chr20 : 64,084,653 64,085,015
362 bp 113 TFs 3 linked genes
This 362 bp open chromatin element is linked to LKAAEAR1, OPRL1, and RGS19 and is bound by 113 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
LKAAEAR1 294 bp At TSS Proximity
OPRL1 4.6 kb Proximal Proximity
RGS19 4.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:64,079,653 – 64,090,015
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 224 bp overlap
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 348 bp overlap
AGO1 4 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 236 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 227 bp overlap
ChIP HepG2 ENCFF358CXO 358 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 285 bp overlap
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 150 bp overlap
ARNTL 1 dataset
ChIP GSC_387 GSE134972.ARNTL.GSC_387 154 bp overlap
ASCL1 4 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 163 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 184 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 186 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 185 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 169 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34pos GSE84677.BCL11B.thymus_CD34pos 65 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 51 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 244 bp overlap
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 275 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 84 bp overlap
BRD4 11 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 301 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 362 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 309 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 264 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 349 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 362 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 262 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 122 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 143 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 143 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 362 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 252 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 168 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 261 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 362 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP MCF-7 ENCFF570JPP 243 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 53 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 99 bp overlap
EGR1 3 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 362 bp overlap
ChIP HepG2 ENCFF674RQO 362 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 170 bp overlap
ESR1 7 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 243 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 227 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 211 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 301 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 267 bp overlap
ChIP MCF-7_vehicle_45min_I2 GSE99626.ESR1.MCF-7_vehicle_45min_I2 339 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 296 bp overlap
EZH2 36 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 121 bp overlap
ChIP A-673 ENCSR179SAO.EZH2.A-673 270 bp overlap
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 345 bp overlap
ChIP GM23248 ENCFF404ZHM 161 bp overlap
ChIP GM23248 ENCFF404ZHM 362 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 173 bp overlap
ChIP GM23338 ENCFF613YON 234 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 132 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 362 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 362 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 284 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 252 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 314 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 362 bp overlap
ChIP ProEs GSE59087.EZH2.ProEs 137 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 362 bp overlap
ChIP SU-DHL-6_DMSO GSE134136.EZH2.SU-DHL-6_DMSO 97 bp overlap
ChIP T98G GSE112240.EZH2.T98G 118 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 198 bp overlap
ChIP astrocyte ENCFF365JTP 304 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 69 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 306 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 362 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 183 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 184 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 315 bp overlap
ChIP fibroblast of lung ENCFF479BAW 110 bp overlap
ChIP fibroblast of lung ENCFF479BAW 147 bp overlap
ChIP hepatocyte ENCFF552DZB 297 bp overlap
ChIP keratinocyte ENCFF070STK 225 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 362 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 119 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 110 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 181 bp overlap
ChIP neural progenitor cell ENCFF018MKA 60 bp overlap
ChIP neural progenitor cell ENCFF472NFV 186 bp overlap
FOXA1 16 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 240 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 208 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 186 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 182 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 83 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 96 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 195 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 142 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 158 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 100 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 164 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 96 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 162 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 94 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 298 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 331 bp overlap
FOXA2 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 351 bp overlap
FOXJ3 1 dataset
ChIP K562 ENCFF605HNH 183 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR000BLO.GABPA.K-562 137 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 362 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 112 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 310 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 244 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 282 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 271 bp overlap
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 271 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 107 bp overlap
KDM5B 2 datasets
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 181 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 153 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 355 bp overlap
KLF14 1 dataset
ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 362 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 312 bp overlap
KLF4 1 dataset
ChIP hiPSC GSE56567.KLF4.hiPSC 147 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 97 bp overlap
KMT2A 3 datasets
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 202 bp overlap
ChIP MOLM-13_DMSO-D3-180110 GSE127507.KMT2A.MOLM-13_DMSO-D3-180110 215 bp overlap
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 111 bp overlap
LBX2 1 dataset
ChIP HepG2 ENCFF188CXN 116 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 195 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 55 bp overlap
ChIP Ishikawa ENCFF064TDQ 286 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 130 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 193 bp overlap
MCRS1 2 datasets
ChIP Hep-G2 GSE107730.MCRS1.Hep-G2 362 bp overlap
ChIP Hep-G2 GSE97411.MCRS1.Hep-G2 362 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 239 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 362 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 295 bp overlap
MYC 1 dataset
ChIP HepG2 ENCFF575FXK 254 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 80 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 222 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 275 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 362 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 355 bp overlap
NFYA 1 dataset
ChIP HepG2 ENCFF883OMO 80 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 340 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 344 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 222 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 284 bp overlap
PATZ1 2 datasets
ChIP HepG2 ENCFF723PFC 209 bp overlap
ChIP HepG2 ENCFF723PFC 229 bp overlap
PCBP1 4 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 362 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 348 bp overlap
ChIP HepG2 ENCFF447SRJ 295 bp overlap
ChIP HepG2 ENCFF604TPT 295 bp overlap
POLR2A 1 dataset
ChIP gastroesophageal sphincter ENCFF461UHJ 82 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 227 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 248 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 175 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 265 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 362 bp overlap
PTBP1 3 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 362 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 295 bp overlap
ChIP HepG2 ENCFF472NST 118 bp overlap
RAD21 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 134 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 134 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 94 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 362 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 264 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 322 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 263 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 248 bp overlap
ChIP K562 ENCFF421AVO 236 bp overlap
ChIP K562 ENCFF809XVG 186 bp overlap
ChIP MCF-7 ENCFF782EZS 214 bp overlap
ChIP MCF-7 ENCFF973QAD 212 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 275 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 260 bp overlap
RFX3 1 dataset
ChIP Hep-G2 ENCSR633OVO.RFX3.Hep-G2 124 bp overlap
RNF2 2 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 51 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 209 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 342 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 252 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 124 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 291 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 362 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 290 bp overlap
SMARCA4 1 dataset
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 268 bp overlap
SP1 3 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 69 bp overlap
ChIP HEK293 GSE76494.SP1.HEK293 211 bp overlap
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 98 bp overlap
SP110 1 dataset
ChIP HepG2 ENCFF955FSH 194 bp overlap
SP4 3 datasets
ChIP HEK293 GSE76494.SP4.HEK293 209 bp overlap
ChIP HepG2 ENCFF865DSQ 99 bp overlap
ChIP HepG2 ENCFF865DSQ 326 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 310 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 253 bp overlap
SRSF1 2 datasets
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF509LHO 205 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 146 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 290 bp overlap
SUZ12 3 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 98 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 186 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 194 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 362 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 270 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 270 bp overlap
TFAP4 3 datasets
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF932XOY 73 bp overlap
ChIP HepG2 ENCFF932XOY 282 bp overlap
TGIF2 2 datasets
ChIP WTC11 ENCFF649SHI 356 bp overlap
ChIP WTC11 ENCFF649SHI 247 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 154 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 235 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 218 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 170 bp overlap
ChIP HepG2 ENCFF201JKA 195 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 128 bp overlap
USF2 1 dataset
ChIP K-562 GSE111469.USF2.K-562 309 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 343 bp overlap
XRCC5 2 datasets
ChIP HepG2 ENCFF330PDO 280 bp overlap
ChIP HepG2 ENCFF680LVJ 277 bp overlap
ZBTB7A 4 datasets
ChIP Ishikawa ENCFF191NFH 246 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 128 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 137 bp overlap
ChIP K562 ENCFF579ZGM 146 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 293 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 291 bp overlap
ZNF350 1 dataset
ChIP HepG2 ENCFF595LWL 252 bp overlap
ZNF407 2 datasets
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 323 bp overlap
ChIP HepG2 ENCFF537FDC 361 bp overlap
ZNF414 1 dataset
ChIP HepG2 ENCFF809EHH 70 bp overlap
ZNF552 1 dataset
ChIP HepG2 ENCFF747BVA 216 bp overlap
ZNF608 1 dataset
ChIP HepG2 ENCFF713QUJ 150 bp overlap
ZNF670 1 dataset
ChIP HepG2 ENCFF684IKN 177 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 170 bp overlap
ZNF83 1 dataset
ChIP HepG2 ENCFF450KKE 362 bp overlap
ZNF883 2 datasets
ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 160 bp overlap
ChIP HepG2 ENCFF807XLY 337 bp overlap