chr5 : 109,945,314 109,945,686
372 bp 134 TFs 0 linked genes
This 372 bp open chromatin element has no linked target genes and is bound by 134 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:109,940,314 – 109,950,686
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
134 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 121 bp overlap
ARNTL 3 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 266 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 266 bp overlap
ChIP U2OS_cordycepin GSE130506.ARNTL.U2OS_cordycepin 286 bp overlap
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ATF2 1 dataset
ChIP HepG2 ENCFF578ZBI 89 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BAZ2A 1 dataset
ChIP HepG2 ENCFF797RVO 116 bp overlap
BCL11B 2 datasets
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 357 bp overlap
ChIP thymus_CD34pos GSE84677.BCL11B.thymus_CD34pos 321 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 208 bp overlap
BRD4 15 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 372 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 64 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 317 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 191 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 372 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 372 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 243 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 372 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 372 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 180 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 372 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 121 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 87 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 206 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 92 bp overlap
CDK7 2 datasets
ChIP Jurkat GSE83777.CDK7.Jurkat 336 bp overlap
ChIP Jurkat_DMSO GSE60027.CDK7.Jurkat_DMSO 245 bp overlap
CDK9 7 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 92 bp overlap
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 214 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 320 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 280 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 273 bp overlap
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 171 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 179 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 180 bp overlap
CTCF 5 datasets
ChIP DND-41 ENCFF913MRA 135 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 213 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 372 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 265 bp overlap
ChIP TALL-1_Pat1 GSE130140.CTCF.TALL-1_Pat1 117 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 288 bp overlap
DRAP1 1 dataset
ChIP HepG2 ENCFF296JHR 110 bp overlap
EED 1 dataset
ChIP HepG2 ENCFF347CCA 354 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 97 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 311 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 133 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 164 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 73 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 159 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 152 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 190 bp overlap
FOXA2 2 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 56 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 143 bp overlap
GABPB1 1 dataset
ChIP HepG2 ENCFF315AWN 274 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 270 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 312 bp overlap
GATAD2A 2 datasets
ChIP HepG2 ENCFF252XNH 100 bp overlap
ChIP HepG2 ENCFF252XNH 308 bp overlap
HMG20A 1 dataset
ChIP HepG2 ENCFF599VWU 121 bp overlap
HNF1B 2 datasets
ChIP HepG2 ENCFF928THX 372 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 256 bp overlap
IKZF5 2 datasets
ChIP HepG2 ENCFF641EBK 118 bp overlap
ChIP HepG2 ENCFF641EBK 319 bp overlap
IRF4 2 datasets
ChIP T-cell GSE136853.IRF4.T-cell 266 bp overlap
ChIP U266 GSE142493.IRF4.U266 246 bp overlap
JRK 1 dataset
ChIP HepG2 ENCFF350YLO 133 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 344 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 334 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 356 bp overlap
KDM3A 1 dataset
ChIP HepG2 ENCFF077DXQ 120 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 186 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 135 bp overlap
ChIP PDAC GSE64557.KLF4.PDAC 113 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 372 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KMT2A 2 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 244 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 323 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 322 bp overlap
MAX 4 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 146 bp overlap
ChIP HepG2 ENCFF479OHI 372 bp overlap
ChIP HepG2 ENCFF507HCX 372 bp overlap
ChIP HepG2 ENCFF507HCX 323 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MED1 6 datasets
ChIP MM1-S_BIORU GSE45984.MED1.MM1-S_BIORU 279 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 372 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 305 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 372 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 372 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 372 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYB 4 datasets
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 193 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 372 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 372 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 357 bp overlap
MYBL2 2 datasets
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 87 bp overlap
ChIP HepG2 ENCFF176QIX 182 bp overlap
MYC 2 datasets
ChIP Jurkat GSE83777.MYC.Jurkat 334 bp overlap
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 372 bp overlap
MYOD1 1 dataset
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 372 bp overlap
NFYC 1 dataset
ChIP HepG2 ENCFF836FYP 99 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 269 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 372 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 131 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PAXIP1 1 dataset
ChIP HepG2 ENCFF526NOJ 176 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 218 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 86 bp overlap
ChIP HepG2 ENCFF508UTS 86 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 186 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 353 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 248 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 165 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE76181.RUNX1.Jurkat 280 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 283 bp overlap
RUNX2 2 datasets
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 331 bp overlap
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 192 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 143 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 212 bp overlap
SCRT1 2 datasets
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SCRT2 2 datasets
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 311 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 361 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 229 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 237 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 364 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 236 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 104 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 262 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 183 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 363 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 331 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
ChIP liver ENCFF769YSM 120 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
STAT5B 2 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 158 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 113 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 372 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
ChIP HepG2 ENCFF811TLA 372 bp overlap
ChIP HepG2 ENCFF811TLA 263 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 67 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 355 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 2 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 227 bp overlap
TEAD1 1 dataset
ChIP HepG2 ENCFF661PNM 90 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 130 bp overlap
TFAP4 3 datasets
ChIP DLD-1 GSE46935.TFAP4.DLD-1 149 bp overlap
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 64 bp overlap
ChIP HepG2 ENCFF030SRU 65 bp overlap
THAP11 2 datasets
ChIP HepG2 ENCFF272SWH 123 bp overlap
ChIP HepG2 ENCFF272SWH 327 bp overlap
THRA 1 dataset
ChIP HepG2 ENCFF025KMX 94 bp overlap
TP53 1 dataset
ChIP lymphocyte_116_Nutlin GSE110368.TP53.lymphocyte_116_Nutlin 77 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
WIZ 1 dataset
ChIP HepG2 ENCFF559CYZ 95 bp overlap
ZBTB38 2 datasets
ChIP HepG2 ENCFF875UQX 337 bp overlap
ChIP HepG2 ENCFF875UQX 352 bp overlap
ZBTB44 1 dataset
ChIP HepG2 ENCFF033EIH 263 bp overlap
ZBTB7B 2 datasets
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 239 bp overlap
ChIP HepG2 ENCFF763OCV 101 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 370 bp overlap
ZGPAT 3 datasets
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 213 bp overlap
ChIP HepG2 ENCFF055YSO 372 bp overlap
ChIP HepG2 ENCFF055YSO 372 bp overlap
ZMIZ1 1 dataset
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 195 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 178 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF343 1 dataset
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
ZNF501 2 datasets
ChIP HepG2 ENCFF879XZR 209 bp overlap
ChIP HepG2 ENCFF879XZR 372 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF610 1 dataset
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 372 bp overlap
ZNF691 1 dataset
ChIP HepG2 ENCFF427OHT 210 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap