chr15 : 36,270,930 – 36,271,445
515 bp 122 TFs 0 linked genes
This 515 bp open chromatin element has no linked target genes and is bound by 122 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:36,265,930 – 36,276,445
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
122 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 219 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 175 bp overlap
BCL11A 2 datasets
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 130 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 143 bp overlap
BCL11B 1 dataset
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 384 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 364 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 243 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 361 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 264 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 166 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 312 bp overlap
CTBP1 2 datasets
ChIP HEK293T ENCFF003PDY 331 bp overlap
ChIP HEK293T ENCSR237TFX.CTBP1.HEK293T 246 bp overlap
CTNNB1 4 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 281 bp overlap
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 280 bp overlap
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 320 bp overlap
ChIP hiPSC_TT-neg_D2 GSE132532.CTNNB1.hiPSC_TT-neg_D2 173 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 338 bp overlap
DPRX 2 datasets
Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 445 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 155 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_4 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_4 285 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 305 bp overlap
EZH2 4 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 515 bp overlap
ChIP A673 ENCFF790MVL 401 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 108 bp overlap
ChIP neural progenitor cell ENCFF018MKA 515 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 515 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 322 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 388 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 164 bp overlap
FLI1 4 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 336 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 342 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 321 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 367 bp overlap
FOXA1 1 dataset
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 226 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 515 bp overlap
ChIP DE DE-FOXA2-2 515 bp overlap
FOXD3 2 datasets
Motif DE_36h DE_36h-FOXD3_MA0041.3 14 bp overlap
Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 233 bp overlap
Foxj3 2 datasets
Motif DE_36h DE_36h-Foxj3_MA0851.2 9 bp overlap
Motif DE_48h DE_48h-Foxj3_MA0851.2 9 bp overlap
GATA1 2 datasets
Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 515 bp overlap
ChIP DE DE-GATA4-2 515 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 515 bp overlap
ChIP DE DE-GATA6-2 513 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 502 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 464 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 476 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 399 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 512 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 503 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 430 bp overlap
GLI2 2 datasets
ChIP HEK293 ENCFF700EUN 305 bp overlap
ChIP HEK293 ENCSR978EQY.GLI2.HEK293 294 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 498 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 515 bp overlap
GLIS2 2 datasets
Motif DE_48h DE_48h-GLIS2_MA0736.1 14 bp overlap
Motif DE_60h DE_60h-GLIS2_MA0736.1 14 bp overlap
GLIS3 2 datasets
Motif DE_48h DE_48h-GLIS3_MA0737.1 14 bp overlap
Motif DE_60h DE_60h-GLIS3_MA0737.1 14 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 125 bp overlap
HOXA4 2 datasets
Motif DE_36h DE_36h-HOXA4_MA1496.2 7 bp overlap
Motif DE_48h DE_48h-HOXA4_MA1496.2 7 bp overlap
HOXB4 2 datasets
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
HOXC13 2 datasets
Motif DE_48h DE_48h-HOXC13_MA0907.2 9 bp overlap
Motif DE_60h DE_60h-HOXC13_MA0907.2 9 bp overlap
HOXC4 2 datasets
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
Hnf1A 2 datasets
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 226 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 320 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 269 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 288 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 362 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 409 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KLF5 2 datasets
ChIP HEK293 GSE88976.KLF5.HEK293 160 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 190 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 204 bp overlap
LIN54 1 dataset
Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 362 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 363 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 233 bp overlap
NANOG 9 datasets
ChIP H1 ENCFF747ZPQ 105 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 399 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 337 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 314 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 515 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 425 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 457 bp overlap
ChIP hESC GSE18292.NANOG.hESC 376 bp overlap
ChIP hESC GSE20650.NANOG.hESC 301 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 367 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 286 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 355 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 515 bp overlap
Nr2e1 2 datasets
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 405 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 323 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 286 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 177 bp overlap
PHOX2A 2 datasets
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 431 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 452 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 360 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 383 bp overlap
POU6F1 2 datasets
Motif DE_36h DE_36h-POU6F1_MA1549.2 7 bp overlap
Motif DE_48h DE_48h-POU6F1_MA1549.2 7 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 379 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 180 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 227 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 369 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 350 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 503 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 264 bp overlap
PROP1 2 datasets
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
RARA 2 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 252 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 308 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 417 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 378 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 319 bp overlap
SMAD2 2 datasets
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 149 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 417 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 503 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 515 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 499 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 454 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 493 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 443 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 290 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 211 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 225 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 479 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 263 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 387 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 393 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 215 bp overlap
SMC3 1 dataset
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 191 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 316 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 411 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 184 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 356 bp overlap
ChIP hESC GSE18292.SOX2.hESC 107 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 283 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 459 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 130 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 85 bp overlap
SUZ12 1 dataset
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 270 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 399 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 384 bp overlap
TCF7L1 2 datasets
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_48h DE_48h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 4 datasets
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap
ChIP HEK293 ENCFF513JQN 199 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 515 bp overlap
THAP1 1 dataset
Motif DE_60h DE_60h-THAP1_MA0597.3 8 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 332 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 237 bp overlap
VEZF1 2 datasets
Motif DE_48h DE_48h-VEZF1_MA1578.2 6 bp overlap
Motif DE_60h DE_60h-VEZF1_MA1578.2 6 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 383 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 414 bp overlap
YY1 4 datasets
ChIP HEK293 ENCSR859RAO.YY1.HEK293 247 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 242 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 268 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 173 bp overlap
ZBTB21 1 dataset
ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 247 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 311 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 284 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 490 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 301 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 476 bp overlap
ZIC4 2 datasets
Motif DE_48h DE_48h-ZIC4_MA0751.2 14 bp overlap
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_48h DE_48h-ZIC5_MA1584.2 15 bp overlap
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF121 3 datasets
ChIP HEK293 ENCFF839FUF 382 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 312 bp overlap
ChIP HEK293 GSE76494.ZNF121.HEK293 208 bp overlap
ZNF143 1 dataset
ChIP HeLa GSE39263.ZNF143.HeLa 135 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 325 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 258 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 431 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 302 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 57 bp overlap
ZNF331 1 dataset
Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap
ZNF34 1 dataset
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 401 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 333 bp overlap
ZNF423 1 dataset
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 243 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 309 bp overlap
ZNF580 1 dataset
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 354 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 321 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 233 bp overlap
ZNF610 1 dataset
ChIP HEK293 ENCSR691TXI.ZNF610.HEK293 299 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 185 bp overlap
ZNF680 1 dataset
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 216 bp overlap
ZNF768 2 datasets
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 157 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 190 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 414 bp overlap
ZNF85 2 datasets
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 337 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 168 bp overlap
ZSCAN31 1 dataset
Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 357 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 274 bp overlap
Huangfu Lab · Publications · Resources · Contact