chr1 : 214,224,591 214,225,361
770 bp 119 TFs 0 linked genes
This 770 bp open chromatin element has no linked target genes and is bound by 119 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:214,219,591 – 214,230,361
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
119 transcription factors
Source
Cell type
AR 2 datasets
ChIP myofibroblast GSE90772.AR.myofibroblast 182 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 248 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 582 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 770 bp overlap
ATF3 1 dataset
ChIP WA01 ENCSR000BKC.ATF3.WA01 129 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 447 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 681 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 185 bp overlap
BRD3 1 dataset
ChIP U-87MG_GBM GSE99171.BRD3.U-87MG_GBM 184 bp overlap
BRD4 8 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 136 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 119 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 189 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 186 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 302 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 314 bp overlap
ChIP hESC GSE33281.BRD4.hESC 72 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 267 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 252 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 274 bp overlap
CEBPB 2 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 153 bp overlap
ChIP IMR-90 ENCFF468UGY 233 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 230 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 163 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 193 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 230 bp overlap
CTCF 7 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 481 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 255 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 561 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 177 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 343 bp overlap
ChIP uterus ENCSR684PGO.CTCF.uterus 165 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 698 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF346MCV 251 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 114 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 294 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 419 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 206 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 261 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 207 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 400 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 455 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 536 bp overlap
EP300 3 datasets
ChIP neural ENCSR843ZUP.EP300.neural 387 bp overlap
ChIP neural cell ENCFF442QNK 517 bp overlap
ChIP neural cell ENCFF442QNK 517 bp overlap
ESR1 7 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 95 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 294 bp overlap
ChIP breast-cancer_S176 GSE128018.ESR1.breast-cancer_S176 126 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 307 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 435 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_6 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_6 267 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 222 bp overlap
ETS1 5 datasets
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 185 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 189 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 222 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 187 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 194 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 386 bp overlap
ChIP WTC11 ENCFF812SCD 437 bp overlap
EZH2 1 dataset
ChIP H1 ENCFF232NZA 585 bp overlap
Ebf2 2 datasets
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 135 bp overlap
FOXA1 2 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 398 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 277 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 236 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_15 GSE104399.GATA3.breast_tumor_Male_15 233 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 244 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 88 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-2 299 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 358 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 359 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 389 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 493 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 391 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 289 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 275 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 236 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 645 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 255 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 636 bp overlap
Hic1 2 datasets
Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap
Motif ES_0h ES_0h-Hic1_MA0739.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 251 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 220 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 300 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 60 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 690 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 751 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 203 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 251 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE79899.KMT2A.MV4-11 57 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 220 bp overlap
MAX 8 datasets
ChIP H1 ENCFF601FOM 300 bp overlap
ChIP H1 ENCFF914VQY 267 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 109 bp overlap
ChIP K562 ENCFF524IJO 317 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 245 bp overlap
ChIP WTC11 ENCFF223QFY 453 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 122 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 194 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 312 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 504 bp overlap
MYC 7 datasets
ChIP BJ GSE36570.MYC.BJ 147 bp overlap
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 184 bp overlap
ChIP H1 ENCFF794ZJT 265 bp overlap
ChIP HFF_OHT GSE65544.MYC.HFF_OHT 183 bp overlap
ChIP U-87MG GSE36354.MYC.U-87MG 147 bp overlap
ChIP WA01 ENCSR000EBY.MYC.WA01 174 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLU.MYC.endothelial_umbilical-vein 126 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 683 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 351 bp overlap
ChIP IMR-90_alpha-amanitin-30min GSE118494.NCAPH2.IMR-90_alpha-amanitin-30min 255 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 212 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 74 bp overlap
NR3C1 2 datasets
ChIP breast_tumor_Male_15 GSE104399.NR3C1.breast_tumor_Male_15 219 bp overlap
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 244 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 770 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 212 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 285 bp overlap
PGR 1 dataset
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 308 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 244 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 247 bp overlap
POU4F2 2 datasets
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 170 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 316 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 409 bp overlap
RBBP5 4 datasets
ChIP H1 ENCFF905HFL 569 bp overlap
ChIP H1 ENCFF905HFL 634 bp overlap
ChIP H1 ENCFF905HFL 433 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 682 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 135 bp overlap
REST 2 datasets
ChIP WA01 ENCSR000BHM.REST.WA01 156 bp overlap
ChIP neural ENCSR000BTV.REST.neural 486 bp overlap
RNF2 4 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 394 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 770 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 326 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 761 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 201 bp overlap
Rhox11 2 datasets
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 397 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 225 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 144 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 289 bp overlap
SMARCB1 3 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 351 bp overlap
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 355 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 297 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 389 bp overlap
SOX2 2 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 190 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 268 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 176 bp overlap
SP1 3 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 130 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 3 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_7aa GSE139053.SS18-SSX.fibroblast_7aa 152 bp overlap
STAT3 1 dataset
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 135 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF881NFR 711 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 216 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 468 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 258 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 345 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 155 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 156 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 119 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 229 bp overlap
TP53 2 datasets
ChIP H9 GSE142050.TP53.H9 319 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 315 bp overlap
USF1 6 datasets
ChIP H1 ENCFF090WVU 117 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 98 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 132 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 153 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 255 bp overlap
ChIP WTC11 ENCFF699QGS 314 bp overlap
USF2 6 datasets
ChIP H1 ENCFF434EDF 239 bp overlap
ChIP IMR-90 ENCFF438KUN 252 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 215 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 114 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 175 bp overlap
ChIP WTC11 ENCFF139JAW 309 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 215 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 212 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 267 bp overlap
ZNF135 2 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 316 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF263 3 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 261 bp overlap
ChIP WTC11 ENCFF893RTM 437 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF331 2 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 160 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 120 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
ZNF816 2 datasets
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap