chr12 : 102,834,182 – 102,834,360
178 bp 111 TFs 1 linked gene
This 178 bp open chromatin element is linked to LINC00485 and is bound by 111 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC00485 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:102,829,182 – 102,839,360
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 178 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 138 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 113 bp overlap
CEBPA 3 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 55 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 72 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 81 bp overlap
DLX6 1 dataset
ChIP Hep-G2 ENCSR272TOJ.DLX6.Hep-G2 162 bp overlap
DNMT3B 2 datasets
ChIP Hep-G2 ENCSR156CWW.DNMT3B.Hep-G2 134 bp overlap
ChIP Hep-G2 ENCSR283OLA.DNMT3B.Hep-G2 122 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 143 bp overlap
E2F1 1 dataset
ChIP Hep-G2 ENCSR717ZZW.E2F1.Hep-G2 120 bp overlap
E2F4 1 dataset
ChIP Hep-G2 ENCSR924LSO.E2F4.Hep-G2 134 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 145 bp overlap
EHMT2 3 datasets
ChIP A-549 ENCSR321BJQ.EHMT2.A-549 146 bp overlap
ChIP K-562 ENCSR175EOM.EHMT2.K-562 149 bp overlap
ChIP K562 ENCFF053BWO 176 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 146 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 97 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 97 bp overlap
FEZF2 2 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOSL2 2 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 120 bp overlap
ChIP HepG2 ENCFF796NIA 166 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 150 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 108 bp overlap
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 121 bp overlap
GCM1 2 datasets
Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap
Motif ES_0h ES_0h-GCM1_MA0646.2 10 bp overlap
GCM2 2 datasets
Motif DE_12h DE_12h-GCM2_MA0767.2 8 bp overlap
Motif ES_0h ES_0h-GCM2_MA0767.2 8 bp overlap
HBP1 2 datasets
ChIP Hep-G2 ENCSR616WEG.HBP1.Hep-G2 124 bp overlap
ChIP HepG2 ENCFF512UDH 178 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 125 bp overlap
ChIP HepG2 ENCFF854JLR 100 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 178 bp overlap
HMGXB4 1 dataset
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 144 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 120 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 178 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 112 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 59 bp overlap
JUND 1 dataset
ChIP liver ENCSR196HGZ.JUND.liver 126 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 97 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 172 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 123 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 178 bp overlap
MBD1 1 dataset
ChIP Hep-G2 ENCSR260UJI.MBD1.Hep-G2 132 bp overlap
MED1 1 dataset
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 157 bp overlap
MEF2A 1 dataset
ChIP Hep-G2 ENCSR291MJH.MEF2A.Hep-G2 146 bp overlap
MEIS2 1 dataset
ChIP HepG2 ENCFF157BEH 178 bp overlap
MIER1 1 dataset
ChIP K-562 ENCSR426MDV.MIER1.K-562 178 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 178 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 131 bp overlap
MXI1 1 dataset
ChIP H1 ENCFF963FZS 178 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 128 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 169 bp overlap
NCOA2 1 dataset
ChIP HepG2 ENCFF853BJJ 178 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 136 bp overlap
NFKBIZ 1 dataset
ChIP Hep-G2 ENCSR235OVI.NFKBIZ.Hep-G2 166 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 169 bp overlap
ONECUT1 1 dataset
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 134 bp overlap
ONECUT2 1 dataset
ChIP Hep-G2 ENCSR661PKJ.ONECUT2.Hep-G2 148 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 124 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 162 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 178 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 166 bp overlap
ChIP HepG2 ENCFF508UTS 144 bp overlap
PRDM10 1 dataset
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 155 bp overlap
PRDM15 1 dataset
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 145 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 178 bp overlap
REST 71 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 178 bp overlap
ChIP A549 ENCFF148AIS 178 bp overlap
ChIP A549 ENCFF148AIS 178 bp overlap
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP GM12878 ENCFF235NGC 178 bp overlap
ChIP GM12878 ENCFF943QPB 178 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 178 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 178 bp overlap
ChIP GM23338 ENCFF024TCL 178 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 178 bp overlap
ChIP GP5D GSE51234.REST.GP5D 178 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 132 bp overlap
ChIP H1 ENCFF203SWY 178 bp overlap
ChIP H1 ENCFF429RUE 178 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 178 bp overlap
ChIP HCT116 ENCFF929AYY 166 bp overlap
ChIP HEK293 ENCFF073DOT 178 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 178 bp overlap
ChIP HL-60 ENCFF589LOF 178 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 178 bp overlap
ChIP HeLa-S3 ENCFF911DTC 178 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 178 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 178 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 178 bp overlap
ChIP HepG2 ENCFF122AWR 178 bp overlap
ChIP HepG2 ENCFF800JSL 178 bp overlap
ChIP Ishikawa ENCFF456OHV 178 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 178 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 178 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 178 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 178 bp overlap
ChIP K-562 GSE70482.REST.K-562 172 bp overlap
ChIP K562 ENCFF430APM 178 bp overlap
ChIP K562 ENCFF685YZN 178 bp overlap
ChIP K562 ENCFF688UKW 178 bp overlap
ChIP K562 ENCFF758CZL 178 bp overlap
