chr5 : 50,967,500 – 50,967,900
400 bp 126 TFs 2 linked genes
This 400 bp open chromatin element is linked to ENSG00000248918 and LINC02106 and is bound by 126 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000248918 1.8 kb Proximal Proximity
LINC02106 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:50,962,500 – 50,972,900
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
126 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 126 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 400 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 133 bp overlap
BCOR 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 201 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 400 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 399 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 400 bp overlap
BMI1 2 datasets
ChIP GM12878 ENCSR469WII.BMI1.GM12878 297 bp overlap
ChIP HEK293T GSE34774.BMI1.HEK293T 231 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 242 bp overlap
BRD4 5 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 162 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 157 bp overlap
ChIP MV4-11_IBET_SGC GSE71776.BRD4.MV4-11_IBET_SGC 88 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 209 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 308 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 85 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CBX2 2 datasets
ChIP HEK293T GSE34774.CBX2.HEK293T 383 bp overlap
ChIP K-562 ENCSR000ATU.CBX2.K-562 280 bp overlap
CBX7 2 datasets
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 129 bp overlap
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 215 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 400 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 228 bp overlap
CREBBP 1 dataset
ChIP LS180 GSE39277.CREBBP.LS180 100 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 383 bp overlap
CTCF 1 dataset
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 188 bp overlap
CTNNB1 1 dataset
ChIP LS180 GSE31939.CTNNB1.LS180 115 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 364 bp overlap
E2F6 3 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 119 bp overlap
E2F8 1 dataset
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
EGR1 1 dataset
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
EGR2 2 datasets
Motif DE_12h DE_12h-EGR2_MA0472.2 11 bp overlap
ChIP HEK293 ENCFF336LFH 370 bp overlap
EGR3 1 dataset
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
EGR4 1 dataset
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 397 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 83 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 400 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 19 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 260 bp overlap
ChIP DOHH2 ENCFF528GDC 400 bp overlap
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 124 bp overlap
ChIP GM23338 ENCFF613YON 268 bp overlap
ChIP H1 ENCFF232NZA 400 bp overlap
ChIP SK-N-SH ENCFF657FZK 106 bp overlap
ChIP T98G GSE112240.EZH2.T98G 400 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 400 bp overlap
ChIP astrocyte ENCFF365JTP 227 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 66 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 264 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 400 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 174 bp overlap
ChIP hepatocyte ENCFF552DZB 400 bp overlap
ChIP keratinocyte ENCFF070STK 327 bp overlap
ChIP keratinocyte ENCFF070STK 302 bp overlap
ChIP neural progenitor cell ENCFF018MKA 400 bp overlap
ChIP neural progenitor cell ENCFF018MKA 269 bp overlap
ChIP neural progenitor cell ENCFF472NFV 400 bp overlap
EZH2_phosphoT487 1 dataset
ChIP DOHH2 ENCSR562NOP.EZH2_phosphoT487.DOHH2 327 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 168 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 326 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
IKZF1 4 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 226 bp overlap
ChIP GM12878 ENCFF753XDO 400 bp overlap
ChIP GM12878 ENCFF753XDO 330 bp overlap
ChIP GM12878 ENCFF824TGK 400 bp overlap
IKZF2 3 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 221 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 207 bp overlap
IRF1 12 datasets
ChIP AsPC-1 GSE141606.IRF1.AsPC-1 259 bp overlap
ChIP AsPC-1_IFNg GSE141606.IRF1.AsPC-1_IFNg 257 bp overlap
ChIP AsPC-1_ZBED2-cDNA GSE141606.IRF1.AsPC-1_ZBED2-cDNA 249 bp overlap
ChIP CD14_LPS GSE43036.IRF1.CD14_LPS 312 bp overlap
ChIP HAEC_IL1b_4h GSE89970.IRF1.HAEC_IL1b_4h 97 bp overlap
ChIP HAEC_TNFa_4h GSE89970.IRF1.HAEC_TNFa_4h 142 bp overlap
ChIP K-562 ENCSR854MCV.IRF1.K-562 333 bp overlap
ChIP K-562 ENCSR000EGL.IRF1.K-562 99 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 182 bp overlap
ChIP K562 ENCFF277KTJ 341 bp overlap
ChIP K562 ENCFF277KTJ 141 bp overlap
ChIP monocyte_nopretreatment GSE100381.IRF1.monocyte_nopretreatment 127 bp overlap
IRF2 4 datasets
ChIP CD34_ADULT GSE70660.IRF2.CD34_ADULT 175 bp overlap
ChIP K-562 ENCSR376WCJ.IRF2.K-562 172 bp overlap
ChIP K562 ENCFF248LJZ 234 bp overlap
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 400 bp overlap
IRF3 1 dataset
ChIP HBTEC_E1Ainfected_FOXKb GSE105037.IRF3.HBTEC_E1Ainfected_FOXKb 254 bp overlap
IRF4 2 datasets
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 193 bp overlap
IRF5 1 dataset
Motif DE_12h DE_12h-IRF5_MA1420.1 14 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 258 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 111 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 295 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 400 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 278 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 328 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 192 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 387 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 136 bp overlap
KLF1 4 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
ChIP HEK293 ENCFF159QSW 394 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 352 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 223 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 310 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 3 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 162 bp overlap
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
ChIP PDAC GSE64557.KLF4.PDAC 400 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 400 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MTF2 2 datasets
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 294 bp overlap
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 400 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 303 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 282 bp overlap
MYC 1 dataset
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 180 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 400 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 196 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 400 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 139 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 157 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 121 bp overlap
POLR2A 3 datasets
ChIP neural cell ENCFF604SPB 243 bp overlap
ChIP vagina ENCFF305NWS 149 bp overlap
ChIP vagina ENCFF384GAB 319 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 265 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 344 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RAD21 3 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 322 bp overlap
ChIP SK-N-SH ENCFF747MAS 231 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 264 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 68 bp overlap
RELA 1 dataset
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 400 bp overlap
REST 3 datasets
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 144 bp overlap
ChIP neural ENCSR000BTV.REST.neural 400 bp overlap
ChIP neural cell ENCFF882LXX 354 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 243 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 400 bp overlap
ChIP NCCIT GSE71675.RNF2.NCCIT 86 bp overlap
RUNX1 2 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 135 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 135 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 211 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 379 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 260 bp overlap
SMAD2_3 1 dataset
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 270 bp overlap
SP1 3 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
ChIP HEK293 GSE76494.SP1.HEK293 158 bp overlap
ChIP liver ENCFF597LFJ 251 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
ChIP HEK293 GSE76494.SP4.HEK293 198 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SPI1 2 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 219 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 110 bp overlap
SRSF3 1 dataset
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 202 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 167 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 147 bp overlap
STAT1::STAT2 1 dataset
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
SUZ12 4 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 106 bp overlap
ChIP H1 ENCFF881NFR 400 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 121 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 169 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TAF1 1 dataset
ChIP neural ENCSR000BTX.TAF1.neural 138 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX19 1 dataset
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TBXT 1 dataset
Motif DE_12h DE_12h-TBXT_MA0009.2 16 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 134 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 120 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD4 1 dataset
ChIP ESC S26-ESC-d0-TEAD4-exp1 263 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 156 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 120 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 156 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 400 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 222 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 319 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
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