chr13 : 95,533,627 – 95,534,061
434 bp 119 TFs 1 linked gene
This 434 bp open chromatin element is linked to CLDN10-AS1 and is bound by 119 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CLDN10-AS1 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:95,528,627 – 95,539,061
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
119 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 316 bp overlap
ARID1A 3 datasets
ChIP RMG-I GSE120058.ARID1A.RMG-I 379 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 298 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 229 bp overlap
ARID3A 1 dataset
ChIP Hep-G2 ENCSR000EDP.ARID3A.Hep-G2 96 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 332 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 417 bp overlap
ARNT::HIF1A 1 dataset
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 434 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 388 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1470.2 19 bp overlap
BRD4 2 datasets
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 308 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 147 bp overlap
CDK9 1 dataset
ChIP A-375_DMSO GSE57431.CDK9.A-375_DMSO 151 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 186 bp overlap
CTCF 3 datasets
ChIP GM23338 ENCFF531QOI 284 bp overlap
ChIP GM23338 ENCFF772DML 186 bp overlap
ChIP endodermal cell ENCFF471YCZ 329 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 82 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 249 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ERG 6 datasets
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 207 bp overlap
ChIP aortic-endothelial-cell_D19 GSE139377.ERG.aortic-endothelial-cell_D19 159 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 215 bp overlap
ChIP aortic-endothelial-cell_D26 GSE139377.ERG.aortic-endothelial-cell_D26 123 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 196 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 202 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 93 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 151 bp overlap
ESRRA 1 dataset
Motif DE_24h DE_24h-ESRRA_MA0592.4 9 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 174 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 122 bp overlap
Esrrg 1 dataset
Motif DE_24h DE_24h-Esrrg_MA0643.2 9 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 346 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 261 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 131 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 120 bp overlap
GATA2 3 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 242 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 303 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 220 bp overlap
GATA3 1 dataset
ChIP T47D-A1-2_EtOH GSE112491.GATA3.T47D-A1-2_EtOH 68 bp overlap
GATA6 1 dataset
ChIP OACP4-C GSE132680.GATA6.OACP4-C 256 bp overlap
HNF4A 5 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 184 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 156 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 140 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 359 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 434 bp overlap
HNF4G 1 dataset
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 180 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 301 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 159 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 167 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 170 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 143 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 209 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 239 bp overlap
MSANTD3 1 dataset
Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 224 bp overlap
MYCN 1 dataset
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 107 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 182 bp overlap
NFIA 1 dataset
Motif DE_24h DE_24h-NFIA_MA0670.2 6 bp overlap
NFIC 1 dataset
Motif DE_24h DE_24h-NFIC_MA0161.3 7 bp overlap
NFIX 1 dataset
Motif DE_24h DE_24h-NFIX_MA0671.2 6 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 225 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 179 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
NR2F2 1 dataset
Motif DE_24h DE_24h-NR2F2_MA1111.2 7 bp overlap
NR2F6 1 dataset
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 163 bp overlap
NR4A1 1 dataset
Motif DE_24h DE_24h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_24h DE_24h-NR4A2_MA0160.3 8 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 231 bp overlap
Nr2f6 1 dataset
Motif DE_24h DE_24h-Nr2f6_MA0677.2 13 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 241 bp overlap
POLR2A 3 datasets
ChIP H1 ENCFF833NJP 376 bp overlap
ChIP body of pancreas ENCFF501FEC 216 bp overlap
ChIP body of pancreas ENCFF727UBE 362 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU4F3 1 dataset
Motif DE_24h DE_24h-POU4F3_MA0791.2 12 bp overlap
PPARA::RXRA 1 dataset
Motif DE_24h DE_24h-PPARARXRA_MA1148.2 17 bp overlap
PPARG 3 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 357 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 355 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 145 bp overlap
PRDM14 1 dataset
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 233 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Ppara 1 dataset
Motif DE_24h DE_24h-Ppara_MA2338.1 7 bp overlap
Pparg::Rxra 2 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_24h DE_24h-PpargRxra_MA0065.3 13 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 229 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 146 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 145 bp overlap
RELA 16 datasets
ChIP HAEC GSE89970.RELA.HAEC 154 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 234 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 182 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 193 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 273 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 189 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 227 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 187 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 140 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 281 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 226 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 213 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 283 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 171 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 192 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 199 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD3 2 datasets
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 145 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 107 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 378 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 114 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP1 3 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 3 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 3 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 130 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 242 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 347 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 362 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA1-mut GSE113909.TCF7.breast-organoid_BRCA1-mut 272 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
WDR5 1 dataset
ChIP breast-cancer_shLuc GSE113279.WDR5.breast-cancer_shLuc 434 bp overlap
YY1 4 datasets
ChIP GM12892 ENCSR000BLT.YY1.GM12892 108 bp overlap
ChIP H1 ENCFF524BTL 312 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 97 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 247 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 191 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 214 bp overlap
ZBTB32 2 datasets
Motif DE_12h DE_12h-ZBTB32_MA1580.1 10 bp overlap
Motif DE_12h DE_12h-ZBTB32_MA1580.1 10 bp overlap
ZBTB7A 1 dataset
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 93 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 277 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF16 1 dataset
Motif DE_24h DE_24h-ZNF16_MA1654.2 21 bp overlap
ZNF217 1 dataset
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 349 bp overlap
ZNF263 2 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 233 bp overlap
ZNF680 1 dataset
Motif DE_24h DE_24h-ZNF680_MA1729.2 11 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
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