chr2 : 43,996,995 – 43,997,396
401 bp 120 TFs 2 linked genes
This 401 bp open chromatin element is linked to LRPPRC and ENSG00000288707 and is bound by 120 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LRPPRC 1.0 kb Proximal Proximity
ENSG00000288707 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:43,991,995 – 44,002,396
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
120 transcription factors
Source
Cell type
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 177 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 258 bp overlap
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 363 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 125 bp overlap
BCOR 1 dataset
ChIP K562 ENCFF343XWA 197 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 185 bp overlap
BRD4 6 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 228 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 244 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 289 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 235 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 191 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 284 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 108 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 170 bp overlap
CTCF 3 datasets
ChIP GM23338 ENCFF772DML 159 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 193 bp overlap
ChIP HFFc6 ENCFF005CJI 350 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 401 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 78 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 317 bp overlap
ChIP K562 ENCFF739JDE 210 bp overlap
E2F3 1 dataset
ChIP K562 ENCFF922ILX 272 bp overlap
E2F6 5 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 305 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 185 bp overlap
ChIP K562 ENCFF136LTS 313 bp overlap
ChIP K562 ENCFF163WMT 363 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 182 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 254 bp overlap
EHMT2 2 datasets
ChIP HepG2 ENCFF004KYI 224 bp overlap
ChIP K562 ENCFF053BWO 219 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 166 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 159 bp overlap
ChIP DE DE-FOXA2-1 240 bp overlap
FOXO1 1 dataset
ChIP HepG2 ENCFF088FIR 232 bp overlap
FOXO4 1 dataset
ChIP HepG2 ENCFF909ISL 112 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 328 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 169 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA2 1 dataset
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 173 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 318 bp overlap
ChIP DE DE-GATA4-2 276 bp overlap
ChIP foregut GSE117136.GATA4.foregut 256 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 279 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 157 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 316 bp overlap
ChIP DE DE-GATA6-2 367 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 220 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 316 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 275 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 311 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 316 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 191 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 217 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 302 bp overlap
ChIP foregut GSE117136.GATA6.foregut 269 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 347 bp overlap
HLTF 1 dataset
ChIP K562 ENCFF783OCM 135 bp overlap
HMGXB4 1 dataset
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 155 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 242 bp overlap
IRF1 1 dataset
ChIP K562 ENCFF277KTJ 162 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 211 bp overlap
IRF9 1 dataset
ChIP HepG2 ENCFF654ZCV 134 bp overlap
KDM1A 2 datasets
ChIP K562 ENCFF128TYE 113 bp overlap
ChIP K562 ENCFF128TYE 314 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 369 bp overlap
ChIP K562 ENCFF320EQC 401 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF017FTI 186 bp overlap
MAX 7 datasets
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 226 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 223 bp overlap
ChIP HepG2 ENCFF479OHI 401 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 108 bp overlap
ChIP K562 ENCFF110LJS 329 bp overlap
ChIP K562 ENCFF398VJM 401 bp overlap
ChIP K562 ENCFF524IJO 209 bp overlap
MAZ 1 dataset
ChIP HepG2 ENCFF068NYH 401 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 377 bp overlap
ChIP K562 ENCFF140CEX 367 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 209 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 229 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 155 bp overlap
MYC 2 datasets
ChIP K-562 ENCSR000EGJ.MYC.K-562 120 bp overlap
ChIP K562 ENCFF988ZRU 350 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 132 bp overlap
NFE2 1 dataset
ChIP K562 ENCFF047YKA 282 bp overlap
NFKBIZ 1 dataset
ChIP Hep-G2 ENCSR235OVI.NFKBIZ.Hep-G2 141 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF057YFW 232 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 156 bp overlap
NR2C1 1 dataset
ChIP K-562 ENCSR178DEG.NR2C1.K-562 199 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 183 bp overlap
NR4A1 1 dataset
ChIP K562 ENCFF998LHF 310 bp overlap
NRL 1 dataset
ChIP HepG2 ENCFF528PUT 387 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 125 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 149 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 189 bp overlap
PRDM10 1 dataset
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 200 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 210 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 210 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR138FUZ.RNF2.K-562 122 bp overlap
SAFB2 1 dataset
ChIP HepG2 ENCFF196QOW 182 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 401 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 309 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 194 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 292 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF316DFN 371 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 291 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 298 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 149 bp overlap
SUPT5H 2 datasets
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 146 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 69 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 154 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 145 bp overlap
TFDP1 4 datasets
ChIP K562 ENCFF584VSB 168 bp overlap
ChIP K562 ENCFF794ZXJ 128 bp overlap
ChIP K562 ENCFF794ZXJ 331 bp overlap
ChIP K562 ENCFF794ZXJ 401 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 163 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 231 bp overlap
THRAP3 1 dataset
ChIP K562 ENCFF445ZEJ 128 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 116 bp overlap
TRIM24 1 dataset
ChIP K-562 ENCSR907MZR.TRIM24.K-562 321 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 230 bp overlap
USF1 1 dataset
ChIP K562 ENCFF202SFC 327 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 173 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 258 bp overlap
YY1 2 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 241 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 234 bp overlap
ZBTB11 1 dataset
ChIP GM12878 ENCFF431EUZ 192 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 266 bp overlap
ZBTB26 2 datasets
ChIP HepG2 ENCFF492SAJ 192 bp overlap
ChIP HepG2 ENCFF492SAJ 393 bp overlap
ZBTB33 4 datasets
ChIP HepG2 ENCFF778UKV 121 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 401 bp overlap
ChIP K562 ENCFF427SDV 138 bp overlap
ChIP K562 ENCFF875HLX 145 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 394 bp overlap
ZBTB4 1 dataset
ChIP HepG2 ENCFF828GZH 127 bp overlap
ZBTB40 1 dataset
ChIP HepG2 ENCFF130IRD 401 bp overlap
ZBTB7B 1 dataset
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 172 bp overlap
ZC3H4 1 dataset
ChIP HepG2 ENCFF603QUY 224 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 381 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 171 bp overlap
ZKSCAN1 4 datasets
ChIP Hep-G2 ENCSR157CAU.ZKSCAN1.Hep-G2 227 bp overlap
ChIP HepG2 ENCFF578KDY 219 bp overlap
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 333 bp overlap
ChIP K562 ENCFF977CBA 177 bp overlap
ZMYM2 2 datasets
ChIP HepG2 ENCFF575OMW 401 bp overlap
ChIP HepG2 ENCFF575OMW 307 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 95 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 110 bp overlap
ChIP K562 ENCFF361LXT 240 bp overlap
ZNF175 1 dataset
ChIP K562 ENCFF497AEJ 401 bp overlap
ZNF221 1 dataset
ChIP HepG2 ENCFF374BUN 401 bp overlap
ZNF224 2 datasets
ChIP HepG2 ENCFF298FFZ 199 bp overlap
ChIP HepG2 ENCFF298FFZ 398 bp overlap
ZNF274 1 dataset
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 250 bp overlap
ZNF276 1 dataset
ChIP Hep-G2 ENCSR076KLJ.ZNF276.Hep-G2 271 bp overlap
ZNF280B 1 dataset
ChIP HepG2 ENCFF084BYB 330 bp overlap
ZNF316 3 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 339 bp overlap
ChIP K562 ENCFF281INV 237 bp overlap
ChIP K562 ENCFF838QCD 279 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 401 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 201 bp overlap
ZNF414 2 datasets
ChIP HepG2 ENCFF809EHH 134 bp overlap
ChIP HepG2 ENCFF809EHH 333 bp overlap
ZNF430 1 dataset
ChIP HepG2 ENCFF967HQR 401 bp overlap
ZNF44 1 dataset
ChIP Hep-G2 ENCSR914HPP.ZNF44.Hep-G2 203 bp overlap
ZNF441 1 dataset
ChIP HepG2 ENCFF738UDK 58 bp overlap
ZNF501 1 dataset
ChIP HepG2 ENCFF879XZR 163 bp overlap
ZNF571 1 dataset
ChIP HepG2 ENCFF513ZCT 401 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 239 bp overlap
ChIP K562 ENCFF547OSS 365 bp overlap
ZNF605 1 dataset
ChIP HepG2 ENCFF640NFJ 298 bp overlap
ZNF619 2 datasets
ChIP HepG2 ENCFF388NNO 190 bp overlap
ChIP HepG2 ENCFF388NNO 401 bp overlap
ZNF707 1 dataset
ChIP HepG2 ENCFF084AUR 401 bp overlap
ZNF740 1 dataset
ChIP K562 ENCFF447IXE 196 bp overlap
ZNF747 1 dataset
ChIP HepG2 ENCFF528MQU 154 bp overlap
ZNF749 1 dataset
ChIP HepG2 ENCFF992SKL 71 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCFF468FCG 212 bp overlap
ChIP HepG2 ENCFF233UVH 292 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 359 bp overlap
ZNF827 1 dataset
ChIP HepG2 ENCFF591ZUK 201 bp overlap
ZNF879 2 datasets
ChIP HepG2 ENCFF479BKR 298 bp overlap
ChIP HepG2 ENCFF479BKR 401 bp overlap
ZNF883 1 dataset
ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 195 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 185 bp overlap
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