chr1 : 144,418,808 144,419,362
554 bp 135 TFs 2 linked genes
This 554 bp open chromatin element is linked to ENSG00000237343 and RNVU1-15 and is bound by 135 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000237343 at TSS At TSS Proximity
RNVU1-15 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:144,413,808 – 144,424,362
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
135 transcription factors
Source
Cell type
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 367 bp overlap
ATF3 2 datasets
ChIP K562 ENCFF965VXT 208 bp overlap
ChIP liver ENCFF867MFZ 302 bp overlap
BCL11B 1 dataset
ChIP HEK293 ENCFF859UHP 371 bp overlap
BDP1 2 datasets
ChIP HeLa-S3 ENCFF917HGQ 252 bp overlap
ChIP K562 ENCFF448WZN 261 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 153 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 161 bp overlap
CEBPB 10 datasets
ChIP A549 ENCFF235AIY 210 bp overlap
ChIP A549 ENCFF781RLJ 248 bp overlap
ChIP H1 ENCFF871PTR 242 bp overlap
ChIP HeLa-S3 ENCFF722WEG 99 bp overlap
ChIP HepG2 ENCFF074JWB 168 bp overlap
ChIP HepG2 ENCFF536NTI 199 bp overlap
ChIP IMR-90 ENCFF468UGY 198 bp overlap
ChIP K562 ENCFF189VBN 249 bp overlap
ChIP K562 ENCFF584CTB 394 bp overlap
ChIP MCF-7 ENCFF772ZTQ 155 bp overlap
CEBPD 1 dataset
ChIP HepG2 ENCFF345JDB 242 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 156 bp overlap
CHD1 1 dataset
ChIP MCF-7 ENCFF937PTG 401 bp overlap
CLOCK 3 datasets
ChIP MCF-7 ENCFF642OGE 411 bp overlap
ChIP MCF-7 ENCFF744CVK 401 bp overlap
ChIP MCF-7 ENCFF744CVK 373 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCFF867SAS 385 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCFF969VBY 394 bp overlap
CTCF 55 datasets
ChIP 22Rv1 ENCFF466OXN 287 bp overlap
ChIP AG09309 ENCFF478XPS 277 bp overlap
ChIP C4-2B ENCFF821XVN 393 bp overlap
ChIP GM23338 ENCFF531QOI 409 bp overlap
ChIP H9 ENCFF152GTF 250 bp overlap
ChIP HEK293 ENCFF821TIC 200 bp overlap
ChIP HFFc6 ENCFF005CJI 240 bp overlap
ChIP HepG2 ENCFF757EKU 351 bp overlap
ChIP LNCAP ENCFF700QXT 453 bp overlap
ChIP MCF 10A ENCFF988BGF 365 bp overlap
ChIP MCF-7 ENCFF162GNE 227 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 170 bp overlap
ChIP Peyer's patch ENCFF828IDE 341 bp overlap
ChIP RWPE1 ENCFF200GQF 505 bp overlap
ChIP RWPE2 ENCFF911IEE 403 bp overlap
ChIP SK-N-SH ENCFF575DMG 240 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 449 bp overlap
ChIP adrenal gland ENCFF678WUB 311 bp overlap
ChIP brain ENCFF163BBN 333 bp overlap
ChIP brain ENCFF685VRG 448 bp overlap
ChIP breast epithelium ENCFF080KNR 437 bp overlap
ChIP chondrocyte ENCFF134ORZ 476 bp overlap
ChIP endodermal cell ENCFF471YCZ 236 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 310 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 115 bp overlap
ChIP esophagus squamous epithelium ENCFF683HYK 351 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 217 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 161 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 436 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 203 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 164 bp overlap
ChIP gastroesophageal sphincter ENCFF582GAX 341 bp overlap
ChIP gastroesophageal sphincter ENCFF607YRA 218 bp overlap
ChIP gastroesophageal sphincter ENCFF918KPI 337 bp overlap
ChIP heart right ventricle ENCFF577TID 343 bp overlap
ChIP neural cell ENCFF335ADI 201 bp overlap
ChIP neural progenitor cell ENCFF420RBO 166 bp overlap
ChIP neural progenitor cell ENCFF581WPG 497 bp overlap
ChIP osteocyte ENCFF929FPD 372 bp overlap
ChIP prostate gland ENCFF655GBO 341 bp overlap
ChIP right lobe of liver ENCFF956UTA 377 bp overlap
ChIP spleen ENCFF077XIZ 393 bp overlap
ChIP spleen ENCFF878IYR 402 bp overlap
ChIP thyroid gland ENCFF204HWS 371 bp overlap
ChIP tibial nerve ENCFF665IWH 464 bp overlap
ChIP transverse colon ENCFF077CMZ 451 bp overlap
ChIP transverse colon ENCFF471AZS 394 bp overlap
ChIP transverse colon ENCFF471AZS 377 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 226 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 431 bp overlap
ChIP upper lobe of left lung ENCFF374MAK 411 bp overlap
ChIP upper lobe of left lung ENCFF645BXH 431 bp overlap
ChIP uterus ENCFF466ZUR 325 bp overlap
Cebpa 8 datasets
ChIP BLaER1 ENCFF031ISE 327 bp overlap
ChIP BLaER1 ENCFF093OYK 146 bp overlap
ChIP BLaER1 ENCFF093OYK 161 bp overlap
ChIP BLaER1 ENCFF274GAT 251 bp overlap
ChIP BLaER1 ENCFF335XTP 288 bp overlap
ChIP BLaER1 ENCFF364PUR 554 bp overlap
ChIP BLaER1 ENCFF460KDD 148 bp overlap
ChIP BLaER1 ENCFF896HSY 293 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 420 bp overlap
EHF 1 dataset
Motif DE_72h DE_72h-EHF_MA0598.4 9 bp overlap
ELF3 1 dataset
Motif DE_72h DE_72h-ELF3_MA0640.3 9 bp overlap
ERG 2 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 349 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 378 bp overlap
ESR1 1 dataset
ChIP MCF-7 ENCFF004AKH 361 bp overlap
ETV6 1 dataset
Motif DE_72h DE_72h-ETV6_MA0645.2 9 bp overlap
Elf5 1 dataset
Motif DE_72h DE_72h-Elf5_MA0136.4 8 bp overlap
FOSL2 1 dataset
ChIP MCF-7 ENCFF716UWP 233 bp overlap
GABPB1 2 datasets
ChIP HepG2 ENCFF315AWN 273 bp overlap
ChIP HepG2 ENCFF315AWN 181 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 124 bp overlap
GATA2 1 dataset
ChIP HepG2 ENCFF905PYM 242 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF352QVM 124 bp overlap
ChIP MCF-7 ENCFF437NQS 243 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 235 bp overlap
ChIP DE DE-GATA6-2 164 bp overlap
GATAD2B 1 dataset
ChIP MCF-7 ENCFF718AXM 341 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 457 bp overlap
ChIP HEK293 ENCFF299RSE 350 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCFF446EIF 299 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCFF252CFL 438 bp overlap
HMGXB4 4 datasets
ChIP HepG2 ENCFF032DND 554 bp overlap
ChIP HepG2 ENCFF179TAD 250 bp overlap
ChIP WTC11 ENCFF962POR 508 bp overlap
ChIP WTC11 ENCFF962POR 466 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 173 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 173 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 282 bp overlap
ChIP GM12878 ENCFF824TGK 554 bp overlap
IKZF2 3 datasets
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
ChIP GM12878 ENCFF238LYK 250 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCFF518OXG 351 bp overlap
KLF15 1 dataset
Motif DE_72h DE_72h-KLF15_MA1513.2 8 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCFF658MHR 394 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCFF929IAJ 411 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 468 bp overlap
MAF1 1 dataset
ChIP HepG2 ENCFF925PQA 300 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 534 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 506 bp overlap
MED1 1 dataset
ChIP HepG2 ENCFF495TSS 318 bp overlap
MYC 2 datasets
ChIP MCF-7 ENCFF394LGD 240 bp overlap
ChIP MCF-7 ENCFF542NWJ 305 bp overlap
Mafg 1 dataset
Motif DE_72h DE_72h-Mafg_MA0659.4 12 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 311 bp overlap
NR5A1 1 dataset
