chr16 : 6,483,235 6,483,923
688 bp 116 TFs 0 linked genes
This 688 bp open chromatin element has no linked target genes and is bound by 116 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:6,478,235 – 6,488,923
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
116 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 78 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 218 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 198 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 195 bp overlap
ARNT 1 dataset
ChIP 501-mel GSE95280.ARNT.501-mel 184 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 473 bp overlap
ChIP H1 ENCFF399KAM 267 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 226 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 120 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 147 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 181 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 308 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 688 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 173 bp overlap
BRD4 7 datasets
ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 61 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 130 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 100 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 312 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 268 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 206 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 262 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 231 bp overlap
CTCF 6 datasets
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 261 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 210 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 215 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 151 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 114 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 376 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 159 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 196 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 278 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 240 bp overlap
ELF1 1 dataset
ChIP ME-1 GSE46044.ELF1.ME-1 135 bp overlap
ERF::NHLH1 3 datasets
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
Motif DE_24h DE_24h-ERFNHLH1_MA1938.2 16 bp overlap
Motif ES_0h ES_0h-ERFNHLH1_MA1938.2 16 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 230 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 132 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 79 bp overlap
ESR1 7 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 199 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 224 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 161 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 185 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 194 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 182 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 126 bp overlap
EZH2 8 datasets
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 181 bp overlap
ChIP T98G GSE112240.EZH2.T98G 175 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 185 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 222 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 205 bp overlap
ChIP neural progenitor cell ENCFF472NFV 481 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 181 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 308 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 126 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 350 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
GABPA 2 datasets
ChIP H1 ENCFF739QFD 277 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 174 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 219 bp overlap
GLIS2 1 dataset
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
GTF2F1 2 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 64 bp overlap
ChIP K-562 GSE120104.GTF2F1.K-562 64 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 230 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 238 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 241 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 80 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 220 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 222 bp overlap
KDM1A 5 datasets
ChIP H1 ENCFF696SGD 125 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 139 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 280 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 236 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 221 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 659 bp overlap
ChIP H1 ENCFF078LED 348 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 454 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 155 bp overlap
KDM6B 2 datasets
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 203 bp overlap
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 168 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MED26 2 datasets
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 346 bp overlap
ChIP U2OS_SHEP400 GSE73742.MED26.U2OS_SHEP400 276 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MITF 1 dataset
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 259 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 197 bp overlap
MTF1 1 dataset
Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 201 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 161 bp overlap
MYC 7 datasets
ChIP NB69 GSE138295.MYC.NB69 586 bp overlap
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 109 bp overlap
ChIP U2OS_Doxy GSE77328.MYC.U2OS_Doxy 113 bp overlap
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 126 bp overlap
ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 82 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 147 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 105 bp overlap
MYC-DAXX 1 dataset
ChIP HEK293_GAL4-DBD GSE107348.MYC-DAXX.HEK293_GAL4-DBD 177 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 535 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 688 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 175 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 204 bp overlap
NFKBIA 1 dataset
ChIP dermal GSE30082.NFKBIA.dermal 205 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 296 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 660 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 184 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 98 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 95 bp overlap
OLIG2 2 datasets
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 101 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 140 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 104 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 556 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 146 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 265 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 240 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 278 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 165 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 274 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 141 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 227 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 210 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 688 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 105 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 223 bp overlap
REST 7 datasets
ChIP GM23338 ENCFF024TCL 265 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 200 bp overlap
ChIP H1 ENCFF429RUE 147 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 112 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 261 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 240 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 224 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 383 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 603 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 340 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 189 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 173 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 458 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 225 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 231 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 390 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 216 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap
SMARCA4 4 datasets
ChIP MCF-7_shJUN GSE128445.SMARCA4.MCF-7_shJUN 187 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 165 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 206 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 196 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 264 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 268 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 688 bp overlap
SOX2 2 datasets
ChIP RENVM GSE49404.SOX2.RENVM 158 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 199 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 174 bp overlap
SREBP2 3 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 276 bp overlap
ChIP HCC70 GSE126380.SREBP2.HCC70 268 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 282 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 79 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 258 bp overlap
SUZ12 4 datasets
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 259 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 208 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 132 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 688 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 220 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 145 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 299 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 225 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 147 bp overlap
TET2 1 dataset
ChIP Jurkat_RUNX1KD GSE85524.TET2.Jurkat_RUNX1KD 154 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 294 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 285 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 222 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 166 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 323 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 228 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 298 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF281 3 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZSCAN4 1 dataset
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap