chr20:1,061,388–1,061,918

chr20 : 1,061,388 – 1,061,918

530 bp 105 TFs 6 linked genes

This 530 bp open chromatin element is linked to 6 target genes and is bound by 105 transcription factors.

Linked Genes

6 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000286787		56.8 kb	Distal	Multiome
PSMF1		57.0 kb	Distal	Multiome
TMEM74B		123.8 kb	Distal	Multiome
FAM110A		227.9 kb	Distal	Multiome
SDCBP2-AS1		263.8 kb	Distal	Multiome
SLC52A3		285.7 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

105 transcription factors

ARID1B 2 datasets

ChIP K-562 ENCSR822CCM.ARID1B.K-562 530 bp overlap

ChIP K562 ENCFF938UXQ 423 bp overlap

ASCL1 1 dataset

Motif DE_72h DE_72h-ASCL1_MA1100.3 8 bp overlap

ChIP K-562 ENCSR091GVJ.ATF1.K-562 364 bp overlap

ATF3 2 datasets

ChIP K-562 ENCSR028UIU.ATF3.K-562 160 bp overlap

ChIP K-562 ENCSR028UIU.ATF3.K-562 164 bp overlap

ChIP K562 ENCFF674KTF 79 bp overlap

ATF7 3 datasets

ChIP K-562 ENCSR972ZBV.ATF7.K-562 530 bp overlap

ChIP K562 ENCFF308SKS 450 bp overlap

ChIP K562 ENCFF308SKS 207 bp overlap

ChIP OCI-Ly1_UV GSE103125.BCL6.OCI-Ly1_UV 260 bp overlap

BHLHE22 1 dataset

Motif DE_72h DE_72h-BHLHE22_MA1635.2 6 bp overlap

CBFA2T2 2 datasets

ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 406 bp overlap

ChIP K562 ENCFF963TXY 204 bp overlap

CBFA2T3 2 datasets

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 425 bp overlap

ChIP K562 ENCFF673OEZ 283 bp overlap

CCNT2 2 datasets

ChIP K-562 ENCSR000DOA.CCNT2.K-562 282 bp overlap

ChIP K562 ENCFF199GSZ 425 bp overlap

CEBPD 1 dataset

ChIP K-562 ENCSR000BVY.CEBPD.K-562 153 bp overlap

CTBP1 2 datasets

ChIP K-562 ENCSR201NQZ.CTBP1.K-562 530 bp overlap

ChIP K562 ENCFF403WPG 512 bp overlap

DPF2 3 datasets

ChIP K-562 ENCSR219BXP.DPF2.K-562 206 bp overlap

ChIP K562 ENCFF739JDE 450 bp overlap

ChIP K562 ENCFF775HUO 262 bp overlap

ELF4 4 datasets

ChIP HEK293T ENCFF509MGU 80 bp overlap

ChIP HEK293T ENCSR778QLY.ELF4.HEK293T 88 bp overlap

ChIP K-562 ENCSR638QHV.ELF4.K-562 98 bp overlap

ChIP K562 ENCFF454SBL 94 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 292 bp overlap

EP300 2 datasets

ChIP K-562 ENCSR000EGE.EP300.K-562 286 bp overlap

ChIP K562 ENCFF226VMS 317 bp overlap

ERF::NHLH1 1 dataset

Motif DE_72h DE_72h-ERFNHLH1_MA1938.2 16 bp overlap

ESR1 4 datasets

ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 204 bp overlap

ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 303 bp overlap

ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 182 bp overlap

ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 187 bp overlap

ESRRA 2 datasets

ChIP K-562 ENCSR486IFJ.ESRRA.K-562 530 bp overlap

ChIP K562 ENCFF968PEP 251 bp overlap

ChIP MCF-7 ENCFF282FWZ 87 bp overlap

FOSL1 2 datasets

ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 472 bp overlap

ChIP K562 ENCFF455MKD 530 bp overlap

FOXA1 1 dataset

ChIP K562 ENCFF954GIJ 331 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 530 bp overlap

