chr15:64,808,791–64,809,297

chr15 : 64,808,791 – 64,809,297

506 bp 89 TFs 8 linked genes

This 506 bp open chromatin element is linked to 8 target genes and is bound by 89 transcription factors.

Linked Genes

8 genes

Gene	Expression	Dist. to TSS	Distance	Link type
PIF1		16.5 kb	Distal	Multiome
PLEKHO2		32.8 kb	Distal	Multiome
RBPMS2		33.5 kb	Distal	Multiome+HiCAR
ANKDD1A		102.8 kb	Distal	Multiome
OAZ2		105.9 kb	Distal	Multiome
SPG21		180.8 kb	Distal	Multiome
MTFMT		220.5 kb	Distal	Multiome
UBAP1L		292.5 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

89 transcription factors

ChIP WTC11 ENCFF556XTF 330 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 506 bp overlap

BACH1 1 dataset

ChIP WA01 ENCSR000EBQ.BACH1.WA01 162 bp overlap

BCOR 4 datasets

ChIP WA01 GSE104690.BCOR.WA01 267 bp overlap

ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 248 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 225 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 506 bp overlap

BRD1 2 datasets

ChIP HUES-64 GSE104059.BRD1.HUES-64 239 bp overlap

ChIP HUES-64 GSE104059.BRD1.HUES-64 166 bp overlap

ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 190 bp overlap

ChIP WTC11 ENCFF113HIY 324 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 506 bp overlap

CHD7 2 datasets

ChIP WA01 ENCSR000AVA.CHD7.WA01 280 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 239 bp overlap

CREB1 2 datasets

ChIP GM23338 ENCFF432ZEW 305 bp overlap

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 331 bp overlap

CREM 2 datasets

ChIP WTC11 ENCFF209ZUE 446 bp overlap

ChIP WTC11 ENCFF209ZUE 317 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 403 bp overlap

CTCF 3 datasets

ChIP HCT-116 GSE131606.CTCF.HCT-116 281 bp overlap

ChIP HT-1080 GSE135580.CTCF.HT-1080 506 bp overlap

ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 246 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF274GAT 83 bp overlap

ChIP WTC11 ENCFF449LLF 451 bp overlap

EBF1 3 datasets

ChIP GM12878 ENCFF167CZS 321 bp overlap

ChIP MUTUL GSE75503.EBF1.MUTUL 176 bp overlap

ChIP NALM-6 GSE126300.EBF1.NALM-6 323 bp overlap

EMSY 2 datasets

ChIP K562 ENCFF511ZZZ 197 bp overlap

ChIP K562 ENCFF511ZZZ 71 bp overlap

ChIP WTC11 ENCFF692RZJ 67 bp overlap

EP300 2 datasets

ChIP H1 ENCFF927IYK 297 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 230 bp overlap

ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 216 bp overlap

ESRRA 1 dataset

ChIP WTC11 ENCFF591YCA 313 bp overlap

ETS1 3 datasets

ChIP GM23338 ENCFF701IZH 325 bp overlap

ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 294 bp overlap

ChIP hESC ENCSR534VHI.ETS1.hESC 323 bp overlap

ChIP WTC11 ENCFF812SCD 354 bp overlap

ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 442 bp overlap

FOXK1 2 datasets

ChIP WTC11 ENCFF875IGU 378 bp overlap

ChIP WTC11 ENCFF875IGU 319 bp overlap

FOXP1 2 datasets

ChIP H9 GSE31006.FOXP1.H9 324 bp overlap

ChIP WTC11 ENCFF338WGC 374 bp overlap

FOXP4 1 dataset

ChIP WTC11 ENCFF708TAF 370 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 358 bp overlap

HDAC2 4 datasets

ChIP H1 ENCFF353UJQ 496 bp overlap

ChIP H1 ENCFF939VKA 237 bp overlap

ChIP WA01 ENCSR000AVB.HDAC2.WA01 286 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 196 bp overlap

ChIP DE_D1 S08-DE-d1-JUN-exp1 346 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 269 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 453 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 419 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 453 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 393 bp overlap

KLF4 3 datasets

ChIP WA09 GSE105028.KLF4.WA09 247 bp overlap

ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 266 bp overlap

ChIP hiPSC GSE56567.KLF4.hiPSC 179 bp overlap

MAFF 5 datasets

ChIP HeLa-S3 ENCFF783SBT 171 bp overlap

ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 209 bp overlap

ChIP HepG2 ENCFF452YUT 177 bp overlap

ChIP K-562 ENCSR000EGI.MAFF.K-562 135 bp overlap

ChIP K562 ENCFF071YKK 190 bp overlap

MAFG 2 datasets

ChIP K-562 ENCSR818DQV.MAFG.K-562 262 bp overlap

ChIP K562 ENCFF455EEO 268 bp overlap

MAFK 12 datasets

ChIP A549 ENCFF371EPR 210 bp overlap

ChIP H1 ENCFF854XWE 201 bp overlap

ChIP HeLa-S3 ENCFF304XGR 187 bp overlap

ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 131 bp overlap

ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 134 bp overlap

ChIP HepG2 ENCFF743ZOF 164 bp overlap

ChIP HepG2 ENCFF767LDG 175 bp overlap

ChIP IMR-90 ENCFF336DHZ 170 bp overlap

ChIP K-562 ENCSR000EGX.MAFK.K-562 122 bp overlap

ChIP K562 ENCFF380WHM 182 bp overlap

ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 201 bp overlap

ChIP WA01 ENCSR000EBS.MAFK.WA01 281 bp overlap

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 366 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 242 bp overlap

