chr3 : 37,772,566 37,773,215
649 bp 103 TFs 0 linked genes
This 649 bp open chromatin element has no linked target genes and is bound by 103 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:37,767,566 – 37,778,215
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 160 bp overlap
ARNT 2 datasets
ChIP GM12878 ENCFF831TWO 505 bp overlap
ChIP GM12878 ENCSR590KEQ.ARNT.GM12878 358 bp overlap
ATF4 3 datasets
Motif DE_24h DE_24h-ATF4_MA0833.3 10 bp overlap
ChIP K-562 ENCSR145TSJ.ATF4.K-562 279 bp overlap
ChIP K562 ENCFF674KTF 457 bp overlap
ATF6 1 dataset
Motif DE_24h DE_24h-ATF6_MA1466.2 13 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 213 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 486 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCFF521IZR 405 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 415 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 457 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 291 bp overlap
BRD2 3 datasets
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 85 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 432 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 242 bp overlap
BRD4 4 datasets
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 243 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 255 bp overlap
ChIP THP-1_iBET-BD1-PMA GSE138084.BRD4.THP-1_iBET-BD1-PMA 282 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 204 bp overlap
CEBPA 7 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 470 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 322 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 319 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 343 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 289 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 418 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 290 bp overlap
CEBPB 8 datasets
ChIP K-562 ENCSR000EHE.CEBPB.K-562 207 bp overlap
ChIP K562 ENCFF189VBN 271 bp overlap
ChIP K562 ENCFF584CTB 525 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 503 bp overlap
ChIP THP-1_NS1-Pam3csk-4h GSE103477.CEBPB.THP-1_NS1-Pam3csk-4h 339 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 383 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 121 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 209 bp overlap
CEBPG 1 dataset
Motif DE_24h DE_24h-CEBPG_MA1636.2 10 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 129 bp overlap
CREB3 1 dataset
Motif DE_24h DE_24h-CREB3_MA0638.2 12 bp overlap
CREB3L1 1 dataset
Motif DE_24h DE_24h-CREB3L1_MA0839.2 13 bp overlap
CTCF 11 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 148 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 174 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 502 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 192 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 275 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 190 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 298 bp overlap
ChIP heart left ventricle ENCFF548XHH 381 bp overlap
ChIP heart left ventricle ENCFF548XHH 219 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 113 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 376 bp overlap
ChIP BLaER1 ENCFF364PUR 271 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 201 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 649 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF167CZS 321 bp overlap
ChIP GM12878 ENCFF813OXE 265 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 274 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 138 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 136 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 413 bp overlap
ESR1 5 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 214 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 228 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 350 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 201 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 294 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 142 bp overlap
EZH2 2 datasets
ChIP T98G GSE112240.EZH2.T98G 320 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 431 bp overlap
FOS 1 dataset
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.FOS.THP-1_eGFP-Pam3csk-4h 305 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 189 bp overlap
GATA4 1 dataset
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 65 bp overlap
GATA6 1 dataset
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 87 bp overlap
GATAD2B 3 datasets
ChIP GM12878 ENCFF781IAU 530 bp overlap
ChIP GM12878 ENCFF781IAU 297 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 649 bp overlap
GFI1 1 dataset
ChIP THP-1 GSE90769.GFI1.THP-1 194 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 163 bp overlap
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
HDAC1 1 dataset
ChIP PC-3_GDC-resist GSE147455.HDAC1.PC-3_GDC-resist 135 bp overlap
HLF 1 dataset
Motif DE_24h DE_24h-HLF_MA0043.4 9 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 508 bp overlap
ChIP GM12878 ENCFF824TGK 649 bp overlap
IKZF2 5 datasets
ChIP GM12878 ENCFF238LYK 579 bp overlap
ChIP GM12878 ENCFF918AID 551 bp overlap
ChIP GM12878 ENCFF918AID 434 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 506 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 473 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 233 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 211 bp overlap
JMJD1C 2 datasets
ChIP NB4 GSE63484.JMJD1C.NB4 132 bp overlap
ChIP THP-1 GSE63484.JMJD1C.THP-1 259 bp overlap
JUN 4 datasets
Motif DE_24h DE_24h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 342 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 468 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 513 bp overlap
KMT2B 2 datasets
ChIP AML GSE112074.KMT2B.AML 192 bp overlap
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 438 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 429 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 514 bp overlap
MEIS1 1 dataset
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 456 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 649 bp overlap
MYB 2 datasets
ChIP THP-1 GSE90769.MYB.THP-1 329 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 332 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 267 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 306 bp overlap
NFIL3 1 dataset
Motif DE_24h DE_24h-NFIL3_MA0025.3 9 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 484 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 559 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 125 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 154 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 330 bp overlap
RAD21 4 datasets
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 250 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 455 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 229 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 385 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 473 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 540 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 79 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 80 bp overlap
RELA 1 dataset
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.RELA.THP-1_eGFP-Pam3csk-4h 272 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 466 bp overlap
RUNX1 2 datasets
ChIP MV4-11 GSE79899.RUNX1.MV4-11 272 bp overlap
ChIP THP-1 GSE79899.RUNX1.THP-1 260 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 223 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 153 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 329 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 432 bp overlap
SMARCA4 2 datasets
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 649 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SMARCB1 2 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 213 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 190 bp overlap
SMARCC1 2 datasets
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 416 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 518 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 389 bp overlap
SPI1 7 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 229 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 221 bp overlap
ChIP GM12878 ENCFF134LCP 297 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 194 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 189 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 77 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
SREBF1 1 dataset
Motif DE_24h DE_24h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_24h DE_24h-SREBF2_MA0596.1 10 bp overlap
SREBP2 1 dataset
ChIP monocyte GSE129202.SREBP2.monocyte 649 bp overlap
SS18 3 datasets
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 649 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 649 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 649 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 212 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 204 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 85 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 421 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 322 bp overlap
TBX1 1 dataset
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX2 1 dataset
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX21 3 datasets
ChIP GM12878 ENCFF951HUW 192 bp overlap
ChIP GM12878 ENCFF951HUW 365 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 635 bp overlap
TBX4 1 dataset
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
TBX5 9 datasets
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
ChIP G296S GSE85628.TBX5.G296S 143 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 143 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 162 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 195 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 270 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 270 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 196 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 267 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCFF433DMU 341 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 97 bp overlap
THRA 1 dataset
Motif DE_24h DE_24h-THRA_MA1969.2 18 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 331 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 244 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 244 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 148 bp overlap
XBP1 1 dataset
Motif DE_24h DE_24h-XBP1_MA0844.2 11 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 261 bp overlap