE 402 bp overlap

ChIP K562 ENCFF447IXE 602 bp overlap

ZNF76 1 dataset

ChIP K562 ENCFF267KQX 361 bp overlap

ZNF766 2 datasets

ChIP K562 ENCFF348LDO 605 bp overlap

ChIP K562 ENCFF348LDO 424 bp overlap

ZSCAN29 1 dataset

ChIP K562 ENCFF797SOU 184 bp overlap