chr13 : 39,329,146 39,329,371
225 bp 114 TFs 0 linked genes
This 225 bp open chromatin element has no linked target genes and is bound by 114 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:39,324,146 – 39,334,371
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
114 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 225 bp overlap
ASH2L 4 datasets
ChIP H1 ENCFF399KAM 225 bp overlap
ChIP H1 ENCFF399KAM 225 bp overlap
ChIP H1 ENCFF399KAM 134 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 225 bp overlap
ATF2 3 datasets
ChIP H1 ENCFF295GZO 225 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 84 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 225 bp overlap
BCL11A 2 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 225 bp overlap
BCL6B 1 dataset
ChIP HEK293 ENCFF555YRB 59 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 225 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 167 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 179 bp overlap
BRD4 1 dataset
ChIP CHL-1 GSE95585.BRD4.CHL-1 57 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 130 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 225 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 172 bp overlap
CREB1 6 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 225 bp overlap
ChIP MCF-7 ENCFF341ZEM 166 bp overlap
ChIP MCF-7 ENCFF867SAS 145 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 93 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 70 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 192 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 225 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 225 bp overlap
CTNNB1 1 dataset
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 198 bp overlap
EP300 6 datasets
ChIP H1 ENCFF927IYK 225 bp overlap
ChIP HeLa-S3 ENCFF089VPQ 76 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 54 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 225 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 176 bp overlap
ChIP hESC GSE17917.EP300.hESC 213 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 177 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 225 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 138 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 200 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 225 bp overlap
GATA4 3 datasets
ChIP ESO-26 GSE132813.GATA4.ESO-26 102 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 225 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 55 bp overlap
GATA6 3 datasets
ChIP AGS GSE51705.GATA6.AGS 225 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 74 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 132 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 225 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 225 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 177 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 129 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 225 bp overlap
ChIP H1 ENCFF939VKA 202 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 223 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 193 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 154 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 104 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 118 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 225 bp overlap
JUN 5 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 225 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 225 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 225 bp overlap
ChIP H1 ENCFF621PNP 164 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 225 bp overlap
JUND 3 datasets
ChIP H1 ENCFF010YXS 225 bp overlap
ChIP H1 ENCFF010YXS 100 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 148 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 128 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 158 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 179 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 90 bp overlap
LEF1 2 datasets
ChIP hESC GSE64758.LEF1.hESC 185 bp overlap
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 195 bp overlap
MAFK 2 datasets
ChIP H1 ENCFF854XWE 132 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 175 bp overlap
MAX 2 datasets
ChIP H1 ENCFF601FOM 107 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 61 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 225 bp overlap
MED1 4 datasets
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 225 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 184 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 214 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 223 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 225 bp overlap
NANOG 12 datasets
ChIP GM23338 ENCFF065NZG 220 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 225 bp overlap
ChIP H1 ENCFF747ZPQ 96 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 225 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 225 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 225 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 225 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 225 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 225 bp overlap
ChIP hESC GSE20650.NANOG.hESC 225 bp overlap
ChIP hESC GSE18292.NANOG.hESC 99 bp overlap
ChIP hESC GSE18292.NANOG.hESC 60 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 184 bp overlap
NFIB 1 dataset
Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap
NFIC 1 dataset
Motif ES_0h ES_0h-NFIC_MA1527.2 15 bp overlap
NFIX 1 dataset
Motif ES_0h ES_0h-NFIX_MA1528.2 14 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 180 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 206 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 189 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 189 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 138 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 197 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 161 bp overlap
POU5F1 13 datasets
ChIP GM23338 ENCFF333SNB 225 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 225 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 225 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 225 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 182 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 225 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 225 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 225 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 224 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 225 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 225 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 225 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 66 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCFF069PHD 96 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 134 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 156 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 77 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 225 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 225 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 225 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 225 bp overlap
RELA 3 datasets
ChIP HAEC GSE89970.RELA.HAEC 80 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 111 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 57 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 117 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 225 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 225 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 225 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 225 bp overlap
SMAD3 4 datasets
ChIP BG03 GSE21614.SMAD3.BG03 173 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 225 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 164 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 143 bp overlap
SMARCA4 5 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 225 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 225 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 225 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 225 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 225 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 119 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 225 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 200 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 225 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 225 bp overlap
SOX2 10 datasets
ChIP H9 GSE46837.SOX2.H9 224 bp overlap
ChIP HCC95 GSE137459.SOX2.HCC95 94 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 225 bp overlap
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 212 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 126 bp overlap
ChIP hESC GSE69479.SOX2.hESC 225 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hESC GSE18292.SOX2.hESC 56 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 225 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 225 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 225 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 225 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 151 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 187 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 213 bp overlap
TCF7L2 3 datasets
ChIP HEK293 ENCFF513JQN 152 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 93 bp overlap
ChIP HeLa-S3 ENCFF673QAB 148 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 225 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 225 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 174 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 225 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 182 bp overlap
TRIM28 5 datasets
ChIP HEK293 ENCFF265CEM 225 bp overlap
ChIP HEK293 ENCFF582MWI 225 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 134 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 115 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 134 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 209 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 195 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 225 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 189 bp overlap
ZBTB12 1 dataset
ChIP HEK293 ENCFF963HPT 106 bp overlap
ZBTB21 2 datasets
ChIP HEK293 ENCFF509WYZ 127 bp overlap
ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 211 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 164 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 67 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 111 bp overlap
ZBTB49 1 dataset
ChIP HEK293 ENCFF692IDD 79 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 106 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 152 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCFF007TAP 60 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 118 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 88 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCFF611ZJI 125 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 134 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 87 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 181 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 225 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 184 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 173 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 225 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 170 bp overlap
ZNF324 1 dataset
ChIP HEK293 ENCFF062DPE 124 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 86 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 94 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 225 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 184 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 102 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 125 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 197 bp overlap
ZNF449 1 dataset
ChIP HEK293 ENCFF764ZIC 151 bp overlap
ZNF488 1 dataset
ChIP HEK293 ENCFF780TIG 104 bp overlap
ZNF518A 2 datasets
ChIP HEK293 ENCFF892ULS 107 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 54 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 225 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 165 bp overlap
ZNF558 1 dataset
ChIP HEK293 ENCFF994JWH 56 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 93 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 64 bp overlap
ZNF610 2 datasets
ChIP HEK293 ENCFF778UKJ 82 bp overlap
ChIP HEK293 ENCSR691TXI.ZNF610.HEK293 78 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCFF096ELQ 193 bp overlap
ZNF639 2 datasets
ChIP HEK293 ENCFF971ZNH 94 bp overlap
ChIP HEK293 ENCSR080CST.ZNF639.HEK293 75 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCFF282RUS 93 bp overlap
ZNF664 1 dataset
ChIP HEK293 ENCFF343XSW 117 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 59 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 111 bp overlap
ZSCAN21 2 datasets
ChIP HEK293 ENCFF582WUP 76 bp overlap
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 61 bp overlap
ZSCAN23 1 dataset
ChIP HEK293 ENCFF127TFV 112 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCFF082YBI 80 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 94 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 168 bp overlap