chr5 : 117,095,318 117,095,997
679 bp 123 TFs 0 linked genes
This 679 bp open chromatin element has no linked target genes and is bound by 123 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:117,090,318 – 117,100,997
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
123 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 159 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 204 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 62 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 392 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 122 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 581 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 453 bp overlap
BRD4 7 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 238 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 261 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 202 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 107 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 190 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 504 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 350 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 211 bp overlap
CTBP1 2 datasets
ChIP HEK293T ENCFF003PDY 148 bp overlap
ChIP HEK293T ENCSR237TFX.CTBP1.HEK293T 126 bp overlap
CTCF 2 datasets
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 276 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF844FIP 333 bp overlap
ChIP BLaER1 ENCFF896HSY 346 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 124 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 321 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 307 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCFF692SMY 118 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 295 bp overlap
ChIP hESC GSE26097.EOMES.hESC 164 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 121 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 679 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 138 bp overlap
FOXA1 2 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 123 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 144 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 104 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCFF485YIB 405 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 293 bp overlap
ChIP SK-N-SH ENCFF764OZD 383 bp overlap
GATA3 4 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 293 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 199 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 317 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 194 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-2 296 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 462 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 88 bp overlap
GATA6 7 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 679 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 679 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 679 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 566 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 679 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 679 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 254 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 334 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 636 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 315 bp overlap
HIC1 3 datasets
ChIP HEK293 ENCFF252CFL 274 bp overlap
ChIP HEK293 ENCFF252CFL 75 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 189 bp overlap
HOXB13 2 datasets
ChIP 22Rv1 GSE96652.HOXB13.22Rv1 159 bp overlap
ChIP LNCaP GSE56288.HOXB13.LNCaP 80 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 598 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 462 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 244 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 648 bp overlap
KLF3 1 dataset
ChIP HEK293 GSE69739.KLF3.HEK293 67 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 67 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 416 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 265 bp overlap
LHX6 1 dataset
Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap
MAX 1 dataset
ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 125 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 595 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 183 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 93 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 234 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 126 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 50 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 76 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 85 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCFF273VKX 262 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
OSR2 5 datasets
Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap
ChIP HEK293 ENCFF875BDB 179 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 290 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 167 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 176 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 171 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 101 bp overlap
PKNOX1 3 datasets
ChIP HEK293T ENCFF174WDB 212 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 199 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 250 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 97 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 256 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 421 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 350 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 297 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 264 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 622 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 212 bp overlap
RAD21 5 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 283 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 601 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 109 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 679 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 459 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 586 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 489 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 93 bp overlap
RFX7 1 dataset
Motif DE_36h DE_36h-RFX7_MA1554.2 8 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 116 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 108 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 182 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 322 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 145 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 278 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 149 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 679 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 436 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 578 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 283 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 307 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 593 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 348 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 600 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 306 bp overlap
SMARCC1 6 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 436 bp overlap
ChIP DE_D1 S10-DE-d1-BAF155-exp1 170 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 447 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 138 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 322 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 177 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 203 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 194 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 679 bp overlap
SPI1 1 dataset
ChIP GM12878 ENCFF134LCP 156 bp overlap
STAT1 1 dataset
Motif DE_36h DE_36h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap
Stat5b 1 dataset
Motif DE_36h DE_36h-Stat5b_MA1625.2 9 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 208 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 253 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 217 bp overlap
TEAD1 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 165 bp overlap
TEAD4 2 datasets
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 72 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 130 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 51 bp overlap
TRIM28 5 datasets
ChIP HEK293 ENCFF582MWI 532 bp overlap
ChIP HEK293 ENCFF582MWI 576 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 608 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 84 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 84 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 159 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 108 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 592 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 120 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 130 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 138 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 294 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 193 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 208 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 193 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 128 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 127 bp overlap
ZNF121 1 dataset
ChIP HEK293 ENCFF839FUF 261 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 186 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 225 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 96 bp overlap
ZNF324 2 datasets
ChIP HEK293 GSE76494.ZNF324.HEK293 158 bp overlap
ChIP HEK293 ENCSR768HOH.ZNF324.HEK293 133 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 294 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 204 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 194 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 242 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 248 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 235 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 215 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 118 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 210 bp overlap
ZNF41 1 dataset
ChIP HEK293 GSE76494.ZNF41.HEK293 192 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 226 bp overlap
ZNF610 2 datasets
ChIP HEK293 ENCFF778UKJ 207 bp overlap
ChIP HEK293 ENCSR691TXI.ZNF610.HEK293 180 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 84 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 134 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 115 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 223 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 154 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 156 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap