chr3 : 95,387,781 95,388,051
270 bp 100 TFs 0 linked genes
This 270 bp open chromatin element has no linked target genes and is bound by 100 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:95,382,781 – 95,393,051
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 161 bp overlap
ARID3A 2 datasets
ChIP GM12878 ENCSR725LYT.ARID3A.GM12878 65 bp overlap
ChIP GM12878 ENCSR778UBR.ARID3A.GM12878 92 bp overlap
ARNT 1 dataset
ChIP GM12878 ENCSR590KEQ.ARNT.GM12878 162 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 247 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 152 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 177 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 270 bp overlap
BACH1 2 datasets
ChIP GM12878 ENCFF576UEQ 157 bp overlap
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 95 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 92 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 249 bp overlap
BHLHE40 4 datasets
ChIP GM12878 ENCFF010ZUU 63 bp overlap
ChIP GM12878 ENCFF521IZR 85 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 141 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 147 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 162 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 170 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 270 bp overlap
BRD4 3 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 62 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 69 bp overlap
ChIP hESC GSE33281.BRD4.hESC 90 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 131 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 109 bp overlap
CHD2 2 datasets
ChIP GM12878 ENCFF697XCL 174 bp overlap
ChIP GM12878 ENCSR000DZR.CHD2.GM12878 78 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 123 bp overlap
CTCF 2 datasets
ChIP GM04648 GSE148179.CTCF.GM04648 99 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 168 bp overlap
CUX1 1 dataset
ChIP GM12878 ENCFF064TOM 220 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 163 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 262 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 85 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 50 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 58 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 74 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCFF692SMY 138 bp overlap
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 63 bp overlap
EP300 3 datasets
ChIP GM12878 ENCFF242HCG 204 bp overlap
ChIP GM12878 ENCSR000DZG.EP300.GM12878 145 bp overlap
ChIP GM12878 ENCSR000DZD.EP300.GM12878 111 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 128 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 270 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 251 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 270 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 178 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 149 bp overlap
IKZF1 4 datasets
ChIP GM12878 ENCFF616FJX 270 bp overlap
ChIP GM12878 ENCFF753XDO 192 bp overlap
ChIP GM12878 ENCFF824TGK 220 bp overlap
ChIP GM12878 ENCFF824TGK 226 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 210 bp overlap
ChIP GM12878 ENCFF918AID 147 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 269 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 165 bp overlap
IRF4 6 datasets
ChIP GM12878 ENCFF769ZDL 59 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 166 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 87 bp overlap
ChIP OCI-Ly3 GSE142493.IRF4.OCI-Ly3 156 bp overlap
ChIP OCI-Ly3 GSE56857.IRF4.OCI-Ly3 156 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.IRF4.OCI-Ly3_SHCTR 69 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 64 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 68 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 149 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 270 bp overlap
MAX 3 datasets
ChIP P493-6 GSE42262.MAX.P493-6 189 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 200 bp overlap
ChIP P493-6_CMYC_24H GSE36354.MAX.P493-6_CMYC_24H 178 bp overlap
MAZ 2 datasets
ChIP GM12878 ENCFF404CEP 225 bp overlap
ChIP GM12878 ENCFF453CES 177 bp overlap
MED1 4 datasets
ChIP GM12878 GSE93080.MED1.GM12878 163 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 239 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 83 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 50 bp overlap
MEF2A 2 datasets
ChIP GM12878 ENCFF652BHX 131 bp overlap
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 85 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 155 bp overlap
MEF2C 2 datasets
ChIP GM12878 ENCFF473ASZ 157 bp overlap
ChIP GM12878 ENCSR000BNG.MEF2C.GM12878 71 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 132 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 270 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 264 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 270 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 143 bp overlap
MXI1 1 dataset
ChIP GM12878 ENCFF666NJR 231 bp overlap
MYB 3 datasets
ChIP GM12878 ENCSR819ATC.MYB.GM12878 100 bp overlap
ChIP SEM GSE117864.MYB.SEM 90 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 149 bp overlap
MYC 2 datasets
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 241 bp overlap
ChIP P493-6 GSE77061.MYC.P493-6 237 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 185 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 270 bp overlap
NCOA1 1 dataset
ChIP LS180_125 GSE39277.NCOA1.LS180_125 103 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 166 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 170 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 226 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 121 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 182 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 195 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 91 bp overlap
NR3C1 1 dataset
ChIP GM12878 ENCSR904YPP.NR3C1.GM12878 55 bp overlap
NR4A1 1 dataset
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 122 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 240 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 270 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 83 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 61 bp overlap
PML 1 dataset
ChIP GM12878 ENCSR000BQM.PML.GM12878 67 bp overlap
POU2F2 1 dataset
ChIP GM12878 ENCFF207RKY 108 bp overlap
RAD21 1 dataset
ChIP GM12878 ENCSR000EAC.RAD21.GM12878 75 bp overlap
RAD51 2 datasets
ChIP GM12878 ENCFF916JXQ 123 bp overlap
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 60 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 270 bp overlap
RCOR1 1 dataset
ChIP GM12878 ENCFF982CRX 176 bp overlap
RELA 1 dataset
ChIP GM12878 ENCSR000EAG.RELA.GM12878 99 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 211 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 270 bp overlap
RNF2 1 dataset
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 270 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 85 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 242 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 270 bp overlap
SMAD1 2 datasets
ChIP GM12878 ENCFF130NRZ 133 bp overlap
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 143 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 255 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 216 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 178 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 270 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 236 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 270 bp overlap
SMC3 1 dataset
ChIP GM12878 ENCFF085RLZ 150 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 117 bp overlap
SPI1 5 datasets
ChIP GM12878 ENCFF134LCP 59 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 72 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 195 bp overlap
ChIP RS4-11 GSE71616.SPI1.RS4-11 64 bp overlap
ChIP RS4-11_DEX GSE71616.SPI1.RS4-11_DEX 81 bp overlap
SPIB 3 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 56 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 135 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 173 bp overlap
STAT3 4 datasets
ChIP GM12878 ENCFF098ABL 197 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 240 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 186 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 270 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCFF866POT 159 bp overlap
TBL1XR1 2 datasets
ChIP GM12878 ENCFF409FTM 190 bp overlap
ChIP GM12878 ENCSR000DYZ.TBL1XR1.GM12878 74 bp overlap
TBP 1 dataset
ChIP GM12878 ENCFF571OXR 227 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 243 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 270 bp overlap
TCF12 3 datasets
ChIP GM12878 ENCFF433DMU 111 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 253 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 92 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 167 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 132 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 110 bp overlap
TRIM22 4 datasets
ChIP GM12878 ENCFF919OMX 61 bp overlap
ChIP GM12878 ENCFF919OMX 270 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 270 bp overlap
ChIP GM12878 ENCSR637QAM.TRIM22.GM12878 71 bp overlap
TRIM24 2 datasets
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 270 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 164 bp overlap
WRNIP1 1 dataset
ChIP GM12878 ENCFF384UKU 199 bp overlap
YY1 1 dataset
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 113 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 55 bp overlap
ZFP36 2 datasets
ChIP GM12878 ENCFF234WRG 51 bp overlap
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 130 bp overlap
ZNF24 2 datasets
ChIP GM12878 ENCFF688STO 105 bp overlap
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 66 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 215 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 142 bp overlap