chr5 : 1,724,978 – 1,725,684
706 bp 123 TFs 1 linked gene
This 706 bp open chromatin element is linked to ENSG00000260066 and is bound by 123 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000260066 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:1,719,978 – 1,730,684
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
123 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 284 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 287 bp overlap
ChIP H1 ENCFF399KAM 64 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 676 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 581 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 394 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 575 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 706 bp overlap
BRD4 7 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 209 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 358 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 50 bp overlap
ChIP hESC GSE33281.BRD4.hESC 94 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 706 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 529 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 146 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 228 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
E2F6 7 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 158 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 153 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 373 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 269 bp overlap
ChIP K562 ENCFF136LTS 123 bp overlap
ChIP K562 ENCFF136LTS 212 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 706 bp overlap
ERF::NHLH1 1 dataset
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
ERG 1 dataset
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 265 bp overlap
ESR1 14 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 210 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 347 bp overlap
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 129 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 180 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 304 bp overlap
ChIP MDA-MB-134-VI_FI GSE109103.ESR1.MDA-MB-134-VI_FI 263 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 238 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 366 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 390 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 359 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 315 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 246 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 398 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 235 bp overlap
ETS1 1 dataset
ChIP K-562 ENCSR000BKQ.ETS1.K-562 129 bp overlap
EZH2 8 datasets
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 433 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 165 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 706 bp overlap
ChIP PC-9 ENCFF634ONR 405 bp overlap
ChIP T98G GSE112240.EZH2.T98G 396 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 404 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 491 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 69 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 308 bp overlap
GABPA 2 datasets
ChIP WA01 ENCSR000BIW.GABPA.WA01 151 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 145 bp overlap
GLIS3 2 datasets
ChIP H9_plus GSE109562.GLIS3.H9_plus 382 bp overlap
ChIP H9_plus GSE109562.GLIS3.H9_plus 125 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 358 bp overlap
ChIP H1 ENCFF353UJQ 155 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 243 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 246 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 326 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNRNPLL 1 dataset
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 193 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 327 bp overlap
IRF4 1 dataset
ChIP U266 GSE142493.IRF4.U266 205 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 153 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 650 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 706 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 517 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 230 bp overlap
KLF1 4 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
ChIP HEK293 ENCFF159QSW 437 bp overlap
ChIP HEK293 ENCFF159QSW 279 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 357 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 236 bp overlap
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KMT2A 1 dataset
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 173 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 613 bp overlap
ChIP K562 ENCFF320EQC 348 bp overlap
MAF 2 datasets
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 390 bp overlap
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 207 bp overlap
MAX 8 datasets
ChIP H1 ENCFF914VQY 232 bp overlap
ChIP H1 ENCFF914VQY 134 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 202 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 150 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 186 bp overlap
ChIP K562 ENCFF524IJO 397 bp overlap
ChIP K562 ENCFF524IJO 397 bp overlap
ChIP WTC11 ENCFF223QFY 526 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 262 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 592 bp overlap
ChIP K562 ENCFF140CEX 179 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 180 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 150 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 397 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 184 bp overlap
MYC 1 dataset
ChIP P493-6_0HR GSE125863.MYC.P493-6_0HR 199 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 249 bp overlap
NCBP1 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NCBP1.DLD-1_NELFCD-AID 296 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 682 bp overlap
NELFE 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.NELFE.DLD-1_NELFCD-AID 540 bp overlap
ChIP K-562_HS GSE112379.NELFE.K-562_HS 335 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 227 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 96 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 177 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 245 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 290 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
NRF1 3 datasets
ChIP K-562 ENCSR494TDU.NRF1.K-562 375 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 350 bp overlap
ChIP K562 ENCFF791UHF 482 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 433 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 381 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PCBP1 3 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 400 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 372 bp overlap
ChIP K-562 ENCSR052PTN.PCBP1.K-562 190 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 187 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 311 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 222 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 356 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 260 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 216 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 394 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 407 bp overlap
ChIP K562 ENCFF740YLK 220 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 226 bp overlap
RAD21 1 dataset
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 86 bp overlap
RB1 1 dataset
ChIP K-562 ENCSR670JDQ.RB1.K-562 173 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 154 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 308 bp overlap
RBFOX2 5 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 631 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 452 bp overlap
ChIP K562 ENCFF196WTG 672 bp overlap
ChIP K562 ENCFF967GRF 672 bp overlap
ChIP K562 ENCFF967GRF 607 bp overlap
RNF2 2 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 194 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 612 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 479 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 431 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 706 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 245 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 154 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 230 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 454 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 221 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 4 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
ChIP H1 ENCFF473YOB 449 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 437 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SPI1 1 dataset
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 138 bp overlap
SREBF1 1 dataset
ChIP K-562 ENCSR815ZDS.SREBF1.K-562 137 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 458 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 83 bp overlap
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 365 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 651 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 673 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 706 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 212 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TAF1 2 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 156 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 530 bp overlap
TAF15 1 dataset
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 263 bp overlap
TAF2 1 dataset
ChIP hESC GSE17917.TAF2.hESC 115 bp overlap
TBP 3 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 196 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 110 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 127 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1575.2 17 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 241 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 706 bp overlap
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 499 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 393 bp overlap
ZBTB7A 1 dataset
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 186 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 131 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZFX 3 datasets
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 706 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 331 bp overlap
ChIP K562 ENCFF536AJO 656 bp overlap
ZFY 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZFY.HEK293T_22Rv1 381 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 483 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 357 bp overlap
ZNF263 3 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 230 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 222 bp overlap
ZNF331 3 datasets
ChIP GM23338 ENCFF410NSZ 225 bp overlap
ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 308 bp overlap
ChIP HepG2 ENCFF842SZN 371 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 152 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF572 1 dataset
ChIP Hep-G2 ENCSR663CTC.ZNF572.Hep-G2 227 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 157 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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