chr16 : 54,049,593 54,049,980
387 bp 103 TFs 0 linked genes
This 387 bp open chromatin element has no linked target genes and is bound by 103 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:54,044,593 – 54,054,980
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 222 bp overlap
ChIP LNCaP_L388M_shFOXA1_Ethanol GSE128883.AR.LNCaP_L388M_shFOXA1_Ethanol 187 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 387 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 258 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 172 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 193 bp overlap
BRD2 3 datasets
ChIP MV4-11_DMSO GSE120715.BRD2.MV4-11_DMSO 227 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 336 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 387 bp overlap
BRD3 4 datasets
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 387 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 372 bp overlap
ChIP THP-1_DMSO GSE138084.BRD3.THP-1_DMSO 348 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD3.THP-1_iBET-BD2 346 bp overlap
BRD4 9 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 194 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 387 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 364 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 169 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 92 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 120 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 348 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 368 bp overlap
ChIP hESC GSE33281.BRD4.hESC 110 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 233 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 387 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 145 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 212 bp overlap
CTCF 2 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 293 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 120 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 58 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 124 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 132 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 92 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 302 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 116 bp overlap
ChIP DE DE-FOXA2-2 305 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 151 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 328 bp overlap
GATA6 2 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 339 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 387 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 217 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 267 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 308 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 68 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 316 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 287 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 76 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 363 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 152 bp overlap
KLF1 1 dataset
ChIP HEK293 GSE76494.KLF1.HEK293 160 bp overlap
KLF4 2 datasets
ChIP WA09 GSE105028.KLF4.WA09 171 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 200 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 145 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE83671.KMT2A.THP-1 183 bp overlap
MAX 1 dataset
ChIP NB4 ENCFF966MWB 154 bp overlap
MAZ 2 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 215 bp overlap
MED1 5 datasets
ChIP Jurkat GSE59657.MED1.Jurkat 270 bp overlap
ChIP MOLM-13 GSE154985.MED1.MOLM-13 318 bp overlap
ChIP MOLM-14 GSE65138.MED1.MOLM-14 387 bp overlap
ChIP MOLM-14_DHE GSE124963.MED1.MOLM-14_DHE 181 bp overlap
ChIP MOLM-14_Veh GSE124963.MED1.MOLM-14_Veh 120 bp overlap
MEN1 1 dataset
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 196 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 387 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 387 bp overlap
NANOG 5 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 85 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 387 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 123 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 387 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 150 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 162 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 124 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 306 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 172 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 299 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 109 bp overlap
PITX3 2 datasets
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 187 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 120 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 337 bp overlap
POU5F1 9 datasets
ChIP BG03 GSE21614.POU5F1.BG03 203 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 214 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 336 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 276 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 51 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 96 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 387 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 281 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 182 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 329 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 131 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 228 bp overlap
RBPJ 1 dataset
ChIP THP-6_shCtrl GSE138516.RBPJ.THP-6_shCtrl 323 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 52 bp overlap
REST 1 dataset
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 129 bp overlap
RNF2 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 151 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 261 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 307 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 99 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 52 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 387 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 183 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 251 bp overlap
SMARCA4 7 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 387 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 387 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 72 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 179 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 143 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 387 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 272 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 288 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 387 bp overlap
SMARCC1 7 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 249 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 224 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 223 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 387 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 387 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 387 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 249 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 303 bp overlap
SOX2 8 datasets
ChIP HNSC GSE69479.SOX2.HNSC 387 bp overlap
ChIP NPC GSE122631.SOX2.NPC 78 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 303 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 110 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 277 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 238 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 209 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 95 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 378 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 158 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 142 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 243 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 235 bp overlap
TBP 1 dataset
ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 214 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 368 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 60 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 224 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 60 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 170 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 284 bp overlap
THAP7 1 dataset
ChIP HepG2 ENCFF034KPY 274 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 250 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 54 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 162 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 166 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 166 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 120 bp overlap
YY1 2 datasets
ChIP ALL GSE145549.YY1.ALL 86 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 184 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 186 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 295 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF157 1 dataset
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 142 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 387 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 387 bp overlap
ZNF341 4 datasets
ChIP HEK293 ENCFF944VMC 370 bp overlap
ChIP HEK293 ENCFF944VMC 245 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 387 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 135 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 296 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 219 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 188 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 341 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap