chr11 : 35,330,237 35,331,541
1,304 bp 105 TFs 2 linked genes
This 1.3 kb open chromatin element is linked to PDHX and APIP and is bound by 105 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PDHX 414.3 kb Distal Multiome+HiCAR
APIP 414.5 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:35,325,237 – 35,336,541
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
105 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 273 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 310 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 608 bp overlap
BCL11B 1 dataset
ChIP PBMC_T-reg GSE120872.BCL11B.PBMC_T-reg 204 bp overlap
BCL6 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 230 bp overlap
ChIP CD4 GSE59933.BCL6.CD4 265 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 153 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 315 bp overlap
BRD4 12 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 722 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 200 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 251 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 183 bp overlap
ChIP HEK293_sgMYOD GSE129407.BRD4.HEK293_sgMYOD 215 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 392 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 289 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 176 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 596 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 330 bp overlap
ChIP T-cell_iBET-BD1 GSE138084.BRD4.T-cell_iBET-BD1 314 bp overlap
ChIP T-cell_iBET-BD2 GSE138084.BRD4.T-cell_iBET-BD2 270 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 255 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 235 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 218 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 337 bp overlap
CTCF 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 151 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 252 bp overlap
DEAF1 1 dataset
ChIP keratinocyte GSE129965.DEAF1.keratinocyte 192 bp overlap
E2F4 1 dataset
ChIP HeLa-S3 ENCFF669WYW 431 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 192 bp overlap
EGR1 2 datasets
Motif DE_48h DE_48h-EGR1_MA0162.5 10 bp overlap
ChIP macrophage_D3 GSE136216.EGR1.macrophage_D3 208 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 205 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 232 bp overlap
ETS1 1 dataset
ChIP CD4-pos GSE146787.ETS1.CD4-pos 546 bp overlap
ETV2 1 dataset
Motif DE_48h DE_48h-ETV2_MA0762.2 9 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 1176 bp overlap
ChIP DE DE-FOXA2-2 1082 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 1304 bp overlap
ChIP DE DE-GATA4-2 1259 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 586 bp overlap
GATA6 12 datasets
ChIP AGS GSE51936.GATA6.AGS 146 bp overlap
ChIP DE DE-GATA6-1 1020 bp overlap
ChIP DE DE-GATA6-1 122 bp overlap
ChIP DE DE-GATA6-2 1211 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 311 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 685 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 1180 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 931 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 850 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 1123 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 447 bp overlap
ChIP foregut GSE117136.GATA6.foregut 280 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 279 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 645 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
HSF1 4 datasets
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 398 bp overlap
ChIP MO91 GSE45852.HSF1.MO91 189 bp overlap
ChIP U2OS_HEAT GSE60984.HSF1.U2OS_HEAT 98 bp overlap
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 560 bp overlap
HSF2 1 dataset
Motif DE_48h DE_48h-HSF2_MA0770.1 13 bp overlap
IKZF1 2 datasets
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 307 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 214 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 450 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 419 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 181 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 505 bp overlap
KLF1 1 dataset
Motif DE_48h DE_48h-KLF1_MA0493.3 8 bp overlap
KLF11 1 dataset
Motif DE_48h DE_48h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_48h DE_48h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_48h DE_48h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_48h DE_48h-KLF4_MA0039.5 8 bp overlap
KLF5 3 datasets
Motif DE_48h DE_48h-KLF5_MA0599.1 10 bp overlap
ChIP HCC95 GSE88976.KLF5.HCC95 267 bp overlap
ChIP HCC95 GSE88976.KLF5.HCC95 266 bp overlap
KLF6 1 dataset
Motif DE_48h DE_48h-KLF6_MA1517.2 9 bp overlap
KLF9 1 dataset
Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 248 bp overlap
MAX 7 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 399 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 375 bp overlap
ChIP P493-6_4HR GSE125863.MAX.P493-6_4HR 337 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 452 bp overlap
ChIP P493-6_CMYC_24H GSE36354.MAX.P493-6_CMYC_24H 345 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 336 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 313 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 334 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 238 bp overlap
MYC 3 datasets
ChIP P493-6 GSE77061.MYC.P493-6 288 bp overlap
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 299 bp overlap
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 137 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 578 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 489 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 198 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 415 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 257 bp overlap
NUTM1 2 datasets
ChIP NMC24335 GSE96775.NUTM1.NMC24335 898 bp overlap
ChIP NMC24335 GSE96775.NUTM1.NMC24335 293 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POLR2A 4 datasets
ChIP GM12878 ENCFF521FXC 561 bp overlap
ChIP GM23338 ENCFF450WCS 491 bp overlap
ChIP H1 ENCFF833NJP 220 bp overlap
ChIP spleen ENCFF044PYR 205 bp overlap
POU5F1 9 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 573 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 273 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 198 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 190 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 193 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 372 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 264 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 309 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 550 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.RAD21.THP-1_Pam3csk-180m-Flavo-060m 207 bp overlap
RAD51 2 datasets
ChIP GM12878 ENCFF916JXQ 441 bp overlap
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 318 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 385 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 372 bp overlap
RNF2 1 dataset
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 328 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 207 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 401 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 551 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 389 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1271 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 793 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 685 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 1042 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 682 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1136 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 803 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 169 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 224 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 288 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 502 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 347 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 232 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 436 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 1025 bp overlap
SOX2 3 datasets
ChIP hESC GSE69479.SOX2.hESC 229 bp overlap
ChIP hESC GSE18292.SOX2.hESC 171 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 317 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 378 bp overlap
SP3 1 dataset
Motif DE_48h DE_48h-SP3_MA0746.3 11 bp overlap
SP8 1 dataset
Motif DE_48h DE_48h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_48h DE_48h-SP9_MA1564.2 10 bp overlap
SPI1 9 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 257 bp overlap
ChIP GM12878 ENCFF134LCP 297 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 89 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 184 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 149 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 188 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 213 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 176 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 188 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 189 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 142 bp overlap
STAT3 2 datasets
ChIP A-137 GSE85579.STAT3.A-137 203 bp overlap
Motif DE_48h DE_48h-STAT3_MA0144.3 9 bp overlap
STAT5B 1 dataset
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 232 bp overlap
TBX21 4 datasets
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 302 bp overlap
ChIP GM12878 ENCFF951HUW 485 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 716 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 345 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 214 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 511 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 661 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 249 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 259 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 317 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 204 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 402 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 360 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 161 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 237 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 314 bp overlap
ZNF317 1 dataset
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 553 bp overlap
ZNF532 2 datasets
ChIP NMC24335 GSE96775.ZNF532.NMC24335 686 bp overlap
ChIP NMC24335 GSE96775.ZNF532.NMC24335 354 bp overlap
ZNF768 1 dataset
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
ZNF93 1 dataset
Motif DE_48h DE_48h-ZNF93_MA1721.2 14 bp overlap