chr3 : 80,770,562 – 80,770,967
405 bp 140 TFs 1 linked gene
This 405 bp open chromatin element is linked to LINC02050 and is bound by 140 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC02050 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:80,765,562 – 80,775,967
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
140 transcription factors
Source
Cell type
AR 27 datasets
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 315 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 253 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 200 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 231 bp overlap
ChIP LNCaP_1F5 GSE30623.AR.LNCaP_1F5 209 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 175 bp overlap
ChIP LNCaP_Bag-1L_KO_Veh GSE89938.AR.LNCaP_Bag-1L_KO_Veh 190 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 152 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 113 bp overlap
ChIP LNCaP_F266S_shFOXA1_Ethanol GSE128883.AR.LNCaP_F266S_shFOXA1_Ethanol 206 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.AR.LNCaP_FENG_shFOXA1_Ethanol 213 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 205 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 184 bp overlap
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 179 bp overlap
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 205 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 157 bp overlap
ChIP VCaP GSE148358.AR.VCaP 212 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 361 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 405 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 405 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 93 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 214 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 195 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 307 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 210 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 99 bp overlap
ChIP prostate-cancer_shTET2 GSE136128.AR.prostate-cancer_shTET2 186 bp overlap
ARID4B 2 datasets
ChIP K562 ENCFF791HBV 103 bp overlap
ChIP K562 ENCFF791HBV 404 bp overlap
ARNT 2 datasets
ChIP 501-mel GSE95280.ARNT.501-mel 393 bp overlap
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 261 bp overlap
ARNT::HIF1A 4 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_60h DE_60h-ARNTHIF1A_MA0259.2 5 bp overlap
ARRB1 1 dataset
ChIP LNCaP-C4-2 GSE55615.ARRB1.LNCaP-C4-2 229 bp overlap
ASCL1 4 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap
Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 143 bp overlap
ASH2L 2 datasets
ChIP VCaP GSE60841.ASH2L.VCaP 169 bp overlap
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 173 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 283 bp overlap
Ascl2 3 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 335 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 298 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 171 bp overlap
BHLHE22 3 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
BHLHE40 1 dataset
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 118 bp overlap
BICRA 1 dataset
ChIP Mel270_K700E GSE124720.BICRA.Mel270_K700E 204 bp overlap
BRD2 6 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 289 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 373 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 356 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 356 bp overlap
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 275 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 175 bp overlap
BRD4 21 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 396 bp overlap
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 210 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 150 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 316 bp overlap
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 197 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 215 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 370 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 322 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 264 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 318 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-075 216 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 304 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 273 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 372 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 405 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 397 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 349 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 388 bp overlap
ChIP VCaP_Darolutamide GSE148358.BRD4.VCaP_Darolutamide 309 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 254 bp overlap
ChIP hESC GSE33281.BRD4.hESC 99 bp overlap
Bhlha15 3 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap
CBFA2T3 1 dataset
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 233 bp overlap
CHD1 1 dataset
ChIP LNCaP_DHT GSE64528.CHD1.LNCaP_DHT 206 bp overlap
CHD2 1 dataset
ChIP K-562 ENCSR000EHD.CHD2.K-562 180 bp overlap
CREB1 6 datasets
ChIP K-562 ENCSR000BSO.CREB1.K-562 127 bp overlap
ChIP K562 ENCFF786DGQ 276 bp overlap
ChIP LNCaP GSE63034.CREB1.LNCaP 199 bp overlap
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 190 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 304 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 302 bp overlap
CREB3L1 1 dataset
ChIP K-562 ENCSR109YGM.CREB3L1.K-562 371 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 169 bp overlap
CREBBP 2 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 255 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 243 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 198 bp overlap
ChIP K562 ENCFF180STA 200 bp overlap
CSNK2A1 1 dataset
ChIP LNCaP_DHT GSE58607.CSNK2A1.LNCaP_DHT 236 bp overlap
CTBP1 4 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 331 bp overlap
ChIP K562 ENCFF403WPG 74 bp overlap
ChIP K562 ENCFF403WPG 365 bp overlap
ChIP K562 ENCFF403WPG 382 bp overlap
CTBP2 1 dataset
ChIP LNCaP_DHT24H GSE58428.CTBP2.LNCaP_DHT24H 208 bp overlap
CTCF 1 dataset
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
CXXC5 1 dataset
ChIP prostate-cancer GSE136128.CXXC5.prostate-cancer 233 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 240 bp overlap
ChIP BLaER1 ENCFF335XTP 141 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 267 bp overlap
ChIP K562 ENCFF574LOW 315 bp overlap
DDX21 1 dataset
ChIP A-375_1726plus GSE128080.DDX21.A-375_1726plus 198 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 305 bp overlap
E2F6 1 dataset
ChIP K-562 ENCSR000EWJ.E2F6.K-562 312 bp overlap
EGR1 4 datasets
ChIP GM12878 ENCFF784ATC 67 bp overlap
ChIP GM12878 ENCSR000BRG.EGR1.GM12878 184 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 277 bp overlap
ChIP K562 ENCFF895KGN 142 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 257 bp overlap
EP400 2 datasets
ChIP K-562 ENCSR817QKV.EP400.K-562 317 bp overlap
ChIP K562 ENCFF850OZQ 98 bp overlap
EPAS1 3 datasets
ChIP 501-mel GSE95280.EPAS1.501-mel 352 bp overlap
Motif DE_12h DE_12h-EPAS1_MA2325.1 9 bp overlap
ChIP K-562 GSE123461.EPAS1.K-562 59 bp overlap
ERG 7 datasets
ChIP VCaP GSE28950.ERG.VCaP 284 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 195 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 195 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 231 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 259 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 323 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 308 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 176 bp overlap
FOXA1 3 datasets
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 128 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 275 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 159 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR508DQA.FOXK2.K-562 212 bp overlap
ChIP K-562 ENCSR302AWT.FOXK2.K-562 270 bp overlap
GABPA 5 datasets
ChIP K-562 ENCSR000BLO.GABPA.K-562 238 bp overlap
ChIP K562 ENCFF996TSW 275 bp overlap
ChIP VCaP GSE49091.GABPA.VCaP 188 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 250 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 275 bp overlap
GABPB1 1 dataset
ChIP K-562 ENCSR138YYY.GABPB1.K-562 405 bp overlap
GLI3 1 dataset
Motif DE_60h DE_60h-GLI3_MA1491.3 15 bp overlap
GMEB1 3 datasets
ChIP K-562 ENCSR376RCX.GMEB1.K-562 315 bp overlap
ChIP K562 ENCFF679VBB 261 bp overlap
ChIP K562 ENCFF705LHX 405 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 405 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 244 bp overlap
HCFC1 1 dataset
ChIP K-562 ENCSR000EFN.HCFC1.K-562 121 bp overlap
HDAC1 6 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 258 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 246 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 84 bp overlap
ChIP K562 ENCFF928TKZ 363 bp overlap
ChIP PC-3 GSE147455.HDAC1.PC-3 244 bp overlap
ChIP PC-3_GDC-resist GSE147455.HDAC1.PC-3_GDC-resist 171 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 304 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 251 bp overlap
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 220 bp overlap
HDAC3 2 datasets
ChIP K-562 ENCSR024LKA.HDAC3.K-562 223 bp overlap
ChIP K562 ENCFF713GIR 288 bp overlap
HIF1A 9 datasets
ChIP 501-mel GSE95280.HIF1A.501-mel 346 bp overlap
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
Motif DE_60h DE_60h-HIF1A_MA1106.2 6 bp overlap
ChIP K-562 GSE123461.HIF1A.K-562 176 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-Y 146 bp overlap
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 297 bp overlap
ChIP PC-3_hypoxia_siSMAD3 GSE106305.HIF1A.PC-3_hypoxia_siSMAD3 257 bp overlap
HNRNPLL 4 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 385 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 385 bp overlap
ChIP K562 ENCFF541ZGX 345 bp overlap
ChIP K562 ENCFF598PWW 343 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 364 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 321 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 222 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR000EGK.IRF1.K-562 132 bp overlap
IRF4 1 dataset
ChIP BC-3 GSE132777.IRF4.BC-3 271 bp overlap
JUN 1 dataset
ChIP K-562 ENCSR000FAH.JUN.K-562 90 bp overlap
KDM1A 3 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 264 bp overlap
ChIP K562 ENCFF128TYE 394 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 216 bp overlap
KDM5B 1 dataset
ChIP K-562 ENCSR000AQA.KDM5B.K-562 128 bp overlap
KMT2B-D 1 dataset
ChIP SW480 GSE115985.KMT2B-D.SW480 302 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 405 bp overlap
ChIP K562 ENCFF320EQC 405 bp overlap
MAX 5 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 304 bp overlap
ChIP K562 ENCFF398VJM 65 bp overlap
ChIP K562 ENCFF398VJM 371 bp overlap
ChIP K562 ENCFF524IJO 273 bp overlap
ChIP melanocyte GSE115845.MAX.melanocyte 322 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 105 bp overlap
MBD2 2 datasets
ChIP HMEC-1 GSE63233.MBD2.HMEC-1 180 bp overlap
ChIP HMLER GSE63233.MBD2.HMLER 157 bp overlap
MED1 6 datasets
ChIP VCaP GSE148358.MED1.VCaP 273 bp overlap
ChIP VCaP_DHT GSE125245.MED1.VCaP_DHT 405 bp overlap
ChIP VCaP_DHTENZA GSE125245.MED1.VCaP_DHTENZA 251 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 284 bp overlap
ChIP VCaP_Veh GSE125245.MED1.VCaP_Veh 205 bp overlap
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 192 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR675LRO.MLLT1.K-562 256 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 243 bp overlap
MNT 2 datasets
ChIP K-562 ENCSR512NLO.MNT.K-562 272 bp overlap
ChIP K-562 ENCSR390VGH.MNT.K-562 337 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR914NEI.MTA3.K-562 292 bp overlap
ChIP K-562 ENCSR180NCY.MTA3.K-562 307 bp overlap
MYC 8 datasets
ChIP K-562 ENCSR000FAG.MYC.K-562 234 bp overlap
ChIP K-562 ENCSR000EGJ.MYC.K-562 163 bp overlap
ChIP K-562 ENCSR000EGS.MYC.K-562 135 bp overlap
ChIP K-562 ENCSR000DLZ.MYC.K-562 115 bp overlap
ChIP K562 ENCFF988ZRU 318 bp overlap
ChIP LNCaP GSE117430.MYC.LNCaP 212 bp overlap
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 198 bp overlap
ChIP NB69 GSE138295.MYC.NB69 405 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 264 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 405 bp overlap
MYF5 4 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
ChIP Rh18 GSE84628.MYF5.Rh18 206 bp overlap
MYOD1 3 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
MYOG 3 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
NANOG 2 datasets
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 215 bp overlap
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 220 bp overlap
NCOA6 2 datasets
ChIP K-562 ENCSR168CEE.NCOA6.K-562 299 bp overlap
ChIP K562 ENCFF471USR 162 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 240 bp overlap
NELFA 2 datasets
ChIP K-562_HS GSE112379.NELFA.K-562_HS 337 bp overlap
ChIP K-562_NHS GSE112379.NELFA.K-562_NHS 180 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 338 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 266 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 211 bp overlap
NFRKB 1 dataset
ChIP K-562 ENCSR657EOF.NFRKB.K-562 299 bp overlap
NFXL1 1 dataset
ChIP K-562 ENCSR085DDI.NFXL1.K-562 110 bp overlap
NHLH1 3 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 226 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 178 bp overlap
NRF1 5 datasets
ChIP K-562 ENCSR998AJK.NRF1.K-562 283 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 302 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 176 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 122 bp overlap
ChIP K562 ENCFF689EWI 171 bp overlap
Neurod2 3 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
OGT 1 dataset
ChIP PC-3_OSMI-2 GSE112667.OGT.PC-3_OSMI-2 219 bp overlap
