chr20 : 2,799,718 2,800,074
356 bp 111 TFs 1 linked gene
This 356 bp open chromatin element is linked to CPXM1 and is bound by 111 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CPXM1 552 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:2,794,718 – 2,805,074
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 356 bp overlap
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 325 bp overlap
AR 2 datasets
ChIP myofibroblast GSE90772.AR.myofibroblast 356 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 100 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 129 bp overlap
ChIP H1 ENCFF399KAM 77 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 356 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 90 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 263 bp overlap
BRD4 11 datasets
ChIP CLB-Ga_Dinaciclib GSE133453.BRD4.CLB-Ga_Dinaciclib 135 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 115 bp overlap
ChIP SEM GSE83671.BRD4.SEM 209 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 274 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 149 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 299 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 356 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 224 bp overlap
ChIP hESC GSE33281.BRD4.hESC 60 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 285 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 356 bp overlap
CDK8 4 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 88 bp overlap
ChIP leiomyoma_PT967 GSE128230.CDK8.leiomyoma_PT967 57 bp overlap
ChIP myometrium_PT967 GSE128230.CDK8.myometrium_PT967 78 bp overlap
ChIP myometrium_PT967 GSE128230.CDK8.myometrium_PT967 59 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 241 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 311 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 102 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 163 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 311 bp overlap
DNMT1 1 dataset
ChIP HepG2 ENCFF153HEB 74 bp overlap
DPF2 1 dataset
ChIP HepG2 ENCFF700HHQ 148 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 128 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 243 bp overlap
E4F1 1 dataset
ChIP GM12878 ENCSR439WAF.E4F1.GM12878 356 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 147 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 209 bp overlap
EP300 1 dataset
ChIP neural cell ENCFF442QNK 109 bp overlap
ESR1 6 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 54 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 169 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 51 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 115 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 356 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 113 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 99 bp overlap
ETS1 5 datasets
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 178 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 251 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 178 bp overlap
ChIP cardiomyocyte_D5 GSE129986.ETS1.cardiomyocyte_D5 231 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 112 bp overlap
EVI1 2 datasets
ChIP SKH1 GSE87283.EVI1.SKH1 62 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.EVI1.SKH1_RUNX1-EVI1_KD 55 bp overlap
EZH2 25 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 67 bp overlap
ChIP A673 ENCFF790MVL 198 bp overlap
ChIP A673 ENCFF955JRZ 68 bp overlap
ChIP DND-41 ENCFF187XWF 281 bp overlap
ChIP GM23248 ENCFF404ZHM 195 bp overlap
ChIP GM23338 ENCFF613YON 356 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 280 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 356 bp overlap
ChIP HepG2 ENCFF912EIW 356 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 119 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 115 bp overlap
ChIP MM.1S ENCFF138BXR 356 bp overlap
ChIP T98G GSE112240.EZH2.T98G 207 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 356 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 231 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 264 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 356 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 356 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 356 bp overlap
ChIP fibroblast of lung ENCFF479BAW 91 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 356 bp overlap
ChIP keratinocyte ENCFF070STK 111 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ARH.EZH2.myoblast_skeletal_muscle 100 bp overlap
ChIP myotube ENCFF857GWB 72 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 159 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 71 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 233 bp overlap
FOXP1 2 datasets
ChIP WTC11 ENCFF338WGC 101 bp overlap
ChIP neural-progenitor GSE62718.FOXP1.neural-progenitor 141 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 238 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 58 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 283 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 52 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 82 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 156 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 61 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 230 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 207 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 258 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 159 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 129 bp overlap
KAT7 1 dataset
ChIP WTC11 ENCFF581TPB 213 bp overlap
KDM1A 2 datasets
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 106 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 146 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 196 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 164 bp overlap
KMT2A 4 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 356 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 356 bp overlap
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 356 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 356 bp overlap
MAFF 1 dataset
ChIP HepG2 ENCFF452YUT 176 bp overlap
MAFK 7 datasets
ChIP A549 ENCFF371EPR 251 bp overlap
ChIP H1 ENCFF854XWE 134 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 222 bp overlap
ChIP HepG2 ENCFF743ZOF 163 bp overlap
