chr6 : 170,464,430 170,465,017
587 bp 134 TFs 1 linked gene
This 587 bp open chromatin element is linked to ENSG00000288970 and is bound by 134 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000288970 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:170,459,430 – 170,470,017
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
134 transcription factors
Source
Cell type
ARNT 2 datasets
ChIP GM12878 ENCFF831TWO 505 bp overlap
ChIP GM12878 ENCSR590KEQ.ARNT.GM12878 271 bp overlap
ASCL1 1 dataset
Motif DE_24h DE_24h-ASCL1_MA1631.2 9 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 495 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 587 bp overlap
BACH1 2 datasets
ChIP GM12878 ENCFF576UEQ 365 bp overlap
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 472 bp overlap
BCL3 2 datasets
ChIP GM12878 ENCFF854PAY 322 bp overlap
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 267 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF521IZR 385 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 550 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 519 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 285 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 475 bp overlap
CHD2 1 dataset
ChIP GM12878 ENCFF697XCL 381 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 441 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 146 bp overlap
CTCF 3 datasets
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 124 bp overlap
CTCFL 1 dataset
Motif DE_24h DE_24h-CTCFL_MA1102.3 8 bp overlap
CTNNB1 2 datasets
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 182 bp overlap
ChIP hiPSC_TT-neg_D2 GSE132532.CTNNB1.hiPSC_TT-neg_D2 310 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 266 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 437 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 587 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 144 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF167CZS 282 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 227 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 240 bp overlap
EED 2 datasets
ChIP GM12878 ENCFF266FYW 473 bp overlap
ChIP GM12878 ENCFF266FYW 393 bp overlap
EGR1 5 datasets
ChIP GM12878 ENCFF092DJY 114 bp overlap
ChIP GM12878 ENCSR000BMQ.EGR1.GM12878 208 bp overlap
ChIP GM12878 ENCSR000BRG.EGR1.GM12878 195 bp overlap
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 298 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 277 bp overlap
EOMES 1 dataset
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
EP300 3 datasets
ChIP GM12878 ENCFF039QRE 351 bp overlap
ChIP GM12878 ENCFF039QRE 324 bp overlap
ChIP GM12878 ENCFF242HCG 361 bp overlap
ESR1 1 dataset
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 247 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 554 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 146 bp overlap
EZH2 1 dataset
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 305 bp overlap
FIGLA 2 datasets
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
FOXK2 1 dataset
ChIP GM12878 ENCFF546FJN 417 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 587 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 587 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 587 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 587 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 587 bp overlap
GATAD2B 3 datasets
ChIP GM12878 ENCFF781IAU 375 bp overlap
ChIP GM12878 ENCFF781IAU 182 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 587 bp overlap
Hnf1A 1 dataset
Motif DE_24h DE_24h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 587 bp overlap
ChIP GM12878 ENCFF824TGK 587 bp overlap
IKZF2 5 datasets
ChIP GM12878 ENCFF238LYK 519 bp overlap
ChIP GM12878 ENCFF238LYK 586 bp overlap
ChIP GM12878 ENCFF918AID 518 bp overlap
ChIP GM12878 ENCFF918AID 587 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 587 bp overlap
IRF4 2 datasets
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 270 bp overlap
ChIP OCI-Ly3 GSE142493.IRF4.OCI-Ly3 197 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 587 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 537 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 587 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 587 bp overlap
KMT2A 3 datasets
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 98 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 326 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 193 bp overlap
LARP7 1 dataset
ChIP GM12878 ENCFF513CEX 395 bp overlap
Lef1 1 dataset
Motif DE_24h DE_24h-Lef1_MA0768.3 8 bp overlap
MAZ 4 datasets
Motif DE_24h DE_24h-MAZ_MA1522.2 8 bp overlap
ChIP GM12878 ENCFF404CEP 388 bp overlap
ChIP GM12878 ENCFF404CEP 343 bp overlap
ChIP GM12878 ENCFF453CES 433 bp overlap
MED1 2 datasets
ChIP GM12878 GSE93080.MED1.GM12878 218 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 264 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 587 bp overlap
MEIS1 1 dataset
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
MGA::EVX1 2 datasets
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 128 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 587 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 375 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 587 bp overlap
Msgn1 1 dataset
Motif DE_24h DE_24h-Msgn1_MA1524.3 10 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 408 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 587 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 532 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 572 bp overlap
NFIX 1 dataset
Motif DE_24h DE_24h-NFIX_MA1528.2 14 bp overlap
NKRF 1 dataset
ChIP GM12878 ENCFF392NLB 431 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 345 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 269 bp overlap
NR2C2 1 dataset
Motif DE_24h DE_24h-NR2C2_MA0504.2 14 bp overlap
NR2F1 3 datasets
Motif DE_24h DE_24h-NR2F1_MA1537.2 13 bp overlap
ChIP GM12878 ENCFF273VKX 310 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 587 bp overlap
Nr2f6 1 dataset
Motif DE_24h DE_24h-Nr2f6_MA0677.2 13 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCFF503GOV 305 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 246 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 257 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 187 bp overlap