ChIP DE DE-FOXA2-2 512 bp overlap

FOXA3 1 dataset

ChIP K562 ENCFF781VSC 229 bp overlap

FOXJ2 2 datasets

ChIP K-562 ENCSR847LBF.FOXJ2.K-562 276 bp overlap

ChIP K562 ENCFF457GZC 521 bp overlap

FOXK2 3 datasets

ChIP GM12878 ENCSR861JUQ.FOXK2.GM12878 68 bp overlap

ChIP K-562 ENCSR508DQA.FOXK2.K-562 103 bp overlap

ChIP K562 ENCFF851PFH 254 bp overlap

FOXM1 2 datasets

ChIP K-562 ENCSR429QPP.FOXM1.K-562 281 bp overlap

ChIP K562 ENCFF255RHV 128 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap

GATA1 10 datasets

ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 193 bp overlap

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 285 bp overlap

ChIP K-562 GSE107726.GATA1.K-562 413 bp overlap

ChIP K-562 ENCSR000EFT.GATA1.K-562 337 bp overlap

ChIP K-562_MYO1D-Non-hub_KO GSE107726.GATA1.K-562_MYO1D-Non-hub_KO 220 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 269 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 215 bp overlap

ChIP K562 ENCFF094CMK 121 bp overlap

ChIP erythroblast ENCFF867JAR 460 bp overlap

ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 366 bp overlap

GATA2 5 datasets

ChIP K-562 ENCSR000DKA.GATA2.K-562 527 bp overlap

ChIP K-562 ENCSR000BKM.GATA2.K-562 137 bp overlap

ChIP K562 ENCFF544PCK 251 bp overlap

ChIP K562 ENCFF830LLA 493 bp overlap

ChIP TF1 GSE73207.GATA2.TF1 319 bp overlap

GATA4 6 datasets

ChIP DE DE-GATA4-1 530 bp overlap

ChIP DE DE-GATA4-2 530 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 243 bp overlap

ChIP foregut GSE117136.GATA4.foregut 473 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 453 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 436 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 530 bp overlap

ChIP DE DE-GATA6-2 530 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 530 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 357 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 509 bp overlap

ChIP foregut GSE117136.GATA6.foregut 511 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 342 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 385 bp overlap