ChIP MCF-7 ENCFF893RRD 178 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 178 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 178 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 178 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 178 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 178 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 178 bp overlap
ChIP PFSK-1 ENCFF668WMP 178 bp overlap
ChIP PFSK-1 ENCFF845VHA 178 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 178 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 178 bp overlap
ChIP Panc1 ENCFF338WSQ 178 bp overlap
ChIP Panc1 ENCFF518EEQ 178 bp overlap
ChIP Panc1 ENCFF629OJO 178 bp overlap
ChIP SK-N-SH ENCFF635KBN 178 bp overlap
ChIP SK-N-SH ENCFF861MKH 178 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 157 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 178 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 178 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 178 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 178 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 178 bp overlap
ChIP hepatocyte ERP000395.REST.hepatocyte 178 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 178 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 178 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 178 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 178 bp overlap
ChIP liver ENCFF240FWT 178 bp overlap
ChIP liver ENCFF577AZT 178 bp overlap
ChIP liver ENCSR893QWP.REST.liver 178 bp overlap
ChIP liver ENCSR867WPH.REST.liver 178 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 178 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.REST.metastatic-neuroblastoma_SKNMM 178 bp overlap
ChIP neural ENCSR000BTV.REST.neural 139 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 178 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 178 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 144 bp overlap
SIN3A 3 datasets
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 88 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 161 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 156 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 130 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 154 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 105 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 173 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 151 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 152 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 133 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 148 bp overlap
SMARCD3 1 dataset
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 159 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 109 bp overlap
SP140L 1 dataset
ChIP Hep-G2 ENCSR107DKT.SP140L.Hep-G2 148 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 91 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 126 bp overlap
TCF25 1 dataset
ChIP Hep-G2 ENCSR110QXM.TCF25.Hep-G2 133 bp overlap
TEAD4 2 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 178 bp overlap
ChIP A549 ENCFF243FTL 173 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 4 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 132 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 177 bp overlap
TFAP2E 2 datasets
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 139 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 178 bp overlap
TGIF2 2 datasets
ChIP Hep-G2 ENCSR993LMB.TGIF2.Hep-G2 101 bp overlap
ChIP HepG2 ENCFF421ZJN 178 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 168 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 61 bp overlap
ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 145 bp overlap
ZBTB21 1 dataset
ChIP Hep-G2 ENCSR549PAU.ZBTB21.Hep-G2 139 bp overlap
ZC3H11A 2 datasets
ChIP A-549 ENCSR277OOQ.ZC3H11A.A-549 150 bp overlap
ChIP A549 ENCFF640AQE 69 bp overlap
ZFP37 1 dataset
ChIP Hep-G2 ENCSR505LJT.ZFP37.Hep-G2 142 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 134 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 147 bp overlap
ZNF12 2 datasets
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 115 bp overlap
ChIP HepG2 ENCFF347LSW 178 bp overlap
ZNF142 1 dataset
ChIP Hep-G2 ENCSR512ECF.ZNF142.Hep-G2 167 bp overlap
ZNF143 2 datasets
ChIP Hep-G2 ENCSR101FJT.ZNF143.Hep-G2 138 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 122 bp overlap
ZNF175 1 dataset
ChIP Hep-G2 ENCSR014RHK.ZNF175.Hep-G2 134 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF232 1 dataset
ChIP Hep-G2 ENCSR837GLU.ZNF232.Hep-G2 165 bp overlap
ZNF263 1 dataset
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 146 bp overlap
ZNF264 1 dataset
ChIP Hep-G2 ENCSR248BVU.ZNF264.Hep-G2 168 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 139 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 130 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 178 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 62 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 178 bp overlap
ZNF426 2 datasets
ChIP HEK293 ENCFF957XYN 86 bp overlap
ChIP HEK293 ENCSR224NFP.ZNF426.HEK293 178 bp overlap
ZNF518A 2 datasets
ChIP HEK293 ENCFF892ULS 76 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 113 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF549 2 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF550 1 dataset
ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 63 bp overlap
ZNF555 1 dataset
ChIP HEK293 ENCSR767XSF.ZNF555.HEK293 127 bp overlap
ZNF629 1 dataset
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 139 bp overlap
ZNF652 1 dataset
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 129 bp overlap
ZNF697 2 datasets
ChIP HEK293 ENCSR217QCK.ZNF697.HEK293 130 bp overlap
ChIP Hep-G2 ENCSR734WFB.ZNF697.Hep-G2 176 bp overlap
ZNF75D 1 dataset
ChIP HepG2 ENCFF253EJU 178 bp overlap
ZNF766 1 dataset
ChIP Hep-G2 ENCSR869RSW.ZNF766.Hep-G2 144 bp overlap
ZNF777 1 dataset
ChIP Hep-G2 ENCSR068ZQR.ZNF777.Hep-G2 144 bp overlap
ZNF781 1 dataset
ChIP HEK293 ENCSR777YSB.ZNF781.HEK293 93 bp overlap
ZNF800 1 dataset
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 149 bp overlap
ZNF883 1 dataset
ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 156 bp overlap
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