MYBL2 2 datasets

ChIP WTC11 ENCFF166TKT 362 bp overlap

ChIP WTC11 ENCFF166TKT 341 bp overlap

NANOG 11 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 340 bp overlap

ChIP H1 ENCFF747ZPQ 241 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 506 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 398 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 250 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 466 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 487 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 425 bp overlap

ChIP hESC GSE20650.NANOG.hESC 294 bp overlap

ChIP hESC GSE18292.NANOG.hESC 211 bp overlap

NFE2L1 2 datasets

ChIP WTC11 ENCFF644BPU 323 bp overlap

ChIP WTC11 ENCFF644BPU 353 bp overlap

NIPBL 5 datasets

ChIP WA09 GSE105028.NIPBL.WA09 343 bp overlap

ChIP hESC GSE64758.NIPBL.hESC 255 bp overlap

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 269 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 336 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 256 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 258 bp overlap

ChIP K562 ENCFF791UHF 232 bp overlap

ChIP WTC11 ENCFF634NAO 245 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 288 bp overlap

PHF8 2 datasets

ChIP H1 ENCFF427UFV 271 bp overlap

ChIP WA01 ENCSR000ATK.PHF8.WA01 84 bp overlap

POLR2A 5 datasets

ChIP GM23338 ENCFF450WCS 285 bp overlap

ChIP H1 ENCFF566JSR 311 bp overlap

ChIP H1 ENCFF770YBQ 356 bp overlap

ChIP H1 ENCFF833NJP 147 bp overlap

ChIP H1 ENCFF833NJP 411 bp overlap

POU5F1 11 datasets

ChIP BG03 GSE21614.POU5F1.BG03 160 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 348 bp overlap

ChIP GM23338 ENCFF333SNB 311 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 491 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 480 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 237 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 316 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 305 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 455 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 325 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 151 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 313 bp overlap

PRDM14 1 dataset

ChIP NCCIT GSE71675.PRDM14.NCCIT 197 bp overlap

PRDM15 1 dataset

ChIP WTC11 ENCFF108TMF 401 bp overlap

PRRX2 1 dataset

ChIP WTC11 ENCFF107JGJ 228 bp overlap

RAD21 2 datasets

ChIP WA09 GSE105028.RAD21.WA09 331 bp overlap

ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 405 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 196 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 506 bp overlap

ChIP GM23338 ENCFF024TCL 251 bp overlap

ChIP WTC11 ENCFF891HYW 377 bp overlap

SMAD2 3 datasets

ChIP hESC GSE29422.SMAD2.hESC 204 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 360 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 286 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 450 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 415 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 322 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 498 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 441 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 260 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 440 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 301 bp overlap

ChIP ESC S23-ESC-d0-SMAD2_3-exp1 365 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 472 bp overlap

SMAD3 6 datasets

ChIP BG03 GSE21614.SMAD3.BG03 271 bp overlap

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 291 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 216 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 218 bp overlap

ChIP hESC GSE75297.SMAD3.hESC 212 bp overlap

ChIP hESC_DIFF_D1 GSE75297.SMAD3.hESC_DIFF_D1 180 bp overlap

SMARCA4 4 datasets

ChIP WA09 GSE105028.SMARCA4.WA09 295 bp overlap

ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 286 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 451 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 482 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 303 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 352 bp overlap

SMARCC1 4 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 251 bp overlap

ChIP ESC S25-ESC-d0-BAF155-exp1 465 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 403 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 506 bp overlap

SOX2 4 datasets

ChIP H9 GSE46837.SOX2.H9 156 bp overlap

ChIP hESC GSE69479.SOX2.hESC 214 bp overlap

ChIP hESC GSE18292.SOX2.hESC 145 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 348 bp overlap

ChIP H1 ENCFF263FUH 321 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 372 bp overlap

ChIP WTC11 ENCFF688PEU 416 bp overlap

ChIP WA01 ENCSR000BQV.SP4.WA01 286 bp overlap

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 226 bp overlap

TAF1 2 datasets

ChIP H1 ENCFF478SZO 385 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 489 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 324 bp overlap

ChIP hESC GSE122298.TBP.hESC 449 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 232 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 329 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 306 bp overlap

ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 235 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 309 bp overlap

ChIP NPC GSE154479.TCF3.NPC 295 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 320 bp overlap

TEAD4 2 datasets

ChIP ESC S26-ESC-d0-TEAD4-exp1 310 bp overlap

ChIP hESC GSE99202.TEAD4.hESC 199 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 506 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 506 bp overlap

TGIF2 2 datasets

ChIP WTC11 ENCFF649SHI 338 bp overlap

ChIP WTC11 ENCFF649SHI 405 bp overlap

TP53 3 datasets

ChIP WTC11 ENCFF359JCU 79 bp overlap

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 211 bp overlap

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 297 bp overlap

TRIM28 1 dataset

ChIP hESC GSE115387.TRIM28.hESC 303 bp overlap

USF1 2 datasets

ChIP WA01 ENCSR000BIU.USF1.WA01 336 bp overlap

ChIP WTC11 ENCFF699QGS 310 bp overlap

ChIP WTC11 ENCFF139JAW 243 bp overlap

ChIP H1 ENCFF524BTL 337 bp overlap

ChIP H1 ENCFF524BTL 298 bp overlap

ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 187 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 415 bp overlap

ZBTB43 1 dataset

ChIP WTC11 ENCFF058JUB 381 bp overlap

ZNF143 1 dataset

ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 237 bp overlap

ZNF184 1 dataset

ChIP WTC11 ENCFF352POG 329 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 427 bp overlap

ZNF281 1 dataset

ChIP WTC11 ENCFF551GAV 306 bp overlap

ZNF316 1 dataset

ChIP K562 ENCFF838QCD 195 bp overlap

ZNF331 1 dataset

ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 146 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 312 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 352 bp overlap