GFI1B 1 dataset

ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 182 bp overlap

HDAC1 2 datasets

ChIP K-562 ENCSR387UWP.HDAC1.K-562 530 bp overlap

ChIP K562 ENCFF968WBH 328 bp overlap

HDAC2 3 datasets

ChIP K-562 ENCSR075HTM.HDAC2.K-562 328 bp overlap

ChIP K-562 ENCSR000BMG.HDAC2.K-562 116 bp overlap

ChIP K-562 GSE140325.HDAC2.K-562 92 bp overlap

HDAC8 1 dataset

ChIP K-562 ENCSR835TCD.HDAC8.K-562 64 bp overlap

ChIP K562 ENCFF919JVU 371 bp overlap

HMBOX1 1 dataset

ChIP K-562 ENCSR757IIU.HMBOX1.K-562 167 bp overlap

HMGN3 1 dataset

ChIP K-562 ENCSR000DOB.HMGN3.K-562 218 bp overlap

HOXB8 1 dataset

ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 141 bp overlap

IKZF1 3 datasets

ChIP K-562 ENCSR395HWC.IKZF1.K-562 280 bp overlap

ChIP K562 ENCFF348IBL 220 bp overlap

ChIP K562 ENCFF348IBL 421 bp overlap

ChIP K-562 GSE103215.ILF3.K-562 530 bp overlap

ChIP K-562 ENCSR000FAH.JUN.K-562 90 bp overlap

ChIP K-562 ENCSR000DJY.JUNB.K-562 305 bp overlap

ChIP K562 ENCFF336RCR 121 bp overlap

KDM1A 2 datasets

ChIP K-562 GSE117944.KDM1A.K-562 397 bp overlap

ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 530 bp overlap

KLF16 1 dataset

ChIP K-562 ENCSR760UVO.KLF16.K-562 144 bp overlap

L3MBTL2 2 datasets

ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 399 bp overlap

ChIP K562 ENCFF320EQC 486 bp overlap

LDB1 2 datasets

ChIP HEP GSE52637.LDB1.HEP 130 bp overlap

ChIP K-562 GSE142227.LDB1.K-562 374 bp overlap

LEF1 2 datasets

ChIP K-562 ENCSR343ELW.LEF1.K-562 207 bp overlap

ChIP K562 ENCFF198WCP 432 bp overlap

MAFG 2 datasets

ChIP K-562 ENCSR818DQV.MAFG.K-562 530 bp overlap

ChIP K562 ENCFF455EEO 81 bp overlap

ChIP K-562 ENCSR000EFV.MAX.K-562 143 bp overlap

MEIS2 1 dataset

ChIP K-562 ENCSR851BNE.MEIS2.K-562 156 bp overlap

MTA2 2 datasets

ChIP K-562 ENCSR113LAS.MTA2.K-562 357 bp overlap

ChIP K562 ENCFF880VZB 190 bp overlap

ChIP K-562 ENCSR180NCY.MTA3.K-562 448 bp overlap

ChIP K-562 ENCSR000EGJ.MYC.K-562 161 bp overlap

Motif DE_72h DE_72h-MYOG_MA0500.3 8 bp overlap

NCOA1 2 datasets

ChIP K-562 ENCSR658WFQ.NCOA1.K-562 248 bp overlap

ChIP K562 ENCFF962VHQ 451 bp overlap

NCOR1 4 datasets

ChIP K-562 ENCSR910JAI.NCOR1.K-562 319 bp overlap

ChIP K-562 ENCSR798ILC.NCOR1.K-562 244 bp overlap

ChIP K562 ENCFF788MPU 396 bp overlap

ChIP K562 ENCFF866HRM 423 bp overlap

NFE2 3 datasets

ChIP K-562 ENCSR552YGL.NFE2.K-562 114 bp overlap

ChIP K562 ENCFF047YKA 76 bp overlap

ChIP ProEs GSE59087.NFE2.ProEs 106 bp overlap

NFE2L1 1 dataset

ChIP K-562 ENCSR632SHZ.NFE2L1.K-562 106 bp overlap

NFE2L2 1 dataset

ChIP K-562 ENCSR485GKE.NFE2L2.K-562 119 bp overlap

NHLH1 1 dataset

Motif DE_72h DE_72h-NHLH1_MA0048.3 9 bp overlap

ChIP K-562 ENCSR010KFT.NONO.K-562 139 bp overlap

NR2C1 3 datasets

ChIP K-562 ENCSR178DEG.NR2C1.K-562 108 bp overlap

ChIP K562 ENCFF568JLK 135 bp overlap

ChIP K562 ENCFF568JLK 341 bp overlap

NR2C2 2 datasets

ChIP K-562 ENCSR750LYM.NR2C2.K-562 229 bp overlap

ChIP K562 ENCFF750AXF 362 bp overlap

NR2F1 2 datasets

ChIP K-562 ENCSR970NKQ.NR2F1.K-562 447 bp overlap

ChIP K562 ENCFF221HJH 215 bp overlap

NR2F6 1 dataset

ChIP K-562 ENCSR707QWA.NR2F6.K-562 143 bp overlap

Neurod2 1 dataset

Motif DE_72h DE_72h-Neurod2_MA1993.2 6 bp overlap

Olig2 1 dataset

Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap

ChIP K-562 ENCSR263DFP.PBX2.K-562 301 bp overlap

PKNOX1 1 dataset

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 367 bp overlap

ChIP K-562 ENCSR000BQY.PML.K-562 275 bp overlap

ChIP K562 ENCFF801LKH 423 bp overlap

Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap

RCOR1 1 dataset

ChIP K562 ENCFF216EEJ 297 bp overlap

ChIP K562 ENCFF653BQJ 314 bp overlap

SMAD1 1 dataset

ChIP K-562 ENCSR038DJJ.SMAD1.K-562 149 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 530 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 359 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 523 bp overlap

SMARCA4 2 datasets

ChIP K-562 ENCSR587OQL.SMARCA4.K-562 495 bp overlap

ChIP K562 ENCFF506JCB 298 bp overlap

SMARCE1 2 datasets

ChIP K-562 ENCSR157TCS.SMARCE1.K-562 530 bp overlap

ChIP K562 ENCFF690CFF 282 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 294 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 373 bp overlap

SOX6 2 datasets

ChIP K-562 ENCSR788RSW.SOX6.K-562 524 bp overlap

ChIP K562 ENCFF059YCJ 301 bp overlap

TAL1 14 datasets

ChIP CD34 GSE52924.TAL1.CD34 164 bp overlap

ChIP K-562 ENCSR106FRG.TAL1.K-562 495 bp overlap

ChIP K-562 GSE107726.TAL1.K-562 418 bp overlap

ChIP K-562 ENCSR000EHB.TAL1.K-562 360 bp overlap

ChIP K-562_MYO1D-Hub_KO GSE107726.TAL1.K-562_MYO1D-Hub_KO 232 bp overlap

ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 297 bp overlap

ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 265 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 276 bp overlap

ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 261 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 247 bp overlap

ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 297 bp overlap

ChIP K562 ENCFF620GMX 371 bp overlap

ChIP K562 ENCFF661CCK 145 bp overlap

ChIP ProEs GSE59087.TAL1.ProEs 319 bp overlap

TBL1XR1 1 dataset

ChIP K-562 ENCSR000EGB.TBL1XR1.K-562 139 bp overlap

TCF12 4 datasets

ChIP K-562 ENCSR744WOO.TCF12.K-562 374 bp overlap

ChIP K-562 ENCSR189TRZ.TCF12.K-562 303 bp overlap

ChIP K562 ENCFF909RDY 397 bp overlap

ChIP K562 ENCFF931DJY 216 bp overlap

TCF3 2 datasets

ChIP K-562 ENCSR970OJY.TCF3.K-562 503 bp overlap

ChIP K562 ENCFF319QZT 164 bp overlap

TEAD4 1 dataset

ChIP K562 ENCFF673NIK 230 bp overlap

TRIM24 1 dataset

ChIP K-562 ENCSR907MZR.TRIM24.K-562 305 bp overlap

Tcf12 1 dataset

Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap

USF2 3 datasets

ChIP K562 ENCFF306QPU 122 bp overlap

ChIP K562 ENCFF306QPU 330 bp overlap

ChIP K562 ENCFF306QPU 519 bp overlap

ZBTB40 7 datasets

ChIP GM12878 ENCFF346DYM 183 bp overlap

ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 61 bp overlap

ChIP Hep-G2 ENCSR525YFS.ZBTB40.Hep-G2 109 bp overlap

ChIP K-562 ENCSR237VLT.ZBTB40.K-562 179 bp overlap

ChIP K562 ENCFF521DSV 169 bp overlap

ChIP MCF-7 ENCFF044DWL 50 bp overlap

ChIP MCF-7 ENCSR318LVG.ZBTB40.MCF-7 110 bp overlap

ZBTB5 2 datasets

ChIP K-562 ENCSR786OQY.ZBTB5.K-562 57 bp overlap

ChIP K562 ENCFF856PUG 90 bp overlap

ZBTB7A 2 datasets

ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 386 bp overlap

ChIP K-562 GSE103445.ZBTB7A.K-562 145 bp overlap

ZEB2 3 datasets

ChIP K-562 ENCSR004GKA.ZEB2.K-562 325 bp overlap

ChIP K-562 ENCSR322CFO.ZEB2.K-562 368 bp overlap

ChIP K562 ENCFF795CMH 206 bp overlap

ChIP K562 ENCFF536AJO 530 bp overlap

ZMIZ1 1 dataset

ChIP K-562 ENCSR000EFQ.ZMIZ1.K-562 145 bp overlap

ZNF257 2 datasets

ChIP K-562 ENCSR492FKD.ZNF257.K-562 198 bp overlap

ChIP K562 ENCFF849YZP 261 bp overlap

ZNF35 1 dataset

ChIP HEK293 GSE76494.ZNF35.HEK293 151 bp overlap

ZNF418 1 dataset

Motif DE_72h DE_72h-ZNF418_MA1980.1 15 bp overlap

ZNF582 1 dataset

Motif DE_72h DE_72h-ZNF582_MA1983.2 19 bp overlap

ZNF766 1 dataset

ChIP K562 ENCFF348LDO 526 bp overlap