chr5 : 89,256,163 89,256,390
227 bp 113 TFs 0 linked genes
This 227 bp open chromatin element has no linked target genes and is bound by 113 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:89,251,163 – 89,261,390
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP K-562 ENCSR241LIH.AFF1.K-562 227 bp overlap
ChIP K562 ENCFF096RYC 227 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 2 datasets
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 197 bp overlap
ChIP DOHH2 GSE69558.BACH2.DOHH2 176 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 159 bp overlap
BRD2 7 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 105 bp overlap
ChIP K-562 GSE140325.BRD2.K-562 185 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD2.K-562_dilution-6-100 129 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 187 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 181 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 181 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 89 bp overlap
BRD3 1 dataset
ChIP K-562_dilution-6-100 GSE140325.BRD3.K-562_dilution-6-100 130 bp overlap
BRD4 5 datasets
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 210 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 210 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 227 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 109 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 227 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 204 bp overlap
ChIP K562 ENCFF963TXY 227 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 125 bp overlap
CBX3 1 dataset
ChIP K562 ENCFF410AQU 227 bp overlap
CDK9 3 datasets
ChIP MM1-S_DMSO GSE42355.CDK9.MM1-S_DMSO 225 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 227 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 227 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 227 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 143 bp overlap
DDX21 3 datasets
ChIP A-375 GSE128080.DDX21.A-375 227 bp overlap
ChIP A-375_1726 GSE128080.DDX21.A-375_1726 172 bp overlap
ChIP A-375_1726plus GSE128080.DDX21.A-375_1726plus 216 bp overlap
DPF1 1 dataset
ChIP K-562 GSE97661.DPF1.K-562 204 bp overlap
E2F1 1 dataset
ChIP K-562 ENCSR720HUL.E2F1.K-562 170 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 214 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 200 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 148 bp overlap
ELF4 1 dataset
ChIP K-562 ENCSR638QHV.ELF4.K-562 199 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 227 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 217 bp overlap
ETS1 2 datasets
ChIP 786-O GSE86092.ETS1.786-O 208 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 173 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL2 1 dataset
ChIP LPS141 GSE111253.FOSL2.LPS141 180 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 98 bp overlap
HCFC1 5 datasets
ChIP GM12878 ENCSR514VAY.HCFC1.GM12878 184 bp overlap
ChIP K-562 ENCSR000EFN.HCFC1.K-562 227 bp overlap
ChIP K562 ENCFF959WVM 181 bp overlap
ChIP MCF-7 ENCFF595ZTV 184 bp overlap
ChIP MCF-7 ENCSR697CUP.HCFC1.MCF-7 227 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 120 bp overlap
HDAC2 1 dataset
ChIP K-562 GSE140325.HDAC2.K-562 143 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 74 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 210 bp overlap
ChIP K562 ENCFF348IBL 77 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 227 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 174 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
KLF10 2 datasets
ChIP Hep-G2 GSE97661.KLF10.Hep-G2 156 bp overlap
ChIP MCF-7 GSE97661.KLF10.MCF-7 142 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 220 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 198 bp overlap
MAF 1 dataset
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 86 bp overlap
MAFF 2 datasets
ChIP K-562 ENCSR000EGI.MAFF.K-562 140 bp overlap
ChIP K562 ENCFF071YKK 177 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 227 bp overlap
ChIP K562 ENCFF455EEO 217 bp overlap
MAFK 5 datasets
ChIP A549 ENCFF371EPR 139 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 111 bp overlap
ChIP IMR-90 ENCFF336DHZ 173 bp overlap
ChIP K-562 ENCSR000EGX.MAFK.K-562 134 bp overlap
ChIP K562 ENCFF380WHM 183 bp overlap
MAX 2 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 122 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 214 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 83 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MITF 7 datasets
ChIP 501-mel GSE137522.MITF.501-mel 227 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 227 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 227 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 227 bp overlap
Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 227 bp overlap
ChIP K562 ENCFF731XJJ 227 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 227 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 99 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
NFE2 6 datasets
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
ChIP K-562 ENCSR552YGL.NFE2.K-562 199 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 227 bp overlap
ChIP K-562 ENCSR000FAF.NFE2.K-562 92 bp overlap
ChIP K562 ENCFF047YKA 167 bp overlap
ChIP K562 ENCFF163BSI 124 bp overlap
NFE2L2 2 datasets
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 95 bp overlap
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 159 bp overlap
NFIC 1 dataset
ChIP K-562 ENCSR796ITY.NFIC.K-562 178 bp overlap
NFYA 1 dataset
ChIP K-562 GSE26439.NFYA.K-562 227 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 227 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 193 bp overlap
NR2C1 4 datasets
ChIP K-562 ENCSR742IDN.NR2C1.K-562 227 bp overlap
ChIP K-562 ENCSR178DEG.NR2C1.K-562 227 bp overlap
ChIP K562 ENCFF239KMA 223 bp overlap
ChIP K562 ENCFF568JLK 171 bp overlap
NR2C2 2 datasets
ChIP K-562 ENCSR750LYM.NR2C2.K-562 227 bp overlap
ChIP K562 ENCFF750AXF 227 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 147 bp overlap
PGR 2 datasets
Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap
Motif ES_0h ES_0h-PGR_MA2327.1 9 bp overlap
RAD21 1 dataset
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 204 bp overlap
RAD51 3 datasets
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 227 bp overlap
ChIP K-562 ENCSR524BUE.RAD51.K-562 227 bp overlap
ChIP K562 ENCFF133ELP 225 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
REST 4 datasets
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 69 bp overlap
ChIP K562 ENCFF430APM 115 bp overlap
RUNX1 5 datasets
ChIP 697 GSE138031.RUNX1.697 200 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 212 bp overlap
ChIP MV4-11 GSE79899.RUNX1.MV4-11 209 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 168 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 201 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 216 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 227 bp overlap
SIX5 9 datasets
ChIP A-549 ENCSR000BRL.SIX5.A-549 134 bp overlap
ChIP GM12878 ENCFF766FEJ 213 bp overlap
ChIP GM12878 ENCSR000BJE.SIX5.GM12878 181 bp overlap
ChIP H1 ENCFF942SOJ 176 bp overlap
ChIP K-562 ENCSR000BNW.SIX5.K-562 182 bp overlap
ChIP K-562 ENCSR000BGX.SIX5.K-562 197 bp overlap
ChIP K562 ENCFF472MWE 214 bp overlap
ChIP K562 ENCFF637NIL 217 bp overlap
ChIP WA01 ENCSR000BIQ.SIX5.WA01 154 bp overlap
SMAD3 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 121 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0828.3 10 bp overlap
STAT1 2 datasets
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT3 2 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
SUZ12 2 datasets
ChIP K-562 ENCSR412CTM.SUZ12.K-562 138 bp overlap
ChIP MCF-7 ENCFF739TYI 227 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat4 2 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
TCF7L1 2 datasets
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TFE3 2 datasets
Motif DE_12h DE_12h-TFE3_MA0831.3 10 bp overlap
ChIP K562 ENCFF697ABG 187 bp overlap
TFEB 1 dataset
Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 227 bp overlap
TOE1 2 datasets
ChIP K562 ENCFF728FRA 227 bp overlap
ChIP MCF-7 ENCFF544WQF 88 bp overlap
TP63 2 datasets
Motif DE_12h DE_12h-TP63_MA0525.2 18 bp overlap
Motif ES_0h ES_0h-TP63_MA0525.2 18 bp overlap
TRIM28 4 datasets
ChIP K-562 ENCSR474CVP.TRIM28.K-562 191 bp overlap
ChIP K-562 ENCSR000BRW.TRIM28.K-562 176 bp overlap
ChIP K562 ENCFF172UPN 227 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 108 bp overlap
Thap11 2 datasets
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
USF1 18 datasets
ChIP A-549 ENCSR000BJB.USF1.A-549 137 bp overlap
ChIP A-549 ENCSR000BHX.USF1.A-549 165 bp overlap
ChIP A-549 ENCSR000BPV.USF1.A-549 153 bp overlap
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 206 bp overlap
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 148 bp overlap
ChIP HCT116 ENCFF330PYP 227 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 121 bp overlap
ChIP Ishikawa ENCFF728IEG 76 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 219 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 227 bp overlap
ChIP K562 ENCFF202SFC 227 bp overlap
ChIP K562 ENCFF633EZB 179 bp overlap
ChIP SK-N-SH ENCFF967PDP 225 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 198 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 161 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 227 bp overlap
ChIP WTC11 ENCFF699QGS 227 bp overlap
USF2 13 datasets
ChIP A-549 ENCSR563FBT.USF2.A-549 218 bp overlap
ChIP A549 ENCFF343KII 227 bp overlap
Motif DE_12h DE_12h-USF2_MA0526.5 10 bp overlap
ChIP GM12878 GSE97661.USF2.GM12878 227 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 132 bp overlap
ChIP IMR-90 ENCFF438KUN 102 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 182 bp overlap
ChIP K-562 ENCSR359NFW.USF2.K-562 227 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 155 bp overlap
ChIP K562 ENCFF306QPU 227 bp overlap
ChIP K562 ENCFF397QGU 214 bp overlap
ChIP K562 ENCFF495XTL 197 bp overlap
ChIP WTC11 ENCFF139JAW 133 bp overlap
YY1 2 datasets
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 180 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 205 bp overlap
ZFX 4 datasets
ChIP K-562 ENCSR920ASP.ZFX.K-562 180 bp overlap
ChIP K562 ENCFF169LZT 227 bp overlap
ChIP K562 ENCFF536AJO 227 bp overlap
ChIP K562 ENCFF536AJO 227 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 131 bp overlap
ZNF12 2 datasets
ChIP K-562 ENCSR041YBR.ZNF12.K-562 158 bp overlap
ChIP K562 ENCFF867LAR 227 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF143 22 datasets
ChIP CUTLL1 GSE29600.ZNF143.CUTLL1 218 bp overlap
Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 171 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 189 bp overlap
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 227 bp overlap
ChIP GM12878 ENCSR000DZL.ZNF143.GM12878 162 bp overlap
ChIP HEK293T GSE39263.ZNF143.HEK293T 218 bp overlap
ChIP HeLa GSE39263.ZNF143.HeLa 227 bp overlap
ChIP HeLa-S3 ENCSR000ECO.ZNF143.HeLa-S3 134 bp overlap
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 227 bp overlap
ChIP Hep-G2 ENCSR101FJT.ZNF143.Hep-G2 117 bp overlap
ChIP HepG2 ENCFF658YIR 227 bp overlap
ChIP K-562 GSE39263.ZNF143.K-562 227 bp overlap
ChIP K-562 ENCSR000EGP.ZNF143.K-562 227 bp overlap
ChIP K562 ENCFF554TVF 222 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 227 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 227 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 220 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 227 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 227 bp overlap
ChIP WTC11 ENCFF249JUK 227 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 227 bp overlap
ZNF317 4 datasets
ChIP HEK293 GSE76494.ZNF317.HEK293 227 bp overlap
ChIP HEK293T GSE78099.ZNF317.HEK293T 103 bp overlap
ChIP K562 ENCFF896LCF 227 bp overlap
ChIP WTC11 ENCFF537KXI 227 bp overlap
ZNF507 2 datasets
ChIP K-562 ENCSR577KQD.ZNF507.K-562 219 bp overlap
ChIP K562 ENCFF235JOG 227 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF76 2 datasets
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap