chr2 : 47,344,491 47,344,760
269 bp 111 TFs 2 linked genes
This 269 bp open chromatin element is linked to EPCAM-DT and BCYRN1 and is bound by 111 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
EPCAM-DT 313 bp At TSS Proximity
BCYRN1 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:47,339,491 – 47,349,760
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 224 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 63 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 115 bp overlap
BAZ2A 2 datasets
ChIP HepG2 ENCFF797RVO 207 bp overlap
ChIP HepG2 ENCFF797RVO 269 bp overlap
BRD2 13 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 94 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA_JQ1 68 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 52 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 80 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 269 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 269 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 64 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 64 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 50 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 50 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 70 bp overlap
ChIP MDA-MB-231_NTsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_NTsiRNA_JQ1 60 bp overlap
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 74 bp overlap
BRD4 13 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 243 bp overlap
ChIP Hep-G2 ENCSR514EOE.BRD4.Hep-G2 54 bp overlap
ChIP HepG2 ENCFF607HXA 269 bp overlap
ChIP HepG2 ENCFF607HXA 146 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 104 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 80 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 71 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 71 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 134 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 109 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 103 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 97 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 194 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 60 bp overlap
CHD1 1 dataset
ChIP H1 ENCFF998XEK 245 bp overlap
CTCF 17 datasets
ChIP 22Rv1 ENCFF466OXN 166 bp overlap
ChIP GM23338 ENCFF531QOI 119 bp overlap
ChIP PC-3 ENCFF487TUI 57 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 59 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 68 bp overlap
ChIP VCaP ENCFF858YQT 60 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 193 bp overlap
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 63 bp overlap
ChIP brain ENCFF067KUH 160 bp overlap
ChIP brain ENCFF099ASU 67 bp overlap
ChIP chondrocyte ENCFF134ORZ 118 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 269 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 57 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR074SFL.CTCF.esophagus_muscularis-mucosa 55 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 141 bp overlap
ChIP heart right ventricle ENCFF725NNJ 85 bp overlap
ChIP nephron ENCFF589HXU 92 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 197 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 269 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 106 bp overlap
E2F6 1 dataset
ChIP A549 ENCFF550XVR 269 bp overlap
E4F1 1 dataset
ChIP GM12878 ENCSR439WAF.E4F1.GM12878 206 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 260 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 112 bp overlap
ERF 1 dataset
ChIP HepG2 ENCFF647PIT 269 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 96 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 68 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 183 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 269 bp overlap
GLIS2 1 dataset
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 269 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF750ZWM 269 bp overlap
HMGXB4 1 dataset
ChIP HepG2 ENCFF032DND 269 bp overlap
HNF4A 1 dataset
ChIP HepG2 ENCFF146SSF 242 bp overlap
HOXB13 1 dataset
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 86 bp overlap
HOXB8 1 dataset
ChIP PANC-1 GSE119930.HOXB8.PANC-1 112 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 104 bp overlap
IRF1 2 datasets
ChIP AsPC-1_IFNg GSE141606.IRF1.AsPC-1_IFNg 70 bp overlap
ChIP AsPC-1_ZBED2-cDNA GSE141606.IRF1.AsPC-1_ZBED2-cDNA 51 bp overlap
IRF9 1 dataset
ChIP HepG2 ENCFF654ZCV 269 bp overlap
JUN 1 dataset
ChIP A549 ENCFF191QZG 115 bp overlap
KAT7 2 datasets
ChIP HepG2 ENCFF613PTN 269 bp overlap
ChIP HepG2 ENCFF613PTN 269 bp overlap
KDM1A 2 datasets
ChIP HepG2 ENCFF240UWG 62 bp overlap
ChIP HepG2 ENCFF240UWG 62 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 269 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 138 bp overlap
KLF16 1 dataset
ChIP HEK293 ENCSR397DQC.KLF16.HEK293 201 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 269 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 269 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCFF599UKL 269 bp overlap
KLF9 3 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 120 bp overlap
ChIP HEK293 ENCFF588INF 133 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 269 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 66 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 149 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 115 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 51 bp overlap
MCRS1 1 dataset
ChIP Hep-G2 GSE97411.MCRS1.Hep-G2 60 bp overlap
MED13 1 dataset
ChIP HepG2 ENCFF143ZBX 111 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 269 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 121 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 69 bp overlap
MLLT1 1 dataset
ChIP K562 ENCFF074XRJ 218 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 83 bp overlap
MYBL2 1 dataset
ChIP HepG2 ENCFF176QIX 216 bp overlap
MYC 2 datasets
ChIP GP5D GSE51234.MYC.GP5D 269 bp overlap
ChIP NB69 GSE138295.MYC.NB69 269 bp overlap
MYCN 5 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 53 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 82 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 80 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 85 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 50 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 86 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCFF875BDB 269 bp overlap
PHF5A 2 datasets
ChIP HepG2 ENCFF054OSA 269 bp overlap
ChIP HepG2 ENCFF054OSA 95 bp overlap
PHF8 3 datasets
ChIP A-549 ENCSR541AOQ.PHF8.A-549 52 bp overlap
ChIP A549 ENCFF815XUD 269 bp overlap
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 92 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 269 bp overlap
POGK 1 dataset
ChIP HepG2 ENCFF029WNT 235 bp overlap
POLR2A 1 dataset
ChIP transverse colon ENCFF840PXT 215 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 91 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 180 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 269 bp overlap
PRDM15 1 dataset
ChIP HepG2 ENCFF259LUZ 115 bp overlap
RBM39 1 dataset
ChIP HepG2 ENCFF801JUH 269 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 269 bp overlap
SATB2 1 dataset
ChIP HepG2 ENCFF749IAK 124 bp overlap
SNAI1 1 dataset
ChIP HepG2 ENCFF017SIW 131 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 98 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 83 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 170 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 197 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 269 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 269 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 269 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 108 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 115 bp overlap
TAF1 4 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 53 bp overlap
ChIP HepG2 ENCFF946IUP 269 bp overlap
ChIP SK-N-SH ENCFF630ERV 117 bp overlap
ChIP liver ENCFF610UQP 66 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 120 bp overlap
TFDP2 1 dataset
ChIP HepG2 ENCFF794WDW 269 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 59 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 175 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 151 bp overlap
ChIP HepG2 ENCFF956MUY 188 bp overlap
ChIP SK-N-SH ENCFF087JSD 230 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 269 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 184 bp overlap
ChIP K562 ENCFF875HLX 95 bp overlap
ZEB1 1 dataset
ChIP PDAC GSE64557.ZEB1.PDAC 269 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 68 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 236 bp overlap
ZFP90 1 dataset
ChIP HepG2 ENCFF409XXV 269 bp overlap
ZGPAT 2 datasets
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 95 bp overlap
ChIP HepG2 ENCFF055YSO 269 bp overlap
ZNF121 1 dataset
ChIP HepG2 ENCFF343YSL 269 bp overlap
ZNF136 1 dataset
ChIP HepG2 ENCFF188PQX 269 bp overlap
ZNF20 2 datasets
ChIP HepG2 ENCFF518BKZ 269 bp overlap
ChIP HepG2 ENCFF518BKZ 175 bp overlap
ZNF264 2 datasets
ChIP HepG2 ENCFF453WJV 269 bp overlap
ChIP HepG2 ENCFF453WJV 106 bp overlap
ZNF275 1 dataset
ChIP HepG2 ENCFF015JKD 269 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 269 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 243 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 269 bp overlap
ZNF384 1 dataset
ChIP HepG2 ENCFF129PLC 76 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 269 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 269 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 251 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 240 bp overlap
ZNF501 2 datasets
ChIP HEK293 ENCSR461ZJT.ZNF501.HEK293 216 bp overlap
ChIP HepG2 ENCFF879XZR 269 bp overlap
ZNF556 1 dataset
ChIP HepG2 ENCFF008WIK 269 bp overlap
ZNF565 1 dataset
ChIP SK-N-SH ENCFF372UGG 261 bp overlap
ZNF646 1 dataset
ChIP HepG2 ENCFF141MBP 123 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 238 bp overlap
ZNF761 1 dataset
ChIP HepG2 ENCFF761IOF 97 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 253 bp overlap
ZNF770 5 datasets
ChIP HEK293 ENCFF468FCG 231 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 263 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 269 bp overlap
ChIP HepG2 ENCFF233UVH 269 bp overlap
ChIP HepG2 ENCFF233UVH 269 bp overlap
ZNF8 1 dataset
ChIP SK-N-SH ENCFF131SMT 176 bp overlap
ZSCAN22 1 dataset
ChIP HepG2 ENCFF246MVE 269 bp overlap