chr6 : 118,993,752 118,994,494
742 bp 119 TFs 4 linked genes
This 742 bp open chromatin element is linked to 4 target genes and is bound by 119 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
FAM184A 19.5 kb Distal Multiome
ENSG00000253194 59.3 kb Distal Multiome
MCM9 99.8 kb Distal Multiome
ASF1A 99.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:118,988,752 – 118,999,494
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
119 transcription factors
Source
Cell type
ATF3 2 datasets
ChIP liver ENCSR480LIS.ATF3.liver 219 bp overlap
ChIP liver ENCSR205FOW.ATF3.liver 249 bp overlap
Ahr::Arnt 2 datasets
Motif DE_48h DE_48h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 240 bp overlap
CEBPB 1 dataset
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 117 bp overlap
CHD4 1 dataset
ChIP macrophage GSE136216.CHD4.macrophage 230 bp overlap
CREB1 3 datasets
Motif DE_48h DE_48h-CREB1_MA0018.5 8 bp overlap
Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap
Motif DE_72h DE_72h-CREB1_MA0018.5 8 bp overlap
CTCF 1 dataset
ChIP hepatocyte ERP000395.CTCF.hepatocyte 124 bp overlap
DMRTA2 2 datasets
Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 601 bp overlap
EBF1 3 datasets
Motif DE_48h DE_48h-EBF1_MA0154.5 11 bp overlap
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
Motif DE_72h DE_72h-EBF1_MA0154.5 11 bp overlap
EGR1 1 dataset
ChIP liver ENCFF130MBW 401 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 503 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 211 bp overlap
ESR1 4 datasets
Motif DE_48h DE_48h-ESR1_MA0112.4 15 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 271 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 339 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 280 bp overlap
ETV6 2 datasets
ChIP GM12878 GSE97661.ETV6.GM12878 147 bp overlap
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 228 bp overlap
EWSR1-FLI1 3 datasets
Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_72h DE_72h-EWSR1-FLI1_MA0149.1 18 bp overlap
Ebf4 3 datasets
Motif DE_48h DE_48h-Ebf4_MA2122.1 11 bp overlap
Motif DE_60h DE_60h-Ebf4_MA2122.1 11 bp overlap
Motif DE_72h DE_72h-Ebf4_MA2122.1 11 bp overlap
FOXA1 4 datasets
Motif DE_36h DE_36h-FOXA1_MA0148.5 8 bp overlap
ChIP liver ERP002306.FOXA1.liver 468 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 141 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 270 bp overlap
FOXA2 6 datasets
ChIP DE DE-FOXA2-1 612 bp overlap
ChIP DE DE-FOXA2-2 683 bp overlap
Motif DE_36h DE_36h-FOXA2_MA0047.4 8 bp overlap
ChIP liver ENCFF877SFI 282 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 183 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 147 bp overlap
FOXA3 1 dataset
Motif DE_36h DE_36h-FOXA3_MA1683.2 7 bp overlap
FOXD1 1 dataset
Motif DE_36h DE_36h-FOXD1_MA0031.2 7 bp overlap
FOXF2 1 dataset
Motif DE_36h DE_36h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_36h DE_36h-FOXG1_MA0613.1 8 bp overlap
FOXH1 3 datasets
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
FOXI1 1 dataset
Motif DE_36h DE_36h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_36h DE_36h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_36h DE_36h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_36h DE_36h-FOXL1_MA0033.2 7 bp overlap
FOXN3 5 datasets
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
Motif DE_72h DE_72h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_36h DE_36h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_36h DE_36h-FOXO6_MA0849.1 7 bp overlap
FOXP1 2 datasets
Motif DE_36h DE_36h-FOXP1_MA0481.4 7 bp overlap
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 224 bp overlap
FOXP2 1 dataset
Motif DE_36h DE_36h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_36h DE_36h-FOXP3_MA0850.1 7 bp overlap
FOXP4 2 datasets
Motif DE_36h DE_36h-FOXP4_MA2117.1 7 bp overlap
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 149 bp overlap
FOXS1 1 dataset
Motif DE_36h DE_36h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_36h DE_36h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_36h DE_36h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_36h DE_36h-Foxj3_MA0851.2 9 bp overlap
Foxo1 1 dataset
Motif DE_36h DE_36h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_36h DE_36h-Foxo3_MA0157.4 7 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 574 bp overlap
ChIP DE DE-GATA4-2 564 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 648 bp overlap
ChIP DE DE-GATA6-2 542 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 375 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 374 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 395 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 441 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 634 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 549 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 401 bp overlap
GFI1 1 dataset
ChIP Hep-G2 ENCSR849FVL.GFI1.Hep-G2 275 bp overlap
HNF1A 2 datasets
ChIP HEE_5 GSE76376.HNF1A.HEE_5 194 bp overlap
ChIP NY15 GSE108150.HNF1A.NY15 126 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 85 bp overlap
HNF4A 6 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 164 bp overlap
ChIP liver ENCFF354NRH 277 bp overlap
ChIP liver ENCFF354NRH 305 bp overlap
ChIP liver ENCFF449HPV 227 bp overlap
ChIP liver ENCFF449HPV 115 bp overlap
ChIP liver ERP002306.HNF4A.liver 520 bp overlap
HNF4G 1 dataset
ChIP HepG2 ENCFF323ATZ 291 bp overlap
HNRNPUL1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPUL1.Hep-G2 66 bp overlap
ChIP HepG2 ENCFF150IKP 96 bp overlap
IKZF2 6 datasets
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
JUND 3 datasets
ChIP liver ENCFF007WWT 345 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 171 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 177 bp overlap
MEIS1 3 datasets
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MTF1 4 datasets
Motif DE_36h DE_36h-MTF1_MA0863.1 14 bp overlap
Motif DE_48h DE_48h-MTF1_MA0863.1 14 bp overlap
Motif DE_60h DE_60h-MTF1_MA0863.1 14 bp overlap
Motif DE_72h DE_72h-MTF1_MA0863.1 14 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 162 bp overlap
MXI1 2 datasets
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
MYB 1 dataset
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 240 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 191 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 208 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 253 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 317 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 391 bp overlap
NFIC 1 dataset
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 530 bp overlap
NR1H2::RXRA 4 datasets
Motif DE_36h DE_36h-NR1H2RXRA_MA0115.1 17 bp overlap
Motif DE_48h DE_48h-NR1H2RXRA_MA0115.1 17 bp overlap
Motif DE_60h DE_60h-NR1H2RXRA_MA0115.1 17 bp overlap
Motif DE_72h DE_72h-NR1H2RXRA_MA0115.1 17 bp overlap
NR3C1 1 dataset
ChIP HeLa-B2_GRKD_TA_TNFA GSE24518.NR3C1.HeLa-B2_GRKD_TA_TNFA 99 bp overlap
Nr2f6 1 dataset
Motif DE_48h DE_48h-Nr2f6_MA0677.2 13 bp overlap
PAX6 2 datasets
Motif DE_36h DE_36h-PAX6_MA0069.1 14 bp overlap
Motif DE_48h DE_48h-PAX6_MA0069.1 14 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 97 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 136 bp overlap
PPARG 1 dataset
Motif DE_48h DE_48h-PPARG_MA0066.2 19 bp overlap
PRDM9 3 datasets
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
PROX1 2 datasets
Motif DE_36h DE_36h-PROX1_MA0794.1 12 bp overlap
Motif DE_48h DE_48h-PROX1_MA0794.1 12 bp overlap
Prdm14 2 datasets
Motif DE_36h DE_36h-Prdm14_MA1998.2 8 bp overlap
Motif DE_48h DE_48h-Prdm14_MA1998.2 8 bp overlap
RAD21 3 datasets
ChIP liver ENCFF485PAC 372 bp overlap
ChIP liver ENCFF485PAC 457 bp overlap
ChIP liver ENCFF522JHE 348 bp overlap
REST 5 datasets
ChIP liver ENCFF240FWT 419 bp overlap
ChIP liver ENCFF577AZT 317 bp overlap
ChIP liver ENCFF577AZT 537 bp overlap
ChIP liver ENCSR867WPH.REST.liver 468 bp overlap
ChIP liver ENCSR893QWP.REST.liver 199 bp overlap
RORA 1 dataset
Motif DE_48h DE_48h-RORA_MA0072.2 11 bp overlap
RXRA 4 datasets
ChIP liver ENCFF077DAP 210 bp overlap
ChIP liver ENCFF077DAP 465 bp overlap
ChIP liver ENCFF807CIA 284 bp overlap
ChIP liver ENCFF807CIA 147 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 611 bp overlap
SP1 3 datasets
ChIP liver ENCFF597LFJ 559 bp overlap
ChIP liver ENCFF769YSM 238 bp overlap
ChIP liver ENCFF769YSM 511 bp overlap
SP5 3 datasets
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 105 bp overlap
SREBF1 2 datasets
Motif DE_48h DE_48h-SREBF1_MA0595.1 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0595.1 10 bp overlap
SREBF2 2 datasets
Motif DE_48h DE_48h-SREBF2_MA0596.1 10 bp overlap
Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap
SRF 2 datasets
ChIP Ishikawa ENCFF992QXM 305 bp overlap
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 217 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TBR1 1 dataset
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
TBX1 3 datasets
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
Motif DE_72h DE_72h-TBX1_MA0805.1 8 bp overlap
TBX15 3 datasets
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
Motif DE_72h DE_72h-TBX15_MA0803.1 8 bp overlap
TBX2 5 datasets
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
Motif DE_72h DE_72h-TBX2_MA0688.2 9 bp overlap
ChIP HepG2 ENCFF811TLA 621 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TBX21 3 datasets
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
Motif DE_72h DE_72h-TBX21_MA0690.3 10 bp overlap
TBX3 4 datasets
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
Motif DE_72h DE_72h-TBX3_MA1566.3 9 bp overlap
TBX4 3 datasets
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
Motif DE_72h DE_72h-TBX4_MA0806.1 8 bp overlap
TBX5 3 datasets
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
Motif DE_72h DE_72h-TBX5_MA0807.1 8 bp overlap
TFAP2A 3 datasets
Motif DE_48h DE_48h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_72h DE_72h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 3 datasets
Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_72h DE_72h-TFAP2C_MA0814.3 9 bp overlap
Tbx6 1 dataset
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 482 bp overlap
ZBED4 4 datasets
Motif DE_36h DE_36h-ZBED4_MA2328.1 10 bp overlap
Motif DE_48h DE_48h-ZBED4_MA2328.1 10 bp overlap
Motif DE_60h DE_60h-ZBED4_MA2328.1 10 bp overlap
Motif DE_72h DE_72h-ZBED4_MA2328.1 10 bp overlap
ZBTB26 3 datasets
Motif DE_48h DE_48h-ZBTB26_MA1579.2 8 bp overlap
Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap
Motif DE_72h DE_72h-ZBTB26_MA1579.2 8 bp overlap
ZBTB33 4 datasets
ChIP liver ENCFF592BJA 363 bp overlap
ChIP liver ENCFF592BJA 521 bp overlap
ChIP liver ENCSR516HUP.ZBTB33.liver 205 bp overlap
ChIP liver ENCSR516HUP.ZBTB33.liver 210 bp overlap
ZEB1 1 dataset
ChIP Hep-G2 ENCSR000BVN.ZEB1.Hep-G2 190 bp overlap
ZNF189 4 datasets
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
Motif DE_60h DE_60h-ZNF189_MA1725.2 9 bp overlap
Motif DE_72h DE_72h-ZNF189_MA1725.2 9 bp overlap
ZNF257 3 datasets
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
Motif DE_72h DE_72h-ZNF257_MA1710.2 10 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 74 bp overlap
ZNF331 4 datasets
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
Motif DE_48h DE_48h-ZNF331_MA1726.2 10 bp overlap
Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap
Motif DE_72h DE_72h-ZNF331_MA1726.2 10 bp overlap
ZNF341 4 datasets
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
Motif DE_60h DE_60h-ZNF341_MA1655.2 8 bp overlap
Motif DE_72h DE_72h-ZNF341_MA1655.2 8 bp overlap
ZNF528 1 dataset
Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap
ZNF677 4 datasets
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
Motif DE_72h DE_72h-ZNF677_MA2101.1 12 bp overlap
ZNF8 1 dataset
Motif DE_36h DE_36h-ZNF8_MA1718.1 20 bp overlap
ZSCAN16 3 datasets
Motif DE_48h DE_48h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_72h DE_72h-ZSCAN16_MA2100.1 18 bp overlap
ZSCAN4 4 datasets
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_72h DE_72h-ZSCAN4_MA1155.1 15 bp overlap