chr1 : 108,962,714 108,962,890
176 bp 115 TFs 2 linked genes
This 176 bp open chromatin element is linked to AKNAD1 and CLCC1 and is bound by 115 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
AKNAD1 593 bp At TSS Proximity
CLCC1 598 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:108,957,714 – 108,967,890
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
115 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP K562 ENCFF751HCS 124 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 58 bp overlap
ASH2L 2 datasets
ChIP GM12878 ENCFF655FLB 176 bp overlap
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 127 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 55 bp overlap
BACH1 1 dataset
ChIP K562 ENCFF990JHI 176 bp overlap
BACH2 2 datasets
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 75 bp overlap
ChIP DOHH2 GSE69558.BACH2.DOHH2 161 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 176 bp overlap
BRD4 8 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 176 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 176 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 176 bp overlap
ChIP K562 ENCFF092PWQ 92 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 61 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 89 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 65 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 69 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 171 bp overlap
ChIP K562 ENCFF118VJV 58 bp overlap
CLOCK 1 dataset
ChIP MCF-7 ENCSR934JDG.CLOCK.MCF-7 176 bp overlap
CTCF 1 dataset
ChIP spleen ENCFF604DQF 176 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 141 bp overlap
ChIP K562 ENCFF739JDE 176 bp overlap
ChIP K562 ENCFF775HUO 176 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCFF692OYJ 60 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 160 bp overlap
E4F1 3 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 176 bp overlap
ChIP K562 ENCFF622HMZ 176 bp overlap
ChIP K562 ENCFF622HMZ 176 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 105 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 176 bp overlap
ELF1 21 datasets
ChIP GM12878 ENCFF432UGA 171 bp overlap
ChIP GM12878 ENCFF692SMY 130 bp overlap
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 176 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 176 bp overlap
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 176 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 176 bp overlap
ChIP HepG2 ENCFF367ZWV 170 bp overlap
ChIP HepG2 ENCFF838BCU 150 bp overlap
ChIP K-562 ENCSR502OEK.ELF1.K-562 176 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 176 bp overlap
ChIP K562 ENCFF245JDF 176 bp overlap
ChIP K562 ENCFF457KVR 176 bp overlap
ChIP K562 ENCFF496AKI 176 bp overlap
ChIP K562 ENCFF886KFV 176 bp overlap
ChIP K562 ENCFF886KFV 176 bp overlap
ChIP MCF-7 ENCFF305BNP 168 bp overlap
ChIP MCF-7 ENCFF366KVK 176 bp overlap
ChIP MCF-7 ENCFF687CWI 176 bp overlap
ChIP MCF-7 ENCSR502NRF.ELF1.MCF-7 176 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 65 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 176 bp overlap
ELF2 1 dataset
ChIP K562 ENCFF787SME 176 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 176 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 176 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 176 bp overlap
ELF4 6 datasets
ChIP HepG2 ENCFF752OAT 79 bp overlap
ChIP HepG2 ENCFF752OAT 176 bp overlap
ChIP HepG2 ENCFF752OAT 176 bp overlap
ChIP K-562 ENCSR638QHV.ELF4.K-562 176 bp overlap
ChIP K562 ENCFF454SBL 176 bp overlap
ChIP K562 ENCFF940SAL 176 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 175 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCFF364ZWT 176 bp overlap
EP400 1 dataset
ChIP K-562 ENCSR817QKV.EP400.K-562 176 bp overlap
ETV1 1 dataset
ChIP K562 ENCFF389WTI 176 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 176 bp overlap
ChIP neural progenitor cell ENCFF472NFV 176 bp overlap
ChIP neural progenitor cell ENCFF472NFV 143 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 165 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 83 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCFF264DJE 176 bp overlap
FOXQ1 1 dataset
ChIP HepG2 ENCFF164USD 107 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF139LXS 176 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 69 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 176 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 119 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 70 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 176 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 63 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 176 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 53 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 95 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 155 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 72 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 176 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 63 bp overlap
KAT7 2 datasets
ChIP K562 ENCFF175ZTN 98 bp overlap
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 176 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 176 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 51 bp overlap
KMT2A 5 datasets
ChIP HEK293T_C-term GSE90762.KMT2A.HEK293T_C-term 176 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 176 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 157 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 176 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 96 bp overlap
MAFF 1 dataset
ChIP K562 ENCFF071YKK 168 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 130 bp overlap
ChIP K562 ENCFF455EEO 176 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 59 bp overlap
MED26 1 dataset
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 176 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 151 bp overlap
MIXL1 1 dataset
ChIP HepG2 ENCFF817YFO 175 bp overlap
MNT 1 dataset
ChIP K-562 ENCSR512NLO.MNT.K-562 123 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 176 bp overlap
MYC 3 datasets
ChIP K562 ENCFF640IEK 157 bp overlap
ChIP MIA-PaCa-2_CM GSE143804.MYC.MIA-PaCa-2_CM 169 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 176 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 176 bp overlap
NCOA1 1 dataset
ChIP K562 ENCFF395XLS 176 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 87 bp overlap
NFATC3 2 datasets
ChIP K562 ENCFF078EKB 176 bp overlap
ChIP K562 ENCFF408QPR 123 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 61 bp overlap
ChIP K562 ENCFF047YKA 176 bp overlap
ChIP K562 ENCFF163BSI 116 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF057YFW 176 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 153 bp overlap
NR2C2 2 datasets
ChIP HepG2 ENCFF944PRH 79 bp overlap
ChIP K562 ENCFF750AXF 81 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 71 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 176 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 176 bp overlap
PAX8 1 dataset
ChIP HepG2 ENCFF844FNE 73 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 51 bp overlap
PHF8 1 dataset
ChIP A-549 ENCSR541AOQ.PHF8.A-549 136 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 127 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 129 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF419GHN 176 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 146 bp overlap
RAD21 1 dataset
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 176 bp overlap
RARG 1 dataset
ChIP HepG2 ENCFF989AQH 98 bp overlap
RBFOX2 4 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 176 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 176 bp overlap
ChIP K562 ENCFF196WTG 176 bp overlap
ChIP K562 ENCFF967GRF 176 bp overlap
REST 1 dataset
ChIP HEK293 ENCSR896UBV.REST.HEK293 71 bp overlap
RLF 1 dataset
ChIP K562 ENCFF998IPA 176 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 176 bp overlap
SIN3A 1 dataset
ChIP A-549 ENCSR513XQX.SIN3A.A-549 155 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 105 bp overlap
SMAD7 1 dataset
ChIP HepG2 ENCFF850FXR 85 bp overlap
SMARCA4 5 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 102 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 176 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 176 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 98 bp overlap
ChIP K562 ENCFF506JCB 91 bp overlap
SMARCE1 3 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 176 bp overlap
ChIP K562 ENCFF690CFF 176 bp overlap
ChIP K562 ENCFF690CFF 176 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 176 bp overlap
SNAI2 3 datasets
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 73 bp overlap
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 102 bp overlap
ChIP keratinocyte_SHCTR GSE55421.SNAI2.keratinocyte_SHCTR 81 bp overlap
SP1 1 dataset
ChIP K562 ENCFF088XXV 131 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 176 bp overlap
TBP 2 datasets
ChIP HeLa-S3 ENCFF715NNJ 132 bp overlap
ChIP K-562 GSE55306.TBP.K-562 153 bp overlap
TCF3 1 dataset
ChIP Ramos GSE139810.TCF3.Ramos 72 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 104 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 176 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 176 bp overlap
ZBTB26 3 datasets
ChIP HEK293 ENCFF752POA 163 bp overlap
ChIP HEK293 ENCFF752TCU 65 bp overlap
ChIP HEK293 ENCSR229DYF.ZBTB26.HEK293 176 bp overlap
ZBTB40 1 dataset
ChIP K562 ENCFF521DSV 64 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCFF148RLQ 176 bp overlap
ZEB2 6 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 97 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 176 bp overlap
ChIP K562 ENCFF795CMH 176 bp overlap
ChIP K562 ENCFF795CMH 176 bp overlap
ChIP K562 ENCFF975RXS 176 bp overlap
ChIP K562 ENCFF975RXS 158 bp overlap
ZFX 6 datasets
ChIP HCT-116 GSE102616.ZFX.HCT-116 176 bp overlap
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 176 bp overlap
ChIP HEK293T ENCFF402JZW 95 bp overlap
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 176 bp overlap
ChIP K562 ENCFF536AJO 56 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 176 bp overlap
ZFY 2 datasets
ChIP HEK293T_22Rv1 GSE145160.ZFY.HEK293T_22Rv1 135 bp overlap
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 176 bp overlap
ZNF121 3 datasets
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 142 bp overlap
ChIP K562 ENCFF314GND 113 bp overlap
ChIP WTC11 ENCFF291API 126 bp overlap
ZNF148 1 dataset
ChIP K562 ENCFF352SDL 176 bp overlap
ZNF197 1 dataset
ChIP K562 ENCFF872BAU 65 bp overlap
ZNF230 1 dataset
ChIP HepG2 ENCFF370ATB 176 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 101 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 176 bp overlap
ZNF33B 1 dataset
ChIP HepG2 ENCFF921KSE 176 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 176 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 124 bp overlap
ZNF384 4 datasets
ChIP HEK293T ENCFF019DZX 169 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 71 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 72 bp overlap
ChIP K562 ENCFF365NXQ 81 bp overlap
ZNF510 1 dataset
ChIP HepG2 ENCFF088QOO 77 bp overlap
ZNF543 1 dataset
ChIP HepG2 ENCFF864SAR 62 bp overlap
ZNF761 1 dataset
ChIP HepG2 ENCFF761IOF 74 bp overlap
ZNF780A 1 dataset
ChIP HepG2 ENCFF394QDQ 166 bp overlap