chr1 : 174,953,794 174,953,961
167 bp 102 TFs 1 linked gene
This 167 bp open chromatin element is linked to RABGAP1L-AS1 and is bound by 102 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RABGAP1L-AS1 299 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:174,948,794 – 174,958,961
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 167 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 167 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 167 bp overlap
ARID3A 3 datasets
ChIP Hep-G2 ENCSR000EDP.ARID3A.Hep-G2 82 bp overlap
ChIP HepG2 ENCFF122GLS 167 bp overlap
ChIP HepG2 ENCFF341DES 167 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 167 bp overlap
ARNT 2 datasets
ChIP GM12878 ENCFF831TWO 167 bp overlap
ChIP GM12878 ENCSR590KEQ.ARNT.GM12878 167 bp overlap
ASH2L 1 dataset
ChIP HepG2 ENCFF207QHL 167 bp overlap
ATF7 3 datasets
ChIP GM12878 ENCFF037PYH 167 bp overlap
ChIP GM12878 ENCFF037PYH 167 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 167 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 160 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 127 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 167 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCFF854PAY 167 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 118 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCFF521IZR 68 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 72 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 167 bp overlap
BRD4 2 datasets
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 125 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 124 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 76 bp overlap
CEBPA 2 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 167 bp overlap
ChIP HepG2 ENCFF175DFS 151 bp overlap
CEBPB 2 datasets
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 164 bp overlap
ChIP HepG2 ENCFF536NTI 167 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 127 bp overlap
CHD2 1 dataset
ChIP GM12878 ENCFF697XCL 167 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 167 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCFF870CVH 87 bp overlap
ChIP HepG2 ENCFF576ERP 167 bp overlap
CREM 1 dataset
ChIP GM12878 ENCFF391UGE 163 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 167 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 167 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCFF910KAC 167 bp overlap
EBF1 5 datasets
ChIP GM12878 ENCFF167CZS 167 bp overlap
ChIP GM12878 ENCFF813OXE 167 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 167 bp overlap
ChIP LCL GSE75503.EBF1.LCL 167 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 167 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 167 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCFF692SMY 167 bp overlap
ChIP GM12878 ENCFF692SMY 131 bp overlap
EP300 4 datasets
ChIP GM12878 ENCFF039QRE 167 bp overlap
ChIP GM12878 ENCFF242HCG 167 bp overlap
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 93 bp overlap
ChIP HepG2 ENCFF354ACD 167 bp overlap
ESR1 5 datasets
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 155 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 167 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 167 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 167 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 64 bp overlap
ESRRA 3 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 167 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 167 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 167 bp overlap
FOXA1 29 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 92 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 87 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 167 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 167 bp overlap
ChIP HepG2 ENCFF207NVJ 118 bp overlap
ChIP HepG2 ENCFF361KNY 167 bp overlap
ChIP HepG2 ENCFF740VZW 115 bp overlap
ChIP Huh-7_ASYNC GSE39241.FOXA1.Huh-7_ASYNC 93 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 108 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 96 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 167 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 167 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 105 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 100 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 101 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 167 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 113 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 138 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 167 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 167 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 167 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 167 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 61 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 156 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 148 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 116 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 70 bp overlap
ChIP liver ERP002306.FOXA1.liver 126 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 162 bp overlap
FOXA2 12 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 82 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 167 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 162 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 106 bp overlap
ChIP DE DE-FOXA2-1 167 bp overlap
ChIP DE DE-FOXA2-2 167 bp overlap
ChIP HepG2 ENCFF533COJ 111 bp overlap
ChIP HepG2 ENCFF570ABM 167 bp overlap
ChIP HepG2 ENCFF894AYY 103 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 96 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 131 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 167 bp overlap
FOXP1 4 datasets
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 77 bp overlap
ChIP HepG2 ENCFF823ERM 167 bp overlap
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 99 bp overlap
ChIP U2932 ERP010999.FOXP1.U2932 91 bp overlap
FOXP4 2 datasets
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 167 bp overlap
ChIP HepG2 ENCFF462ULY 167 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF437NQS 167 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-2 167 bp overlap
ChIP ESO-26 GSE132813.GATA4.ESO-26 84 bp overlap
ChIP foregut GSE117136.GATA4.foregut 167 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 167 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 167 bp overlap
GATA6 5 datasets
ChIP ESO-26 GSE132680.GATA6.ESO-26 167 bp overlap
ChIP foregut GSE117136.GATA6.foregut 167 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 91 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 167 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 167 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 135 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 167 bp overlap
ChIP GM12878 ENCFF781IAU 167 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF304IEJ 167 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCFF881POI 167 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 167 bp overlap
HMG20A 1 dataset
ChIP HepG2 ENCFF599VWU 167 bp overlap
HNF4A 12 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 164 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 126 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 167 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 167 bp overlap
ChIP Hep-G2 ENCSR000EEU.HNF4A.Hep-G2 167 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 93 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 73 bp overlap
ChIP HepG2 ENCFF146SSF 83 bp overlap
ChIP HepG2 ENCFF669NAM 157 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 100 bp overlap
ChIP liver ENCFF449HPV 116 bp overlap
ChIP liver ERP002306.HNF4A.liver 88 bp overlap
HNF4G 2 datasets
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 75 bp overlap
ChIP HepG2 ENCFF323ATZ 154 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 167 bp overlap
ChIP GM12878 ENCFF824TGK 167 bp overlap
IKZF2 5 datasets
ChIP GM12878 ENCFF238LYK 167 bp overlap
ChIP GM12878 ENCFF238LYK 167 bp overlap
ChIP GM12878 ENCFF918AID 167 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 167 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 167 bp overlap
IRF4 2 datasets
ChIP GM12878 ENCFF769ZDL 167 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 102 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCFF667EJQ 159 bp overlap
KDM1A 4 datasets
ChIP HepG2 ENCFF240UWG 167 bp overlap
ChIP HepG2 ENCFF240UWG 167 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 89 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 167 bp overlap
MAX 1 dataset
ChIP liver ENCFF584QGB 67 bp overlap
MAZ 1 dataset
ChIP GM12878 ENCFF453CES 167 bp overlap
MEF2A 1 dataset
ChIP GM12878 ENCFF652BHX 88 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 167 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 164 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 167 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 167 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 167 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 108 bp overlap
NBN 1 dataset
ChIP GM12878 ENCFF213ZNN 124 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 112 bp overlap
NFATC3 3 datasets
ChIP GM12878 ENCFF340KVJ 167 bp overlap
ChIP GM12878 ENCFF340KVJ 167 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 167 bp overlap
NFIC 3 datasets
ChIP GM12878 ENCFF259FWL 167 bp overlap
ChIP GM12878 ENCFF259FWL 167 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 167 bp overlap
NR2F1 4 datasets
ChIP GM12878 ENCFF273VKX 167 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 167 bp overlap
ChIP HepG2 ENCFF518ZRY 167 bp overlap
ChIP K562 ENCFF221HJH 91 bp overlap
NR2F2 4 datasets
ChIP Hep-G2 ENCSR000BVM.NR2F2.Hep-G2 94 bp overlap
ChIP HepG2 ENCFF483TVJ 167 bp overlap
ChIP MCF-7 ENCFF329FZB 167 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 85 bp overlap
NR2F6 3 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 167 bp overlap
ChIP HepG2 ENCFF429VKC 167 bp overlap
ChIP HepG2 ENCFF514UJI 167 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 167 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 100 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 167 bp overlap
PATZ1 2 datasets
ChIP HepG2 ENCFF723PFC 132 bp overlap
ChIP HepG2 ENCFF723PFC 167 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 88 bp overlap
ChIP HepG2 ENCFF526NOJ 167 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 69 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 167 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 101 bp overlap
PPARG 1 dataset
ChIP HepG2 ENCFF329FBJ 167 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 167 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 167 bp overlap
RELA 2 datasets
ChIP GM12878 ENCFF513IEN 147 bp overlap
ChIP GM19099 ENCSR000EBI.RELA.GM19099 141 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 167 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 167 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 167 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 118 bp overlap
SKI 1 dataset
ChIP HepG2 ENCFF631IPX 167 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 137 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 167 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 108 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 95 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 167 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 73 bp overlap
ChIP HepG2 ENCFF767OCK 167 bp overlap
SP1 2 datasets
ChIP GM12878 ENCSR000BHK.SP1.GM12878 95 bp overlap
ChIP Hep-G2 ENCSR000BJX.SP1.Hep-G2 91 bp overlap
STAT3 1 dataset
ChIP B-cell GSE123398.STAT3.B-cell 50 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCFF866POT 83 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCFF951HUW 167 bp overlap
TCF12 5 datasets
ChIP GM12878 ENCFF433DMU 153 bp overlap
ChIP GM12878 ENCFF433DMU 152 bp overlap
ChIP GM12878 ENCFF506WWB 167 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 167 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 160 bp overlap
TCF4 1 dataset
ChIP LS180_125 GSE31939.TCF4.LS180_125 90 bp overlap
TCF7 2 datasets
ChIP GM12878 ENCFF749DPM 167 bp overlap
ChIP HepG2 ENCFF628OFQ 167 bp overlap
TCF7L2 1 dataset
ChIP HepG2 ENCFF510OLG 143 bp overlap
TEAD1 1 dataset
ChIP HepG2 ENCFF661PNM 167 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 167 bp overlap
TEAD4 1 dataset
ChIP HepG2 ENCFF006QNB 167 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 167 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 167 bp overlap
TFAP4 1 dataset
ChIP HepG2 ENCFF932XOY 167 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCFF919OMX 86 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 96 bp overlap
YBX1 1 dataset
ChIP GM12878 ENCFF641EEK 155 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCFF007OSW 167 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 167 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 167 bp overlap