ChIP HepG2 ENCFF767LDG 151 bp overlap
ChIP IMR-90 ENCFF336DHZ 189 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 80 bp overlap
MAX 6 datasets
ChIP H1 ENCFF914VQY 67 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 116 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 116 bp overlap
ChIP SK-N-SH ENCFF285LXR 278 bp overlap
ChIP WTC11 ENCFF223QFY 192 bp overlap
ChIP WTC11 ENCFF223QFY 62 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 145 bp overlap
MECOM 2 datasets
ChIP SKH1 GSE102697.MECOM.SKH1 63 bp overlap
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 77 bp overlap
MED1 1 dataset
ChIP UCSD-AML1 GSE154985.MED1.UCSD-AML1 105 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 71 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 123 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 64 bp overlap
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 207 bp overlap
MXI1 3 datasets
ChIP SK-N-SH ENCFF746HVJ 141 bp overlap
ChIP neural ENCSR934NHU.MXI1.neural 67 bp overlap
ChIP neural cell ENCFF623HQN 158 bp overlap
MYC 3 datasets
ChIP NB69 GSE138295.MYC.NB69 356 bp overlap
ChIP P493-6_24HR GSE125863.MYC.P493-6_24HR 243 bp overlap
ChIP SK-N-SH GSE138295.MYC.SK-N-SH 330 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 356 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 356 bp overlap
MYNN 2 datasets
ChIP K-562 ENCSR737LTZ.MYNN.K-562 85 bp overlap
ChIP K562 ENCFF399UNK 64 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 273 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 183 bp overlap
NFKB1 1 dataset
ChIP CD4-pos GSE126505.NFKB1.CD4-pos 260 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 123 bp overlap
NONO 1 dataset
ChIP HepG2 ENCFF361UQH 226 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 314 bp overlap
NR3C1 3 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 57 bp overlap
ChIP WTC11 ENCFF422OEM 356 bp overlap
ChIP WTC11 ENCFF422OEM 300 bp overlap
NRF1 1 dataset
ChIP Namalwa GSE53133.NRF1.Namalwa 69 bp overlap
NRL 1 dataset
ChIP HepG2 ENCFF528PUT 151 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 103 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 115 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 85 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 121 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 93 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 356 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 321 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 351 bp overlap
POLR2A 4 datasets
ChIP GM19099 ENCFF726IBN 312 bp overlap
ChIP GM19099 ENCFF726IBN 88 bp overlap
ChIP H54 ENCFF398BXN 84 bp overlap
ChIP neural cell ENCFF604SPB 98 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 71 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 356 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 168 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 128 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 116 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 145 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 60 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 87 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 356 bp overlap
ChIP neural cell ENCFF882LXX 153 bp overlap
RNF2 5 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 132 bp overlap
ChIP H1 ENCFF239FFS 124 bp overlap
ChIP HepG2 ENCFF737WCD 121 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 103 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 113 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 55 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 179 bp overlap
SAFB 1 dataset
ChIP K562 ENCFF765XSF 59 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 356 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 356 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 55 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 66 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 67 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 88 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 217 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 157 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 74 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 87 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 101 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 127 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 249 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 268 bp overlap
SRSF3 2 datasets
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 99 bp overlap
ChIP K-562 GSE120104.SRSF3.K-562 98 bp overlap
SUZ12 3 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 279 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 99 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 119 bp overlap
TAF1 3 datasets
ChIP SK-N-SH ENCFF630ERV 297 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 118 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 262 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 55 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 78 bp overlap
YY1 5 datasets
ChIP ALL GSE145549.YY1.ALL 186 bp overlap
ChIP H1 ENCFF524BTL 190 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 106 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 210 bp overlap
ChIP WA01 GSE39096.YY1.WA01 93 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 187 bp overlap
ChIP K562 ENCFF875HLX 91 bp overlap
ZBTB43 3 datasets
ChIP K562 ENCFF722QWH 98 bp overlap
ChIP WTC11 ENCFF058JUB 136 bp overlap
ChIP WTC11 ENCFF058JUB 136 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 356 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH ENCFF981MBE 57 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 356 bp overlap
ZNF143 5 datasets
ChIP WA01 ENCSR000EBW.ZNF143.WA01 211 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 180 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 196 bp overlap
ChIP WTC11 ENCFF249JUK 214 bp overlap
ChIP WTC11 ENCFF249JUK 356 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 56 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 245 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 59 bp overlap
ZNF646 1 dataset
ChIP HepG2 ENCFF141MBP 50 bp overlap
ZNF839 2 datasets
ChIP HepG2 ENCFF481VFR 178 bp overlap
ChIP HepG2 ENCFF481VFR 356 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 98 bp overlap