ChIP HepG2 ENCFF970YZO 262 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF689EWI 447 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 362 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 271 bp overlap
ChIP HEK293 ENCFF016MNJ 396 bp overlap
PHF8 1 dataset
ChIP A549 ENCFF815XUD 448 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 214 bp overlap
ChIP MCF-7 ENCFF116OCS 303 bp overlap
POLR2A 20 datasets
ChIP A549 ENCFF748RAW 273 bp overlap
ChIP GM12892 ENCFF506PGQ 423 bp overlap
ChIP HeLa-S3 ENCFF224LWS 368 bp overlap
ChIP HeLa-S3 ENCFF455YYQ 470 bp overlap
ChIP HeLa-S3 ENCFF773DNG 454 bp overlap
ChIP MCF-7 ENCFF164XWP 363 bp overlap
ChIP MCF-7 ENCFF309IKZ 127 bp overlap
ChIP MCF-7 ENCFF411WCU 185 bp overlap
ChIP body of pancreas ENCFF501FEC 554 bp overlap
ChIP breast epithelium ENCFF045XXN 349 bp overlap
ChIP breast epithelium ENCFF065JSZ 380 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 412 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 503 bp overlap
ChIP sigmoid colon ENCFF725QFT 319 bp overlap
ChIP sigmoid colon ENCFF748YVT 356 bp overlap
ChIP spleen ENCFF044PYR 303 bp overlap
ChIP spleen ENCFF446ZGT 344 bp overlap
ChIP spleen ENCFF706IUS 293 bp overlap
ChIP thyroid gland ENCFF979LRR 483 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 506 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 277 bp overlap
POLR3A 4 datasets
ChIP HeLa-S3 ENCFF777TAS 230 bp overlap
ChIP HeLa-S3 ENCFF777TAS 100 bp overlap
ChIP K562 ENCFF452GCM 240 bp overlap
ChIP K562 ENCFF452GCM 81 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 442 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 486 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 177 bp overlap
ChIP HEK293 ENCFF145WQQ 399 bp overlap
RBBP5 1 dataset
ChIP H1 ENCFF905HFL 550 bp overlap
RCOR1 2 datasets
ChIP MCF-7 ENCFF833PNP 361 bp overlap
ChIP MCF-7 ENCFF833PNP 326 bp overlap
REST 1 dataset
ChIP HEK293 ENCFF073DOT 431 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 254 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 440 bp overlap
SIN3A 3 datasets
ChIP A549 ENCFF752ATT 511 bp overlap
ChIP MCF-7 ENCFF437VFY 486 bp overlap
ChIP MCF-7 ENCFF437VFY 399 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 470 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 419 bp overlap
SP2 1 dataset
ChIP HEK293 ENCFF181QXT 403 bp overlap
SP3 1 dataset
ChIP HEK293 ENCFF087XLA 452 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 193 bp overlap
SREBF2 3 datasets
ChIP A549 ENCFF252BOY 295 bp overlap
ChIP GM12878 ENCFF670DYX 145 bp overlap
ChIP HeLa-S3 ENCFF787QBT 372 bp overlap
TARDBP 1 dataset
ChIP MCF-7 ENCFF924WTI 371 bp overlap
TBP 7 datasets
ChIP GM12878 ENCFF571OXR 285 bp overlap
ChIP H1 ENCFF859IIO 229 bp overlap
ChIP HeLa-S3 ENCFF715NNJ 205 bp overlap
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 186 bp overlap
ChIP Hep-G2 ENCSR000EEL.TBP.Hep-G2 131 bp overlap
ChIP HepG2 ENCFF023IVD 206 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 129 bp overlap
TEAD4 3 datasets
ChIP H1 ENCFF778PAX 212 bp overlap
ChIP MCF-7 ENCFF710WPA 271 bp overlap
ChIP SK-N-SH ENCFF754TJT 269 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 420 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCFF596XRL 371 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 362 bp overlap
TSC22D1 1 dataset
ChIP MCF-7 ENCFF552PAC 251 bp overlap
YY1 1 dataset
ChIP HEK293 ENCFF734SBY 391 bp overlap
ZBED4 1 dataset
Motif DE_72h DE_72h-ZBED4_MA2328.1 10 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 316 bp overlap