Olig2 3 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PHF8 2 datasets
ChIP K-562 ENCSR000AQH.PHF8.K-562 321 bp overlap
ChIP K562 ENCFF217UCA 390 bp overlap
PKNOX1 1 dataset
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 106 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 160 bp overlap
POLR2A 5 datasets
ChIP GM12878 ENCFF521FXC 395 bp overlap
ChIP GM18951 ENCFF079KKO 201 bp overlap
ChIP GM18951 ENCFF079KKO 139 bp overlap
ChIP K562 ENCFF137JSF 327 bp overlap
ChIP K562 ENCFF836GHX 140 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 405 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 216 bp overlap
ChIP K562 ENCFF648YPL 216 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 192 bp overlap
PYGO2 1 dataset
ChIP K-562 ENCSR431XGJ.PYGO2.K-562 138 bp overlap
Ptf1A 3 datasets
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
RBFOX2 2 datasets
ChIP K562 ENCFF196WTG 405 bp overlap
ChIP K562 ENCFF967GRF 405 bp overlap
RBM39 1 dataset
ChIP K-562 ENCSR764OXF.RBM39.K-562 154 bp overlap
RUNX1 2 datasets
ChIP H9_DOX-5_HA GSE137670.RUNX1.H9_DOX-5_HA 283 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 405 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 242 bp overlap
SFPQ 3 datasets
ChIP LTAD_DHT-1nM GSE94577.SFPQ.LTAD_DHT-1nM 275 bp overlap
ChIP LTAD_EtOH GSE94577.SFPQ.LTAD_EtOH 232 bp overlap
ChIP LTAD_siCTBP1-AS-EtOH GSE94577.SFPQ.LTAD_siCTBP1-AS-EtOH 260 bp overlap
SIN3A 2 datasets
ChIP K-562 ENCSR920BLG.SIN3A.K-562 145 bp overlap
ChIP K562 ENCFF397YHR 239 bp overlap
SMAD3 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 341 bp overlap
SMAD3-HIF1A 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3-HIF1A.PC-3_hypoxia 254 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 193 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 180 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 126 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 219 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 261 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 189 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 132 bp overlap
SUPT5H 1 dataset
ChIP K562 ENCFF902PAW 219 bp overlap
TAF1 2 datasets
ChIP K-562 ENCSR000BKS.TAF1.K-562 199 bp overlap
ChIP K562 ENCFF491WAE 283 bp overlap
TAF7 2 datasets
ChIP K-562 ENCSR671GFC.TAF7.K-562 322 bp overlap
ChIP K562 ENCFF314WLE 331 bp overlap
TAF9B 2 datasets
ChIP K-562 ENCSR100UQX.TAF9B.K-562 259 bp overlap
ChIP K562 ENCFF121ZIF 405 bp overlap
TARDBP 5 datasets
ChIP K-562 ENCSR429XTR.TARDBP.K-562 171 bp overlap
ChIP K-562 GSE120104.TARDBP.K-562 185 bp overlap
ChIP K562 ENCFF021QCU 242 bp overlap
ChIP K562 ENCFF021QCU 405 bp overlap
ChIP K562 ENCFF059WCS 271 bp overlap
TBP 3 datasets
ChIP K-562 ENCSR000EHA.TBP.K-562 117 bp overlap
ChIP K-562 GSE55306.TBP.K-562 207 bp overlap
ChIP K562 ENCFF901UYM 191 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 204 bp overlap
TET2 1 dataset
ChIP prostate-cancer GSE136128.TET2.prostate-cancer 235 bp overlap
TFAP4 5 datasets
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
ChIP K562 ENCFF727PXG 307 bp overlap
ChIP LNCaP GSE28857.TFAP4.LNCaP 212 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 102 bp overlap
TOP1 2 datasets
ChIP LNCaP GSE63202.TOP1.LNCaP 233 bp overlap
ChIP LNCaP_DHT GSE63202.TOP1.LNCaP_DHT 226 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 298 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 299 bp overlap
Tcf12 3 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Twist2 3 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
XBP1 3 datasets
ChIP LNCaP_R1881 GSE121880.XBP1.LNCaP_R1881 207 bp overlap
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 350 bp overlap
ChIP LNCaP_px330 GSE121880.XBP1.LNCaP_px330 333 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 173 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 234 bp overlap
ZBTB2 2 datasets
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 318 bp overlap
ChIP K562 ENCFF290ESQ 235 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 277 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 405 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 121 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 152 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 286 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 70 bp overlap
ZKSCAN1 1 dataset
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 152 bp overlap
ZNF143 1 dataset
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 226 bp overlap
ZNF410 1 dataset
ChIP K-562 GSE97661.ZNF410.K-562 190 bp overlap
Huangfu Lab · Publications · Resources · Contact