chr5 : 78,649,777 78,650,069
292 bp 106 TFs 1 linked gene
This 292 bp open chromatin element is linked to LHFPL2 and is bound by 106 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LHFPL2 882 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:78,644,777 – 78,655,069
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 244 bp overlap
ARNTL 1 dataset
ChIP Hep-G2 ENCSR794LVK.ARNTL.Hep-G2 114 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 250 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 143 bp overlap
BAP1 1 dataset
ChIP UM-RC-6_BAP1-C91A-mutant GSE101987.BAP1.UM-RC-6_BAP1-C91A-mutant 170 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 161 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 215 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 208 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 215 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 161 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 63 bp overlap
CBFB 1 dataset
ChIP Hep-G2 ENCSR479RZV.CBFB.Hep-G2 116 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 190 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 292 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 247 bp overlap
CTCF 22 datasets
ChIP A-549 ENCSR000DNA.CTCF.A-549 159 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 209 bp overlap
ChIP A549 ENCFF182TCQ 217 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H9 ENCFF152GTF 292 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 192 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 113 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 126 bp overlap
ChIP HepG2 ENCFF127KUP 215 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 292 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 144 bp overlap
ChIP OCI-LY1 ENCFF455ESK 292 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 292 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 289 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 197 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 131 bp overlap
ChIP endodermal cell ENCFF471YCZ 286 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 292 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 141 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 175 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 141 bp overlap
DNMT3B 1 dataset
ChIP HepG2 ENCFF341GEA 111 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 105 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 292 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 271 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 196 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 136 bp overlap
ELF1 5 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 152 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 85 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 108 bp overlap
ChIP K562 ENCFF496AKI 137 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 190 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 166 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 124 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 197 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 157 bp overlap
ETS1 4 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 206 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 259 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 144 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 86 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 292 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 197 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 243 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 279 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 277 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 233 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 255 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 251 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 292 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 281 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 258 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 292 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 202 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 292 bp overlap
GMEB1 1 dataset
ChIP Hep-G2 ENCSR780OXL.GMEB1.Hep-G2 103 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 237 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 192 bp overlap
HMGN3 1 dataset
ChIP K562 ENCFF083BIJ 97 bp overlap
HMGXB4 2 datasets
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 292 bp overlap
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 231 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 160 bp overlap
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 166 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 198 bp overlap
HSF1 3 datasets
ChIP BPE_HEAT GSE38901.HSF1.BPE_HEAT 86 bp overlap
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 105 bp overlap
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 148 bp overlap
HSF2 2 datasets
ChIP Hep-G2 ENCSR764ZBK.HSF2.Hep-G2 82 bp overlap
ChIP HepG2 ENCFF562EOM 162 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF824TGK 119 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 55 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 215 bp overlap
KLF6 2 datasets
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 234 bp overlap
ChIP PDAC GSE64557.KLF6.PDAC 119 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 272 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 190 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 174 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 229 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 271 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 204 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 292 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 171 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 118 bp overlap
NRF1 1 dataset
ChIP HepG2 ENCFF694NVY 292 bp overlap
PHF21A 1 dataset
ChIP HepG2 ENCFF525EUW 292 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 238 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 292 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 213 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 267 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 160 bp overlap
RAD21 13 datasets
ChIP H1 ENCFF698EWO 210 bp overlap
ChIP H1 ENCFF967OJF 231 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 182 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 146 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 125 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 218 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 223 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 188 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 154 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 186 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 292 bp overlap
REST 1 dataset
ChIP CD4 GSE49570.REST.CD4 152 bp overlap
RNF2 1 dataset
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 226 bp overlap
SAP130 2 datasets
ChIP HepG2 ENCFF892EHZ 280 bp overlap
ChIP HepG2 ENCFF892EHZ 81 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 263 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 112 bp overlap
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 114 bp overlap
SMAD7 1 dataset
ChIP HepG2 ENCFF850FXR 77 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 118 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 222 bp overlap
SMARCB1 2 datasets
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 170 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 180 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 246 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 162 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 264 bp overlap
SOX2 2 datasets
ChIP H9 GSE46837.SOX2.H9 156 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 167 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 188 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 216 bp overlap
ChIP WTC11 ENCFF688PEU 274 bp overlap
SPI1 13 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 108 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 104 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 129 bp overlap
ChIP GM12878 ENCFF134LCP 174 bp overlap
ChIP GM12891 ENCFF563IUT 161 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 97 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 105 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 86 bp overlap
ChIP K562 ENCFF410ORC 112 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 149 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 102 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 59 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 68 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 133 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 219 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 213 bp overlap
ChIP HepG2 ENCFF843EBZ 259 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 202 bp overlap
TAF1 4 datasets
ChIP H1 ENCFF478SZO 292 bp overlap
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 128 bp overlap
ChIP HepG2 ENCFF946IUP 103 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 237 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 187 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 125 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 292 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 292 bp overlap
U2AF1 2 datasets
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 167 bp overlap
ChIP Hep-G2 ENCSR868JLS.U2AF1.Hep-G2 168 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 210 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 193 bp overlap
YY1 2 datasets
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 135 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 241 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 181 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 183 bp overlap
ZBTB26 1 dataset
ChIP HepG2 ENCFF492SAJ 190 bp overlap
ZBTB33 2 datasets
ChIP HepG2 ENCFF778UKV 277 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 285 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 150 bp overlap
ZFP37 1 dataset
ChIP Hep-G2 ENCSR505LJT.ZFP37.Hep-G2 112 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 108 bp overlap
ZFX 2 datasets
ChIP HepG2 ENCFF016NZF 184 bp overlap
ChIP HepG2 ENCFF016NZF 292 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 233 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 292 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 171 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 133 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 187 bp overlap
ZNF710 2 datasets
ChIP HepG2 ENCFF170JWO 292 bp overlap
ChIP HepG2 ENCFF170JWO 123 bp overlap