ChIP K562 ENCFF694AXU 317 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 554 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 460 bp overlap
ZBTB26 2 datasets
ChIP HEK293 ENCFF752POA 369 bp overlap
ChIP HEK293 ENCFF752TCU 192 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 250 bp overlap
ZBTB40 2 datasets
ChIP K562 ENCFF521DSV 251 bp overlap
ChIP MCF-7 ENCFF044DWL 124 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCFF809BPK 214 bp overlap
ZBTB6 1 dataset
ChIP HEK293 ENCFF881ECZ 242 bp overlap
ZBTB7B 1 dataset
ChIP MCF-7 ENCFF361BGF 401 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 554 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCFF007TAP 401 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCFF847JIE 483 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCFF968PWB 480 bp overlap
ZFP69B 1 dataset
ChIP HEK293 ENCFF942LFP 384 bp overlap
ZFX 5 datasets
ChIP HEK293T ENCFF402JZW 449 bp overlap
ChIP HEK293T ENCFF402JZW 264 bp overlap
ChIP HepG2 ENCFF016NZF 542 bp overlap
ChIP MCF-7 ENCFF009NAJ 554 bp overlap
ChIP MCF-7 ENCFF009NAJ 356 bp overlap
ZFY 1 dataset
ChIP HepG2 ENCFF106ELT 529 bp overlap
ZGPAT 1 dataset
ChIP HepG2 ENCFF055YSO 501 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCFF611ZJI 242 bp overlap
ZNF121 1 dataset
ChIP HEK293 ENCFF839FUF 441 bp overlap
ZNF16 1 dataset
ChIP HEK293 ENCFF231FLW 351 bp overlap
ZNF175 1 dataset
Motif DE_72h DE_72h-ZNF175_MA2332.1 9 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCFF066NGR 440 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCFF638TIB 248 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCFF641ICT 423 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCFF379OSU 490 bp overlap
ZNF24 5 datasets
ChIP GM12878 ENCFF688STO 311 bp overlap
ChIP HEK293 ENCFF308WOW 395 bp overlap
ChIP HepG2 ENCFF086UMQ 305 bp overlap
ChIP K562 ENCFF877JCX 209 bp overlap
ChIP MCF-7 ENCFF861XIL 195 bp overlap
ZNF324 1 dataset
ChIP HEK293 ENCFF062DPE 404 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 551 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCFF944VMC 445 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 224 bp overlap
ZNF394 1 dataset
ChIP HEK293 ENCFF236OPX 430 bp overlap
ZNF501 1 dataset
ChIP HEK293 ENCFF066RAQ 453 bp overlap
ZNF512B 1 dataset
ChIP MCF-7 ENCFF118ELW 341 bp overlap
ZNF558 1 dataset
ChIP HEK293 ENCFF994JWH 395 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCFF399XKF 441 bp overlap
ZNF579 1 dataset
ChIP MCF-7 ENCFF550XRS 429 bp overlap
ZNF580 1 dataset
ChIP HEK293 ENCFF906MQV 381 bp overlap
ZNF582 1 dataset
Motif DE_72h DE_72h-ZNF582_MA1983.2 19 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 463 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 133 bp overlap
ChIP HepG2 ENCFF490FFQ 273 bp overlap
ZNF639 1 dataset
ChIP HEK293 ENCFF971ZNH 402 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 427 bp overlap
ChIP MCF-7 ENCFF440BFX 437 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCFF040AZE 456 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCFF374TCG 451 bp overlap
ZNF837 1 dataset
ChIP HEK293 ENCFF961YOZ 325 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 ENCFF533NFT 361 bp overlap
ZSCAN21 1 dataset
ChIP HEK293 ENCFF582WUP 398 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCFF082YBI 337 bp overlap
ZSCAN4 1 dataset
ChIP HEK293 ENCFF381BKT 404 bp overlap
ZSCAN5A 1 dataset
ChIP HEK293 ENCFF610EME 361 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 132 bp overlap