PLAGL2 1 dataset
Motif DE_24h DE_24h-PLAGL2_MA1548.2 8 bp overlap
POU2F2 1 dataset
ChIP GM12878 ENCFF207RKY 321 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 320 bp overlap
PRDM9 2 datasets
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Plagl1 1 dataset
Motif DE_24h DE_24h-Plagl1_MA1615.2 8 bp overlap
Ptf1A 2 datasets
Motif DE_24h DE_24h-Ptf1A_MA1620.2 8 bp overlap
Motif DE_24h DE_24h-Ptf1A_MA1620.2 8 bp overlap
RARA 1 dataset
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 587 bp overlap
RELA 11 datasets
ChIP BJAB_1h-activation GSE117250.RELA.BJAB_1h-activation 209 bp overlap
ChIP BJAB_4h-activation GSE117250.RELA.BJAB_4h-activation 180 bp overlap
Motif DE_24h DE_24h-RELA_MA0107.1 10 bp overlap
ChIP GM12878 ENCFF513IEN 311 bp overlap
ChIP GM12878 ENCFF513IEN 311 bp overlap
ChIP GM12878 ENCSR664POU.RELA.GM12878 535 bp overlap
ChIP GM12878 ENCSR000EAG.RELA.GM12878 228 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 321 bp overlap
ChIP GM19099 ENCSR000EBI.RELA.GM19099 176 bp overlap
ChIP GM19193 ENCSR000EBM.RELA.GM19193 124 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 481 bp overlap
RELB 1 dataset
ChIP GM12878 ENCFF217ADF 587 bp overlap
RNF2 1 dataset
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 240 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 340 bp overlap
RXRB 1 dataset
Motif DE_24h DE_24h-RXRB_MA0855.1 14 bp overlap
Rxra 1 dataset
Motif DE_24h DE_24h-Rxra_MA0512.2 14 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 313 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 505 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 403 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 587 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 587 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 587 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 587 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 587 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 375 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 587 bp overlap
SNAI1 1 dataset
Motif DE_24h DE_24h-SNAI1_MA1558.2 7 bp overlap
SNAI3 1 dataset
Motif DE_24h DE_24h-SNAI3_MA1559.2 9 bp overlap
SP1 3 datasets
ChIP GM12878 ENCFF620LDJ 321 bp overlap
ChIP GM12878 ENCSR000BHK.SP1.GM12878 219 bp overlap
ChIP GM12878 ENCSR000BHK.SP1.GM12878 119 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 368 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5843 GSE126004.STAT3.MCF-7_jc5843 227 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 471 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 587 bp overlap
TBR1 1 dataset
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX19 1 dataset
Motif DE_24h DE_24h-TBX19_MA0804.2 17 bp overlap
TBX2 1 dataset
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX20 2 datasets
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX21 3 datasets
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
ChIP GM12878 ENCFF951HUW 587 bp overlap
TBX3 1 dataset
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
TBX5 2 datasets
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
TBXT 1 dataset
Motif DE_24h DE_24h-TBXT_MA0009.2 16 bp overlap
TCF12 6 datasets
Motif DE_24h DE_24h-TCF12_MA1648.2 7 bp overlap
ChIP GM12878 ENCFF433DMU 341 bp overlap
ChIP GM12878 ENCFF506WWB 257 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 420 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 114 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 197 bp overlap
TCF3 1 dataset
Motif DE_24h DE_24h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_24h DE_24h-TCF4_MA0830.3 8 bp overlap
TCF7 2 datasets
Motif DE_24h DE_24h-TCF7_MA0769.3 7 bp overlap
ChIP breast-organoid_BRCA1-mut GSE113909.TCF7.breast-organoid_BRCA1-mut 266 bp overlap
TCF7L1 1 dataset
Motif DE_24h DE_24h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 3 datasets
Motif DE_24h DE_24h-TCF7L2_MA0523.2 9 bp overlap
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 207 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 228 bp overlap
TFAP2A 1 dataset
Motif DE_24h DE_24h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif DE_24h DE_24h-TFAP2C_MA0814.3 9 bp overlap
TP53 1 dataset
ChIP H9 GSE142050.TP53.H9 400 bp overlap
TRIM22 4 datasets
ChIP GM12878 ENCFF919OMX 407 bp overlap
ChIP GM12878 ENCFF919OMX 190 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 587 bp overlap
ChIP GM12878 ENCSR637QAM.TRIM22.GM12878 408 bp overlap
Tbx6 2 datasets
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
Wt1 1 dataset
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
ZBTB18 1 dataset
Motif DE_24h DE_24h-ZBTB18_MA0698.2 11 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 94 bp overlap
ZBTB40 1 dataset
ChIP GM12878 ENCFF346DYM 458 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 207 bp overlap
ZEB1 3 datasets
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 397 bp overlap
ZFP57 1 dataset
Motif DE_24h DE_24h-ZFP57_MA1583.2 7 bp overlap
ZNF148 1 dataset
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF207 2 datasets
ChIP GM12878 ENCFF153KBD 411 bp overlap
ChIP GM12878 ENCSR117KWH.ZNF207.GM12878 487 bp overlap
ZNF217 3 datasets
ChIP GM12878 ENCFF978IGL 465 bp overlap
ChIP GM12878 ENCFF978IGL 331 bp overlap
ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 307 bp overlap
ZNF281 1 dataset
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ZNF317 1 dataset
Motif DE_24h DE_24h-ZNF317_MA1593.2 8 bp overlap
ZNF320 1 dataset
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
ZNF530 1 dataset
Motif DE_24h DE_24h-ZNF530_MA1981.2 14 bp overlap
ZNF597 1 dataset
ChIP GM12878 GSE97661.ZNF597.GM12878 239 bp overlap
ZNF682 1 dataset
Motif DE_24h DE_24h-ZNF682_MA1599.2 11 bp overlap
ZNF684 1 dataset
Motif DE_24h DE_24h-ZNF684_MA1600.2 14 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 457 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 587 bp overlap
ZNF701 1 dataset
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
ZNF740 1 dataset
Motif DE_24h DE_24h-ZNF740_MA0753.3 10 bp overlap
ZSCAN31 1 dataset
Motif DE_24h DE_24h-ZSCAN31_MA1722.2 18 bp overlap
Zic2 1 dataset
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap