chr5 : 128,674,094 128,674,274
180 bp 104 TFs 0 linked genes
This 180 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:128,669,094 – 128,679,274
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 165 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF836SSR 151 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 120 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 121 bp overlap
CEBPB 2 datasets
ChIP Ishikawa ENCFF010USJ 107 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 180 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 156 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 163 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 180 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCFF003PDY 180 bp overlap
CTCF 2 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 164 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 180 bp overlap
EP300 3 datasets
ChIP Ishikawa ENCFF364ZWT 180 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 180 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 180 bp overlap
ESR1 27 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 180 bp overlap
ChIP Ishikawa GSE99905.ESR1.Ishikawa 179 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 180 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 170 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 180 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 180 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 180 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 180 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 180 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 165 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 180 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 156 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 180 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 180 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 180 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 180 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 180 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 180 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 180 bp overlap
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 180 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 170 bp overlap
ChIP Ishikawa_EnhiE2 GSE99905.ESR1.Ishikawa_EnhiE2 169 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 180 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 180 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 180 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 180 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 180 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 180 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 157 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 180 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 161 bp overlap
FLI1 3 datasets
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 172 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 180 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 180 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 180 bp overlap
ChIP DE DE-FOXA2-2 180 bp overlap
FOXM1 2 datasets
ChIP Ishikawa ENCFF578VDD 180 bp overlap
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 180 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 180 bp overlap
ChIP DE DE-GATA4-2 180 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 180 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 180 bp overlap
ChIP DE DE-GATA6-2 180 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 180 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 180 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 155 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 180 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 180 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 180 bp overlap
ChIP foregut GSE117136.GATA6.foregut 168 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 180 bp overlap
GLI2 1 dataset
ChIP HEK293 ENCFF700EUN 180 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 124 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 180 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 180 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 155 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 180 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 180 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 162 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF5 2 datasets
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 161 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 180 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCFF599UKL 180 bp overlap
MAX 2 datasets
ChIP Ishikawa ENCFF064TDQ 180 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 166 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 180 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 180 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 180 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 180 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 143 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 180 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 180 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 180 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 160 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 180 bp overlap
NR3C1 3 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 180 bp overlap
ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 149 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.NR3C1.Ishikawa_Dex_E2 156 bp overlap
Nanog 1 dataset
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 180 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 180 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 121 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 180 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 154 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 180 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 180 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 180 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 180 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 180 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 180 bp overlap
RAD21 1 dataset
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 180 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 180 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 180 bp overlap
REST 2 datasets
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 79 bp overlap
ChIP neural ENCSR000BTV.REST.neural 137 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 76 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 180 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 166 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 180 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 180 bp overlap
SMARCA4 4 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 180 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 180 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 180 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 180 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 157 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 180 bp overlap
SMARCC1 4 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 149 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 180 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 130 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 180 bp overlap
SMC3 1 dataset
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 102 bp overlap
SOX2 3 datasets
ChIP H9 GSE46837.SOX2.H9 138 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 180 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 180 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 144 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 180 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 180 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SRF 2 datasets
ChIP Ishikawa ENCFF992QXM 180 bp overlap
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 157 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 180 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 140 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 180 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 180 bp overlap
TAF1 1 dataset
ChIP Ishikawa ENCSR000BTO.TAF1.Ishikawa 105 bp overlap
TCF12 3 datasets
ChIP Ishikawa ENCFF467DDW 180 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 180 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 155 bp overlap
TEAD4 4 datasets
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 180 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 174 bp overlap
ChIP Ishikawa ENCFF772OTG 164 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 180 bp overlap
USF1 1 dataset
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 166 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 180 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 180 bp overlap
YY1 4 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 180 bp overlap
ChIP Ishikawa ENCFF505XQX 180 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 180 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 127 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 164 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 180 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 180 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 180 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 180 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 180 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 140 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 180 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 180 bp overlap
ZNF260 1 dataset
ChIP HEK293 GSE76494.ZNF260.HEK293 164 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 105 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 170 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 180 bp overlap
ZNF350 1 dataset
ChIP HEK293 GSE76494.ZNF350.HEK293 115 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 116 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 173 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 180 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 180 bp overlap
ZNF680 1 dataset
ChIP HEK293 GSE76494.ZNF680.HEK293 174 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 180 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 180 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 180 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 180 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 180 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 91 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 180 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap