chr1 : 146,369,986 – 146,370,294
308 bp 121 TFs 1 linked gene
This 308 bp open chromatin element is linked to RNVU1-29 and is bound by 121 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RNVU1-29 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:146,364,986 – 146,375,294
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
121 transcription factors
Source
Cell type
ATF3 2 datasets
ChIP A-549 ENCSR000BPS.ATF3.A-549 251 bp overlap
ChIP HCT116 ENCFF088WVX 308 bp overlap
BCL11A 1 dataset
ChIP HEK293 ENCFF294OHB 283 bp overlap
BCL11B 1 dataset
ChIP HEK293 ENCFF859UHP 279 bp overlap
BDP1 1 dataset
ChIP HeLa-S3 ENCFF917HGQ 259 bp overlap
BRF1 2 datasets
ChIP H9 GSE94418.BRF1.H9 187 bp overlap
ChIP H9_Activin GSE94418.BRF1.H9_Activin 156 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CEBPA 2 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF175DFS 225 bp overlap
CEBPB 11 datasets
ChIP A549 ENCFF235AIY 257 bp overlap
ChIP A549 ENCFF781RLJ 298 bp overlap
ChIP A549 ENCFF797MXZ 308 bp overlap
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP HCT116 ENCFF097OLY 308 bp overlap
ChIP HeLa-S3 ENCFF722WEG 107 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 145 bp overlap
ChIP HepG2 ENCFF536NTI 208 bp overlap
ChIP MCF-7 ENCFF772ZTQ 179 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 109 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 124 bp overlap
CEBPD 1 dataset
ChIP HepG2 ENCFF345JDB 295 bp overlap
CEBPG 2 datasets
ChIP HepG2 ENCFF503XBC 168 bp overlap
ChIP MCF-7 ENCFF155HZI 308 bp overlap
CLOCK 1 dataset
ChIP MCF-7 ENCFF744CVK 308 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCFF969VBY 308 bp overlap
CTCF 9 datasets
ChIP C4-2B ENCFF821XVN 308 bp overlap
ChIP MCF-7 ENCFF414SZG 178 bp overlap
ChIP MCF-7 ENCFF844STM 143 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 227 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 308 bp overlap
ChIP ovary ENCFF845YUT 281 bp overlap
ChIP transverse colon ENCFF077CMZ 252 bp overlap
ChIP transverse colon ENCFF749DPF 250 bp overlap
ChIP uterus ENCFF466ZUR 308 bp overlap
CUX1 1 dataset
ChIP MCF-7 ENCFF779ATB 308 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 251 bp overlap
ChIP BLaER1 ENCFF274GAT 244 bp overlap
ChIP BLaER1 ENCFF364PUR 234 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCFF712EXQ 292 bp overlap
E2F1 1 dataset
ChIP HeLa GSE22478.E2F1.HeLa 168 bp overlap
ELF1 1 dataset
ChIP MCF-7 ENCFF305BNP 308 bp overlap
ELF3 1 dataset
ChIP HepG2 ENCFF633ULY 308 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 122 bp overlap
FOSL2 2 datasets
ChIP HepG2 ENCFF548CXY 308 bp overlap
ChIP MCF-7 ENCFF716UWP 251 bp overlap
GABPA 2 datasets
ChIP HepG2 ENCFF180FFY 308 bp overlap
ChIP MCF-7 ENCFF735CHO 308 bp overlap
GABPB1 1 dataset
ChIP HepG2 ENCFF315AWN 242 bp overlap
GATA2 2 datasets
ChIP HepG2 ENCFF905PYM 285 bp overlap
ChIP SH-SY5Y ENCFF485YIB 308 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF352QVM 308 bp overlap
ChIP MCF-7 ENCFF437NQS 157 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 160 bp overlap
GATAD2B 2 datasets
ChIP MCF-7 ENCFF718AXM 301 bp overlap
ChIP MCF-7 ENCFF977ZVM 259 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 308 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCFF446EIF 76 bp overlap
GTF3C2 2 datasets
ChIP H9 GSE94418.GTF3C2.H9 198 bp overlap
ChIP HeLa-S3 ENCFF144RTV 241 bp overlap
HDAC2 3 datasets
ChIP HepG2 ENCFF429WTD 308 bp overlap
ChIP HepG2 ENCFF990GUQ 308 bp overlap
ChIP MCF-7 ENCFF881POI 306 bp overlap
HMGXB4 3 datasets
ChIP HepG2 ENCFF032DND 308 bp overlap
ChIP HepG2 ENCFF179TAD 306 bp overlap
ChIP WTC11 ENCFF962POR 308 bp overlap
HSF1 1 dataset
ChIP Hep-G2 ENCSR000EET.HSF1.Hep-G2 138 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCFF518OXG 219 bp overlap
IKZF5 1 dataset
ChIP HepG2 ENCFF641EBK 308 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCFF008ZWC 308 bp overlap
IRF2 1 dataset
ChIP HepG2 ENCFF532TQV 308 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCFF326EGX 305 bp overlap
KLF16 1 dataset
ChIP HEK293 ENCFF558HSJ 308 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCFF658MHR 131 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCFF929IAJ 308 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 308 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 308 bp overlap
MBD2 1 dataset
ChIP MCF-7 ENCFF757JNN 308 bp overlap
MEIS1 1 dataset
ChIP HEK293 ENCFF821TIY 308 bp overlap
MTA1 1 dataset
ChIP MCF-7 ENCFF365KTT 287 bp overlap
MYC 2 datasets
ChIP MCF-7 ENCFF394LGD 214 bp overlap
ChIP MCF-7 ENCFF542NWJ 225 bp overlap
MYNN 1 dataset
ChIP HEK293 ENCFF897QZG 308 bp overlap
MYPOP 1 dataset
ChIP HepG2 ENCFF176TQL 308 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCFF329FZB 261 bp overlap
NR5A2 1 dataset
ChIP A549 ENCFF834RVE 308 bp overlap
OVOL1 2 datasets
ChIP MCF-7 ENCFF537GWI 308 bp overlap
ChIP MCF-7 ENCFF537GWI 115 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 308 bp overlap
ChIP HEK293 ENCFF016MNJ 292 bp overlap
PBX1 1 dataset
ChIP A549 ENCFF475JCE 268 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 168 bp overlap
ChIP MCF-7 ENCFF116OCS 255 bp overlap
POLR2A 22 datasets
ChIP MCF-7 ENCFF309IKZ 142 bp overlap
ChIP MCF-7 ENCFF411WCU 182 bp overlap
ChIP adrenal gland ENCFF843OBJ 297 bp overlap
ChIP body of pancreas ENCFF501FEC 308 bp overlap
ChIP body of pancreas ENCFF501FEC 308 bp overlap
ChIP body of pancreas ENCFF675RCN 308 bp overlap
ChIP breast epithelium ENCFF960NNA 308 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 308 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 139 bp overlap
ChIP prostate gland ENCFF881OMH 308 bp overlap
ChIP prostate gland ENCFF882MXU 212 bp overlap
ChIP sigmoid colon ENCFF725QFT 241 bp overlap
ChIP spleen ENCFF044PYR 146 bp overlap
ChIP spleen ENCFF446ZGT 264 bp overlap
ChIP spleen ENCFF706IUS 121 bp overlap
ChIP thyroid gland ENCFF979LRR 275 bp overlap
ChIP transverse colon ENCFF098HBD 279 bp overlap
ChIP transverse colon ENCFF193UMS 308 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 255 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 308 bp overlap
ChIP uterus ENCFF208ADI 308 bp overlap
ChIP vagina ENCFF384GAB 308 bp overlap
POLR3A 2 datasets
ChIP HeLa-S3 ENCFF777TAS 306 bp overlap
ChIP K562 ENCFF452GCM 308 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 308 bp overlap
RCOR1 1 dataset
ChIP MCF-7 ENCFF833PNP 276 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 308 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 225 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 308 bp overlap
SIN3A 2 datasets
ChIP A549 ENCFF752ATT 168 bp overlap
ChIP MCF-7 ENCFF437VFY 308 bp overlap
SKI 1 dataset
ChIP HepG2 ENCFF631IPX 308 bp overlap
SMARCA5 1 dataset
ChIP MCF-7 ENCFF666AAW 261 bp overlap
SMARCE1 1 dataset
ChIP MCF-7 ENCFF890MHF 249 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 308 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 152 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 308 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCFF827PZY 297 bp overlap
SREBF2 1 dataset
ChIP A549 ENCFF252BOY 285 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 206 bp overlap
TBP 11 datasets
ChIP GM12878 ENCFF571OXR 308 bp overlap
ChIP H1 ENCFF859IIO 246 bp overlap
ChIP HeLa-S3 ENCFF715NNJ 187 bp overlap
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 195 bp overlap
ChIP Hep-G2 ENCSR000EEL.TBP.Hep-G2 160 bp overlap
ChIP HepG2 ENCFF023IVD 230 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 220 bp overlap
ChIP hESC GSE122298.TBP.hESC 150 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 116 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 129 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 119 bp overlap
TEAD4 1 dataset
ChIP MCF-7 ENCFF710WPA 261 bp overlap
TFAP4 1 dataset
ChIP HepG2 ENCFF932XOY 308 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 308 bp overlap
TOP1 1 dataset
ChIP LNCaP_DHT GSE63202.TOP1.LNCaP_DHT 173 bp overlap
TSHZ1 1 dataset
ChIP HEK293 ENCFF893BGV 293 bp overlap
WT1 1 dataset
ChIP HEK293 ENCFF906HIR 308 bp overlap
ZBTB11 1 dataset
ChIP HEK293 ENCFF262GZJ 145 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 308 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 147 bp overlap
ChIP HEK293 ENCFF524ADK 182 bp overlap
ZBTB26 2 datasets
ChIP HEK293 ENCFF752POA 308 bp overlap
ChIP HEK293 ENCFF752TCU 308 bp overlap
ZBTB40 1 dataset
ChIP MCF-7 ENCFF044DWL 308 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCFF809BPK 165 bp overlap
ZBTB6 1 dataset
ChIP HEK293 ENCFF881ECZ 177 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 308 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCFF847JIE 308 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCFF968PWB 308 bp overlap
ZFP69B 1 dataset
ChIP HEK293 ENCFF942LFP 308 bp overlap
ZFX 2 datasets
ChIP HepG2 ENCFF016NZF 308 bp overlap
ChIP MCF-7 ENCFF009NAJ 178 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 308 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCFF611ZJI 217 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCFF638TIB 308 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 286 bp overlap
ChIP HEK293 ENCFF641ICT 304 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCFF379OSU 261 bp overlap
ZNF24 3 datasets
ChIP HEK293 ENCFF308WOW 308 bp overlap
ChIP HepG2 ENCFF086UMQ 270 bp overlap
ChIP MCF-7 ENCFF861XIL 268 bp overlap
ZNF324 1 dataset
ChIP HEK293 ENCFF062DPE 308 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 285 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCFF944VMC 153 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 308 bp overlap
ZNF391 1 dataset
ChIP HEK293 ENCFF835SNY 308 bp overlap
ZNF394 1 dataset
ChIP HEK293 ENCFF236OPX 308 bp overlap
ZNF48 1 dataset
ChIP HepG2 ENCFF362CDQ 308 bp overlap
ZNF501 2 datasets
ChIP HEK293 ENCFF066RAQ 308 bp overlap
ChIP HEK293 ENCFF066RAQ 256 bp overlap
ZNF558 1 dataset
ChIP HEK293 ENCFF994JWH 308 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCFF399XKF 117 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 308 bp overlap
ZNF579 1 dataset
ChIP MCF-7 ENCFF550XRS 249 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 236 bp overlap
ZNF623 1 dataset
ChIP HEK293 ENCFF505YHP 308 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCFF096ELQ 295 bp overlap
ZNF639 1 dataset
ChIP HEK293 ENCFF971ZNH 308 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCFF282RUS 133 bp overlap
ZNF687 1 dataset
ChIP MCF-7 ENCFF440BFX 240 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCFF040AZE 308 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCFF374TCG 243 bp overlap
ZSCAN21 1 dataset
ChIP HEK293 ENCFF582WUP 156 bp overlap
ZSCAN23 1 dataset
ChIP HEK293 ENCFF127TFV 308 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCFF082YBI 153 bp overlap
ZSCAN4 1 dataset
ChIP HEK293 ENCFF381BKT 308 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 277 bp overlap
ChIP HEK293 ENCFF835SGA 308 bp overlap
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