chr5 : 66,945,362 66,945,673
311 bp 120 TFs 0 linked genes
This 311 bp open chromatin element has no linked target genes and is bound by 120 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:66,940,362 – 66,950,673
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
120 transcription factors
Source
Cell type
AR 6 datasets
ChIP LNCaP GSE80256.AR.LNCaP 184 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 118 bp overlap
ChIP LNCaP_D226N_shFOXA1_Ethanol GSE128883.AR.LNCaP_D226N_shFOXA1_Ethanol 134 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 135 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 155 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 174 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 219 bp overlap
ARNTL 1 dataset
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 193 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 102 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 297 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 51 bp overlap
BATF 4 datasets
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
ChIP GM12878 ENCFF954REE 200 bp overlap
ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 236 bp overlap
ChIP OCI-Ly3 GSE56857.BATF.OCI-Ly3 186 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 210 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 208 bp overlap
BRD4 5 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 122 bp overlap
ChIP COLO-320 GSE73319.BRD4.COLO-320 311 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 271 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 271 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 289 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 141 bp overlap
BRD9 1 dataset
ChIP Mel270_DMSO GSE124720.BRD9.Mel270_DMSO 177 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 119 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 138 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 116 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 264 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 244 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 142 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 241 bp overlap
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
ChIP Hep-G2 ENCSR177HDZ.FOS.Hep-G2 159 bp overlap
ChIP MCF-7 ENCFF282FWZ 233 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 311 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL2 10 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 237 bp overlap
ChIP A-549 ENCSR448TVS.FOSL2.A-549 263 bp overlap
ChIP A549 ENCFF195CES 294 bp overlap
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 196 bp overlap
ChIP HepG2 ENCFF548CXY 198 bp overlap
ChIP HepG2 ENCFF796NIA 217 bp overlap
ChIP MCF-7 ENCFF716UWP 283 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 210 bp overlap
ChIP NPC GSE122631.FOSL2.NPC 188 bp overlap
FOXA1 4 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 139 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 306 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 311 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 239 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 260 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 311 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 243 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 144 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 209 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 229 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 311 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 220 bp overlap
GRHL2 1 dataset
ChIP T-47D GSE99680.GRHL2.T-47D 76 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 305 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 217 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 226 bp overlap
HOXB13 2 datasets
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 83 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 163 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 249 bp overlap
IRF4 9 datasets
ChIP B-cell GSE142493.IRF4.B-cell 167 bp overlap
ChIP BC-3 GSE132777.IRF4.BC-3 311 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 224 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 109 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 109 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 218 bp overlap
ChIP OCI-Ly3 GSE142493.IRF4.OCI-Ly3 230 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.IRF4.OCI-Ly3_SHCTR 193 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 249 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 311 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 311 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 311 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 216 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 223 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 269 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 311 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 271 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 275 bp overlap
JUNB 6 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 311 bp overlap
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
ChIP GM12878 ENCFF667EJQ 311 bp overlap
ChIP GM12878 ENCFF667EJQ 72 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 262 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 250 bp overlap
JUND 10 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 160 bp overlap
ChIP H1 ENCFF010YXS 250 bp overlap
ChIP H1 ENCFF468JZD 229 bp overlap
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 192 bp overlap
ChIP HepG2 ENCFF172HFZ 222 bp overlap
ChIP HepG2 ENCFF869OPW 237 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 143 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 240 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 112 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KDM5A 1 dataset
ChIP WA01 ENCSR000AQL.KDM5A.WA01 114 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 168 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MYC 3 datasets
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 102 bp overlap
ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 100 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 135 bp overlap
MYCN 1 dataset
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 59 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 222 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 65 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 213 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 204 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 198 bp overlap
NR3C1 3 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 201 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 118 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 197 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 146 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 311 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 244 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 153 bp overlap
ChIP HEK293 ENCFF302TBP 75 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 116 bp overlap
RELA 3 datasets
ChIP CD4_Th1_DMSO GSE62482.RELA.CD4_Th1_DMSO 137 bp overlap
ChIP KB_IL GSE52469.RELA.KB_IL 94 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 229 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 70 bp overlap
SMARCA4 16 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 118 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 85 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 186 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 182 bp overlap
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 232 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 216 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 299 bp overlap
ChIP A-549_AG15690 GSE132290.SMARCA4.A-549_AG15690 208 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 100 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 122 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 254 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 158 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 304 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 273 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 204 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 234 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 265 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 232 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 211 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 311 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 200 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 230 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 285 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 202 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 87 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 173 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 139 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 146 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 101 bp overlap
TEAD4 2 datasets
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 226 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 223 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 155 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 74 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 311 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 311 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 278 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 211 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 311 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 228 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 261 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 311 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 311 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 125 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 311 bp overlap
ZNF134 1 dataset
ChIP HEK293 GSE76494.ZNF134.HEK293 140 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 299 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 239 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 113 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 311 bp overlap
ChIP HEK293 ENCFF784SLD 311 bp overlap
ZNF343 1 dataset
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 150 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 143 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 157 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 114 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 203 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 146 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 126 bp overlap