chr12 : 110,000,274 110,000,558
284 bp 111 TFs 3 linked genes
This 284 bp open chromatin element is linked to ANKRD13A, ENSG00000280426, and GIT2 and is bound by 111 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ANKRD13A 845 bp At TSS Proximity
ENSG00000280426 1.1 kb Proximal Proximity
GIT2 3.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:109,995,274 – 110,005,558
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 124 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 116 bp overlap
ChIP HepG2 ENCFF317ZHO 284 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 87 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 170 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 269 bp overlap
BCL6 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 265 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 144 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 193 bp overlap
BCOR 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 162 bp overlap
ChIP K-562 ENCSR808AKZ.BCOR.K-562 86 bp overlap
BORCS8,MEF2B 1 dataset
ChIP HepG2 ENCFF255VGS 186 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 284 bp overlap
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 116 bp overlap
BRD4 3 datasets
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 284 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 161 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 131 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 265 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 199 bp overlap
CHD4 1 dataset
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 51 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 159 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 249 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 238 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 117 bp overlap
E2F6 1 dataset
ChIP K562 ENCFF136LTS 54 bp overlap
EBF1 6 datasets
ChIP GM12878 ENCFF167CZS 284 bp overlap
ChIP GM12878 ENCFF813OXE 89 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 177 bp overlap
ChIP LCL GSE75503.EBF1.LCL 284 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 284 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 280 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 130 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 157 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 68 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 284 bp overlap
ESR1 3 datasets
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 58 bp overlap
ChIP T-47D ENCSR000BQD.ESR1.T-47D 116 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 179 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 119 bp overlap
ESRRA 6 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 269 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 170 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 271 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 88 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 107 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 118 bp overlap
ETS1 2 datasets
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 55 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 55 bp overlap
EZH2 7 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 112 bp overlap
ChIP GM23338 ENCFF613YON 146 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 270 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 73 bp overlap
ChIP neural progenitor cell ENCFF472NFV 284 bp overlap
ChIP neural progenitor cell ENCFF472NFV 284 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 206 bp overlap
FBXL19 1 dataset
ChIP HepG2 ENCFF127ONN 276 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 126 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 237 bp overlap
ChIP DE DE-FOXA2-2 273 bp overlap
FOXK1 1 dataset
ChIP K562 ENCFF801IBC 157 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 284 bp overlap
ChIP DE DE-GATA4-2 284 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 284 bp overlap
ChIP DE DE-GATA6-2 284 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 284 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 284 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 284 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 284 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 284 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 284 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 284 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 141 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 174 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 139 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 263 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 284 bp overlap
ChIP K562 ENCFF744ALD 284 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B GSE145834.HIF1A.BEAS-2B 59 bp overlap
HMGXB4 2 datasets
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 59 bp overlap
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 110 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 60 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 75 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 162 bp overlap
IKZF5 1 dataset
ChIP HepG2 ENCFF641EBK 97 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 242 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 113 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 260 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 267 bp overlap
KDM1A 4 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 279 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 203 bp overlap
ChIP K562 ENCFF128TYE 284 bp overlap
ChIP K562 ENCFF133OLU 284 bp overlap
KDM2A 1 dataset
ChIP HepG2 ENCFF491GTR 128 bp overlap
KMT2A 8 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 74 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 189 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 276 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 93 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 120 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 91 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 248 bp overlap
ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 83 bp overlap
KMT2B 1 dataset
ChIP HepG2 ENCFF675TEK 125 bp overlap
LCOR 1 dataset
ChIP HepG2 ENCFF499KCU 51 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 71 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 243 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 233 bp overlap
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 74 bp overlap
MEF2B 2 datasets
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 284 bp overlap
ChIP tonsil GSE110682.MEF2B.tonsil 284 bp overlap
MEN1 2 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 248 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 284 bp overlap
MGA 2 datasets
ChIP HepG2 ENCFF057YJE 282 bp overlap
ChIP HepG2 ENCFF057YJE 284 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 284 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 83 bp overlap
MYBL2 2 datasets
ChIP A-673 GSE119971.MYBL2.A-673 179 bp overlap
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 184 bp overlap
MYC 2 datasets
ChIP MCF-7 ENCFF542NWJ 140 bp overlap
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 89 bp overlap
MYCN 1 dataset
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 79 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 71 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF674RQA 277 bp overlap
NR5A1 2 datasets
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 83 bp overlap
ChIP HepG2 ENCFF970YZO 188 bp overlap
NR5A2 2 datasets
ChIP A-549 ENCSR190GIW.NR5A2.A-549 129 bp overlap
ChIP A549 ENCFF834RVE 176 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 125 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 192 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 93 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 92 bp overlap
POLR2A 10 datasets
ChIP GM12892 ENCFF506PGQ 284 bp overlap
ChIP Raji ENCFF613VGX 268 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 189 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 165 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 64 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 271 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 126 bp overlap
ChIP spleen ENCFF044PYR 197 bp overlap
ChIP transverse colon ENCFF610RWV 128 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 284 bp overlap
RAD21 2 datasets
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 104 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.RAD21.peripheral-blood-neutrophil_US-1 242 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 76 bp overlap
RCOR2 1 dataset
ChIP HepG2 ENCFF310RFX 219 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 98 bp overlap
REPIN1 2 datasets
ChIP HepG2 ENCFF598VSY 108 bp overlap
ChIP HepG2 ENCFF598VSY 284 bp overlap
REST 2 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 58 bp overlap
ChIP neural ENCSR000BTV.REST.neural 172 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 148 bp overlap
SIN3A 2 datasets
ChIP K562 ENCFF397YHR 85 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 86 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 284 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 187 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 284 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 255 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 170 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 186 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 284 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 232 bp overlap
SMARCA4 7 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 140 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 216 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 57 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 67 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 250 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 180 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 211 bp overlap
SMC1 2 datasets
ChIP HCAEC GSE101921.SMC1.HCAEC 190 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 63 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 90 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 284 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 69 bp overlap
SUZ12 6 datasets
ChIP H1 ENCFF881NFR 244 bp overlap
ChIP H1 ENCFF881NFR 284 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 120 bp overlap
ChIP NT2/D1 ENCFF574SXS 241 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 217 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 129 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 176 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 158 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 244 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 160 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 170 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 146 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 80 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 80 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 61 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 146 bp overlap
ChIP liver ENCFF400MBC 230 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 161 bp overlap
ZBTB40 2 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 284 bp overlap
ChIP K562 ENCFF521DSV 234 bp overlap
ZFP91 1 dataset
ChIP K562 ENCFF501CDP 284 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 151 bp overlap
ZNF221 1 dataset
ChIP HepG2 ENCFF374BUN 212 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR099NCH.ZNF24.K-562 186 bp overlap
ZNF3 1 dataset
ChIP K562 ENCFF233AOY 116 bp overlap
ZNF430 1 dataset
ChIP HepG2 ENCFF967HQR 196 bp overlap
ZNF677 1 dataset
ChIP HEK293 ENCFF220HCQ 94 bp overlap
ZNF697 1 dataset
ChIP HepG2 ENCFF153LJW 60 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 81 bp overlap
ZNF772 2 datasets
ChIP HepG2 ENCFF728OGE 180 bp overlap
ChIP HepG2 ENCFF728OGE 284 bp overlap